RNA–Protein interactions for RNA: ENSMUST00000032168.6

Sec61a1-201, Transcript of Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sec61a1, Length 3,172 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1-201ENSMUST00000032168 Tctex1d4Q8CDY7 219 aa12.81□□□□□ -0.36
Sec61a1-201ENSMUST00000032168 SNORCQ9CXL7 121 aa12.81□□□□□ -0.36
Sec61a1-201ENSMUST00000032168 Cml3Q9JIY8 226 aa12.81□□□□□ -0.36
Sec61a1-201ENSMUST00000032168 Gm28305F6U473 122 aa12.81□□□□□ -0.36
Sec61a1-201ENSMUST00000032168 Gm10226O88253 85 aa12.8□□□□□ -0.36
Sec61a1-201ENSMUST00000032168 Cyyr1Q8VIH7 165 aa12.8□□□□□ -0.36
Sec61a1-201ENSMUST00000032168 Mrpl20Q9CQL4 149 aa12.8□□□□□ -0.36
Sec61a1-201ENSMUST00000032168 Ankrd17Q99NH0 2603 aaKnown RBP12.8□□□□□ -0.36
Sec61a1-201ENSMUST00000032168 Cited2O35740 269 aa12.8□□□□□ -0.36
Sec61a1-201ENSMUST00000032168 P01756 117 aa12.8□□□□□ -0.36
Sec61a1-201ENSMUST00000032168 P01757 117 aa12.8□□□□□ -0.36
Sec61a1-201ENSMUST00000032168 PdpnQ62011 172 aa12.8□□□□□ -0.36
Sec61a1-201ENSMUST00000032168 Rnf185Q91YT2 192 aa12.8□□□□□ -0.36
Sec61a1-201ENSMUST00000032168 Unc79Q0KK59 2596 aa12.8□□□□□ -0.36
Sec61a1-201ENSMUST00000032168 Ndufa4l2Q4FZG9 87 aa12.79□□□□□ -0.36
Sec61a1-201ENSMUST00000032168 Usmg5Q78IK2 58 aa12.79□□□□□ -0.36
Sec61a1-201ENSMUST00000032168 Gtsf1lQ9CWD0 151 aa12.79□□□□□ -0.36
Sec61a1-201ENSMUST00000032168 3110018I06RikQ9CXS0 120 aa12.79□□□□□ -0.36
Sec61a1-201ENSMUST00000032168 Trav19A0A0B4J1K4 119 aa12.79□□□□□ -0.36
Sec61a1-201ENSMUST00000032168 1520401A03RikA0A0J9YVH6 598 aa12.79□□□□□ -0.36
Sec61a1-201ENSMUST00000032168 A0A1Y7VMQ4 148 aa12.79□□□□□ -0.36
Sec61a1-201ENSMUST00000032168 Ighv1-9A0A0A6YW37 117 aa12.79□□□□□ -0.36
Sec61a1-201ENSMUST00000032168 Trav14n-2A0A0G2JDF5 121 aa12.79□□□□□ -0.36
Sec61a1-201ENSMUST00000032168 Gm12845A0A0N4SUM5 588 aa12.79□□□□□ -0.36
Sec61a1-201ENSMUST00000032168 Nutf2P61971 127 aa12.79□□□□□ -0.36
Sec61a1-201ENSMUST00000032168 Gm12888Q3UW77 119 aa12.79□□□□□ -0.36
Sec61a1-201ENSMUST00000032168 Trav2Q5R1I9 109 aa12.79□□□□□ -0.36
Sec61a1-201ENSMUST00000032168 Klhdc1Q80YG3 406 aa12.79□□□□□ -0.36
Sec61a1-201ENSMUST00000032168 Shisa9Q9CZN4 424 aa12.79□□□□□ -0.36
Sec61a1-201ENSMUST00000032168 Cnn3Q9DAW9 330 aaKnown RBP12.79□□□□□ -0.36
Sec61a1-201ENSMUST00000032168 FlnaQ8BTM8 2647 aaKnown RBP12.79□□□□□ -0.36
