RNA–Protein interactions for RNA: ENSMUST00000013771.14

Trim54-201, Transcript of Tripartite motif-containing protein 54, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Trim54, Length 1,434 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54-201ENSMUST00000013771 Ighv1-12A0A0A6YXJ9 117 aa12.3□□□□□ -0.44
Trim54-201ENSMUST00000013771 Olfr1245A0A1L1SQJ6 307 aa12.3□□□□□ -0.44
Trim54-201ENSMUST00000013771 Zfp983E9PUT0 460 aa12.3□□□□□ -0.44
Trim54-201ENSMUST00000013771 Twist1P26687 206 aa12.3□□□□□ -0.44
Trim54-201ENSMUST00000013771 SelplgQ62170 397 aa12.3□□□□□ -0.44
Trim54-201ENSMUST00000013771 Olfr982Q8VGB3 321 aa12.3□□□□□ -0.44
Trim54-201ENSMUST00000013771 Olfr477Q8VGI6 310 aa12.3□□□□□ -0.44
Trim54-201ENSMUST00000013771 Tomm40Q9QYA2 361 aa12.3□□□□□ -0.44
Trim54-201ENSMUST00000013771 AplnrQ9WV08 377 aa12.3□□□□□ -0.44
Trim54-201ENSMUST00000013771 Trav7n-4A0A075B620 113 aa12.29□□□□□ -0.44
Trim54-201ENSMUST00000013771 Ighv2-3A0A075B696 115 aa12.29□□□□□ -0.44
Trim54-201ENSMUST00000013771 Ctxnd2A0A1B0GQX3 59 aa12.29□□□□□ -0.44
Trim54-201ENSMUST00000013771 Zfp979A2A799 407 aa12.29□□□□□ -0.44
Trim54-201ENSMUST00000013771 Gm10647E9Q8X0 124 aa12.29□□□□□ -0.44
Trim54-201ENSMUST00000013771 Gm4133K9J7G6 307 aa12.29□□□□□ -0.44
Trim54-201ENSMUST00000013771 Vamp5Q9Z2P8 102 aa12.29□□□□□ -0.44
Trim54-201ENSMUST00000013771 Dnah17Q69Z23 4481 aa12.28□□□□□ -0.44
Trim54-201ENSMUST00000013771 Hist1h2bfP10853 126 aa12.28□□□□□ -0.44
Trim54-201ENSMUST00000013771 Saa4P31532 130 aa12.28□□□□□ -0.44
Trim54-201ENSMUST00000013771 Smim9Q3V0X1 137 aa12.28□□□□□ -0.44
Trim54-201ENSMUST00000013771 Fbxl7Q5BJ29 491 aa12.28□□□□□ -0.44
Trim54-201ENSMUST00000013771 Olfr150Q60895 312 aa12.28□□□□□ -0.44
Trim54-201ENSMUST00000013771 Ifna11Q61716 190 aa12.28□□□□□ -0.44
Trim54-201ENSMUST00000013771 Hist1h2bbQ64475 126 aa12.28□□□□□ -0.44
Trim54-201ENSMUST00000013771 Olfr403Q7TRX2 313 aa12.28□□□□□ -0.44
Trim54-201ENSMUST00000013771 Hist1h2bkQ8CGP1 126 aaKnown RBP12.28□□□□□ -0.44
Trim54-201ENSMUST00000013771 Hist1h2bpQ8CGP2 126 aaKnown RBP12.28□□□□□ -0.44
Trim54-201ENSMUST00000013771 Mrpl35Q9CQL6 188 aa12.28□□□□□ -0.44
Trim54-201ENSMUST00000013771 D730001G18RikA0A087WQU7 115 aa12.28□□□□□ -0.44
Trim54-201ENSMUST00000013771 Ighv8-4A0A0A6YW26 117 aa12.28□□□□□ -0.44
Trim54-201ENSMUST00000013771 Olfr715bE9Q725 315 aa12.28□□□□□ -0.44