Sec61a1-201ENSMUST00000032168 Chd6A3KFM7 2711 aa12.78□□□□□ -0.36
Sec61a1-201ENSMUST00000032168 Arid1bE9Q4N7 2244 aa12.78□□□□□ -0.36
Sec61a1-201ENSMUST00000032168 Igkv4-70A0A0B4J1I5 116 aa12.78□□□□□ -0.36
Sec61a1-201ENSMUST00000032168 Rps20P60867 119 aaKnown RBP12.78□□□□□ -0.36
Sec61a1-201ENSMUST00000032168 5730522E02RikQ5SP45 163 aa12.78□□□□□ -0.36
Sec61a1-201ENSMUST00000032168 Khdc1aQ3UWR2 166 aa12.78□□□□□ -0.36
Sec61a1-201ENSMUST00000032168 Olfr975Q8VG91 310 aa12.78□□□□□ -0.36
Sec61a1-201ENSMUST00000032168 Card19Q9D1I2 183 aa12.78□□□□□ -0.36
Sec61a1-201ENSMUST00000032168 Ighv1-82A0A0G2JEU7 117 aa12.77□□□□□ -0.36
Sec61a1-201ENSMUST00000032168 Gm20458E9PXJ7 78 aa12.77□□□□□ -0.36
Sec61a1-201ENSMUST00000032168 Cib3Q0P523 160 aa12.77□□□□□ -0.36
Sec61a1-201ENSMUST00000032168 PdfS4R2K0 231 aa12.77□□□□□ -0.37
Sec61a1-201ENSMUST00000032168 P01801 115 aa12.77□□□□□ -0.37
Sec61a1-201ENSMUST00000032168 Obox1Q9D350 204 aa12.76□□□□□ -0.37
Sec61a1-201ENSMUST00000032168 Q24JP4 165 aa12.76□□□□□ -0.37
Sec61a1-201ENSMUST00000032168 Mast4Q811L6 2618 aa12.75□□□□□ -0.37
Sec61a1-201ENSMUST00000032168 P01739 132 aa12.75□□□□□ -0.37
Sec61a1-201ENSMUST00000032168 7420426K07RikQ3UX66 186 aa12.75□□□□□ -0.37
Sec61a1-201ENSMUST00000032168 Prr3Q811B5 190 aaKnown RBP12.75□□□□□ -0.37
Sec61a1-201ENSMUST00000032168 Q9CX63 252 aa12.75□□□□□ -0.37
Sec61a1-201ENSMUST00000032168 Ssbp1Q9CYR0 152 aaKnown RBP12.75□□□□□ -0.37
Sec61a1-201ENSMUST00000032168 Olfr311Q5NC59 308 aa12.75□□□□□ -0.37
Sec61a1-201ENSMUST00000032168 Hspe1Q64433 102 aaKnown RBP12.75□□□□□ -0.37
Sec61a1-201ENSMUST00000032168 Olfr317Q5NCD6 327 aa12.75□□□□□ -0.37
Sec61a1-201ENSMUST00000032168 Olfr1199Q8VF94 310 aa12.75□□□□□ -0.37
Sec61a1-201ENSMUST00000032168 Klk10Q99M20 278 aa12.75□□□□□ -0.37
Sec61a1-201ENSMUST00000032168 AplnrQ9WV08 377 aa12.75□□□□□ -0.37
Sec61a1-201ENSMUST00000032168 Ighv9-1A0A0B4J1P3 117 aa12.74□□□□□ -0.37
Sec61a1-201ENSMUST00000032168 Gm5819E9PZ96 154 aa12.74□□□□□ -0.37
Sec61a1-201ENSMUST00000032168 Lcn2P11672 200 aa12.74□□□□□ -0.37
Sec61a1-201ENSMUST00000032168 TbpP29037 316 aa12.74□□□□□ -0.37
Sec61a1-201ENSMUST00000032168 MtorQ9JLN9 2549 aa12.74□□□□□ -0.37
Sec61a1-201ENSMUST00000032168 Ighv1-23A0A0A6YVW3 117 aa12.73□□□□□ -0.37
Sec61a1-201ENSMUST00000032168 Sertad4A7DTG3 377 aa12.73□□□□□ -0.37
Sec61a1-201ENSMUST00000032168 AY761185Q5ERI8 94 aa12.73□□□□□ -0.37
Sec61a1-201ENSMUST00000032168 Cox7a2lQ61387 111 aa12.73□□□□□ -0.37
Sec61a1-201ENSMUST00000032168 Megf10Q6DIB5 1147 aa12.73□□□□□ -0.37
Sec61a1-201ENSMUST00000032168 Rif1Q6PR54 2419 aaKnown RBP12.73□□□□□ -0.37
Sec61a1-201ENSMUST00000032168 Igkv4-71A0A0G2JEH0 117 aa12.73□□□□□ -0.37
Sec61a1-201ENSMUST00000032168 Crip3Q6Q6R3 243 aa12.73□□□□□ -0.37
Sec61a1-201ENSMUST00000032168 Gm28038F7BCN9 126 aa12.73□□□□□ -0.37
Sec61a1-201ENSMUST00000032168 P01750 117 aa12.73□□□□□ -0.37
Sec61a1-201ENSMUST00000032168 Atp5iQ06185 71 aaKnown RBP12.73□□□□□ -0.37
Sec61a1-201ENSMUST00000032168 Wfdc2Q9DAU7 174 aa12.73□□□□□ -0.37
Sec61a1-201ENSMUST00000032168 Pmis2Q497Q9 96 aa12.72□□□□□ -0.37
Sec61a1-201ENSMUST00000032168 Atp6v0bQ91V37 205 aa12.72□□□□□ -0.37
Sec61a1-201ENSMUST00000032168 Gm17359A0A0G2JEB7 487 aa12.72□□□□□ -0.37
Sec61a1-201ENSMUST00000032168 Vmn1r216Q8R257 298 aa12.72□□□□□ -0.37
Sec61a1-201ENSMUST00000032168 Trbv17A0A140T8P8 114 aa12.71□□□□□ -0.37
Sec61a1-201ENSMUST00000032168 P01747 120 aa12.71□□□□□ -0.37
Sec61a1-201ENSMUST00000032168 Khdc1cQ4KL78 166 aa12.71□□□□□ -0.37
Sec61a1-201ENSMUST00000032168 Ifitm2Q99J93 144 aa12.71□□□□□ -0.37
Sec61a1-201ENSMUST00000032168 Fmc1Q9CR13 113 aa12.71□□□□□ -0.37
Sec61a1-201ENSMUST00000032168 Gkn1Q9CR36 201 aa12.71□□□□□ -0.37
Sec61a1-201ENSMUST00000032168 Dkk2Q9QYZ8 259 aa12.71□□□□□ -0.37
Sec61a1-201ENSMUST00000032168 Srsf2Q62093 221 aaKnown RBP12.71□□□□□ -0.37
Sec61a1-201ENSMUST00000032168 Wfdc15aQ8BH89 80 aa12.71□□□□□ -0.37
Sec61a1-201ENSMUST00000032168 BsnO88737 3942 aa12.71□□□□□ -0.37
Sec61a1-201ENSMUST00000032168 TshbP12656 138 aa12.71□□□□□ -0.38
Sec61a1-201ENSMUST00000032168 Gm11027G8JL69 66 aa12.7□□□□□ -0.38
Sec61a1-201ENSMUST00000032168 Cacng7P62956 275 aa12.7□□□□□ -0.38
Sec61a1-201ENSMUST00000032168 Trav3-3Q5R1C3 114 aa12.7□□□□□ -0.38
Sec61a1-201ENSMUST00000032168 Olfr312Q7TRZ9 308 aa12.7□□□□□ -0.38
Sec61a1-201ENSMUST00000032168 Nit2Q9JHW2 276 aa12.7□□□□□ -0.38
Sec61a1-201ENSMUST00000032168 Xirp2Q4U4S6 3784 aa12.7□□□□□ -0.38
Sec61a1-201ENSMUST00000032168 Wnk1P83741 2377 aa12.7□□□□□ -0.38
Sec61a1-201ENSMUST00000032168 Ifi27l2bQ8VC49 283 aa12.7□□□□□ -0.38
Sec61a1-201ENSMUST00000032168 RhohQ9D3G9 191 aa12.7□□□□□ -0.38
Sec61a1-201ENSMUST00000032168 Q9DAB9 146 aa12.7□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 44.4 ms