Trim54-201ENSMUST00000013771 Scgb2a2J3KMP9 96 aa12.28□□□□□ -0.44
Trim54-201ENSMUST00000013771 Snrpd3P62320 126 aaKnown RBP12.28□□□□□ -0.44
Trim54-201ENSMUST00000013771 Pcp4l1Q6W8Q3 68 aa12.28□□□□□ -0.44
Trim54-201ENSMUST00000013771 Olfr1373Q7TQT6 311 aa12.28□□□□□ -0.44
Trim54-201ENSMUST00000013771 Olfr715Q8VG49 315 aa12.28□□□□□ -0.44
Trim54-201ENSMUST00000013771 Mpv17lQ99MS3 194 aa12.28□□□□□ -0.44
Trim54-201ENSMUST00000013771 AhspQ9CY02 102 aa12.28□□□□□ -0.44
Trim54-201ENSMUST00000013771 Igkv4-70A0A0B4J1I5 116 aa12.27□□□□□ -0.45
Trim54-201ENSMUST00000013771 Gm14325A2AW67 498 aa12.27□□□□□ -0.45
Trim54-201ENSMUST00000013771 Klf12O35738 402 aa12.27□□□□□ -0.45
Trim54-201ENSMUST00000013771 Olfr1419Q7TQS2 343 aa12.27□□□□□ -0.45
Trim54-201ENSMUST00000013771 Tmem91Q8C581 172 aa12.27□□□□□ -0.45
Trim54-201ENSMUST00000013771 Q8CF25 301 aa12.27□□□□□ -0.45
Trim54-201ENSMUST00000013771 Chchd1Q9CQA6 118 aa12.27□□□□□ -0.45
Trim54-201ENSMUST00000013771 Trav16A0A075B653 116 aa12.26□□□□□ -0.45
Trim54-201ENSMUST00000013771 1810032O08RikE9PZV8 113 aa12.26□□□□□ -0.45
Trim54-201ENSMUST00000013771 Gm9922Q8C3P1 144 aa12.26□□□□□ -0.45
Trim54-201ENSMUST00000013771 Nrn1Q8CFV4 142 aa12.26□□□□□ -0.45
Trim54-201ENSMUST00000013771 Ifitm2Q99J93 144 aa12.26□□□□□ -0.45
Trim54-201ENSMUST00000013771 Chchd5Q9CQP3 110 aa12.26□□□□□ -0.45
Trim54-201ENSMUST00000013771 Trav14n-3A0A075B645 120 aa12.25□□□□□ -0.45
Trim54-201ENSMUST00000013771 9130204L05RikG3UWB8 92 aa12.25□□□□□ -0.45
Trim54-201ENSMUST00000013771 P01745 121 aa12.25□□□□□ -0.45
Trim54-201ENSMUST00000013771 PigyP0C1P0 71 aa12.25□□□□□ -0.45
Trim54-201ENSMUST00000013771 F2rl1P55086 399 aa12.25□□□□□ -0.45
Trim54-201ENSMUST00000013771 Nutf2P61971 127 aa12.25□□□□□ -0.45
Trim54-201ENSMUST00000013771 Krtap26-1Q9D7N2 215 aa12.25□□□□□ -0.45
Trim54-201ENSMUST00000013771 Them7Q9DCP4 223 aa12.25□□□□□ -0.45
Trim54-201ENSMUST00000013771 Bub3Q9WVA3 326 aa12.25□□□□□ -0.45
Trim54-201ENSMUST00000013771 Obox8V9GWY9 217 aa12.25□□□□□ -0.45
Trim54-201ENSMUST00000013771 Shisal2aA2A9G7 189 aa12.24□□□□□ -0.45
Trim54-201ENSMUST00000013771 TcapO70548 167 aa12.24□□□□□ -0.45
Trim54-201ENSMUST00000013771 Gm16686Q3UMN9 131 aa12.24□□□□□ -0.45
Trim54-201ENSMUST00000013771 H2al1nQ497L1 109 aa12.24□□□□□ -0.45
Trim54-201ENSMUST00000013771 Rhox4eQ504P9 205 aa12.24□□□□□ -0.45
Trim54-201ENSMUST00000013771 Tmem256Q5F285 113 aa12.24□□□□□ -0.45
Trim54-201ENSMUST00000013771 Foxc1Q61572 553 aa12.24□□□□□ -0.45
Trim54-201ENSMUST00000013771 Olfr904Q7TRC9 310 aa12.24□□□□□ -0.45
Trim54-201ENSMUST00000013771 Ifi27Q8C6G0 260 aa12.24□□□□□ -0.45
Trim54-201ENSMUST00000013771 Prelid1Q8R107 217 aa12.24□□□□□ -0.45
Trim54-201ENSMUST00000013771 Mrpl33Q9CQP0 65 aa12.24□□□□□ -0.45
Trim54-201ENSMUST00000013771 Dpm3Q9D1Q4 92 aa12.24□□□□□ -0.45
Trim54-201ENSMUST00000013771 Plekhb2Q9QZC7 221 aa12.24□□□□□ -0.45
Trim54-201ENSMUST00000013771 Trav12d-3A0A075B6A4 115 aa12.23□□□□□ -0.45
Trim54-201ENSMUST00000013771 Ighv1-5A0A0A6YWG2 117 aa12.23□□□□□ -0.45
Trim54-201ENSMUST00000013771 Ighv6-7A0A0A6YWU3 119 aa12.23□□□□□ -0.45
Trim54-201ENSMUST00000013771 Olfr1320A2AHM8 319 aa12.23□□□□□ -0.45
Trim54-201ENSMUST00000013771 Foxi3E0CZH3 425 aa12.23□□□□□ -0.45
Trim54-201ENSMUST00000013771 Vmn1r149E9PWL6 307 aa12.23□□□□□ -0.45
Trim54-201ENSMUST00000013771 Vmn1r101E9Q365 307 aa12.23□□□□□ -0.45
Trim54-201ENSMUST00000013771 Gm15056F6ZR08 88 aa12.23□□□□□ -0.45
Trim54-201ENSMUST00000013771 Vmn1r158G3UY92 307 aa12.23□□□□□ -0.45
Trim54-201ENSMUST00000013771 Sub1P11031 127 aaKnown RBP12.23□□□□□ -0.45
Trim54-201ENSMUST00000013771 Spink11Q09TK7 88 aa12.23□□□□□ -0.45
Trim54-201ENSMUST00000013771 MymxQ2Q5T5 84 aa12.23□□□□□ -0.45
Trim54-201ENSMUST00000013771 Slc17a2Q5SZA1 478 aa12.23□□□□□ -0.45
Trim54-201ENSMUST00000013771 Olfr1381Q7TQT4 311 aa12.23□□□□□ -0.45
Trim54-201ENSMUST00000013771 Ndufv3Q8BK30 104 aaKnown RBP12.23□□□□□ -0.45
Trim54-201ENSMUST00000013771 ChtopQ9CY57 249 aaKnown RBP12.23□□□□□ -0.45
Trim54-201ENSMUST00000013771 Pdzd11Q9CZG9 140 aa12.23□□□□□ -0.45
Trim54-201ENSMUST00000013771 AW011738F6S7Q2 159 aa12.22□□□□□ -0.45
Trim54-201ENSMUST00000013771 Itgb1bp1O35671 200 aa12.22□□□□□ -0.45
Trim54-201ENSMUST00000013771 Atp5iQ06185 71 aaKnown RBP12.22□□□□□ -0.45
Trim54-201ENSMUST00000013771 Megf9Q8BH27 600 aa12.22□□□□□ -0.45
Trim54-201ENSMUST00000013771 Olfr954Q9EQB6 314 aa12.22□□□□□ -0.45
Trim54-201ENSMUST00000013771 Zfp930A0A1D5RM15 441 aa12.21□□□□□ -0.45
Trim54-201ENSMUST00000013771 Tmem141A2AJB2 108 aa12.21□□□□□ -0.45
Trim54-201ENSMUST00000013771 Gm21983D6RFS9 131 aa12.21□□□□□ -0.45
Trim54-201ENSMUST00000013771 Gm5878E9PUB3 99 aa12.21□□□□□ -0.45
Retrieved 100 of 22,080 RNA–protein pairs in 66.2 ms