RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 CASC2Q6XLA1 102 aa8.08□□□□□ -1.12
CLN6-212ENST00000636020 FAM236AA0A1B0GUQ0 79 aa8.07□□□□□ -1.12
CLN6-212ENST00000636020 FAM236BA0A1B0GV22 79 aa8.07□□□□□ -1.12
CLN6-212ENST00000636020 hDV103S1A0JD37 113 aa8.07□□□□□ -1.12
CLN6-212ENST00000636020 TMEM254Q8TBM7 123 aa8.07□□□□□ -1.12
CLN6-212ENST00000636020 MRPL34Q9BQ48 92 aaKnown RBP8.04□□□□□ -1.12
CLN6-212ENST00000636020 LCE1AQ5T7P2 110 aa8.02□□□□□ -1.13
CLN6-212ENST00000636020 SCGB1A1P11684 91 aa8.01□□□□□ -1.13
CLN6-212ENST00000636020 ATOX1O00244 68 aa7.96□□□□□ -1.14
CLN6-212ENST00000636020 SPRR2DP22532 72 aa7.95□□□□□ -1.14
CLN6-212ENST00000636020 OCR1Q9BZK8 76 aa7.95□□□□□ -1.14
CLN6-212ENST00000636020 NDUFS5O43920 106 aa7.92□□□□□ -1.14
CLN6-212ENST00000636020 SMIM20Q8N5G0 67 aa7.9□□□□□ -1.14
CLN6-212ENST00000636020 TP53AIP1Q9HCN2 124 aa7.9□□□□□ -1.14
CLN6-212ENST00000636020 TRAV7A0A075B6U4 112 aa7.89□□□□□ -1.15
CLN6-212ENST00000636020 UQCRQO14949 82 aa7.88□□□□□ -1.15
CLN6-212ENST00000636020 C5orf47Q569G3 176 aa7.87□□□□□ -1.15
CLN6-212ENST00000636020 Q5W150 140 aa7.85□□□□□ -1.15
CLN6-212ENST00000636020 SERP2Q8N6R1 65 aa7.85□□□□□ -1.15
CLN6-212ENST00000636020 ANAPC13Q9BS18 74 aa7.84□□□□□ -1.15
CLN6-212ENST00000636020 KRTAP8-1Q8IUC2 63 aa7.83□□□□□ -1.16
CLN6-212ENST00000636020 TRAV22A0A0B4J277 110 aa7.82□□□□□ -1.16
CLN6-212ENST00000636020 H0Y9P7 68 aa7.8□□□□□ -1.16
CLN6-212ENST00000636020 COX7CP15954 63 aa7.8□□□□□ -1.16
CLN6-212ENST00000636020 LCE3BQ5TA77 95 aa7.8□□□□□ -1.16
CLN6-212ENST00000636020 KLKP1Q107X0 134 aa7.78□□□□□ -1.16
CLN6-212ENST00000636020 DSTQ03001 7570 aaKnown RBP7.75□□□□□ -1.17
CLN6-212ENST00000636020 H3BPC8 53 aa7.74□□□□□ -1.17
CLN6-212ENST00000636020 MP68P56378 58 aa7.74□□□□□ -1.17
CLN6-212ENST00000636020 IGKV2D-30A0A075B6S6 120 aa7.73□□□□□ -1.17
CLN6-212ENST00000636020 IGKV2-30P06310 120 aa7.73□□□□□ -1.17
CLN6-212ENST00000636020 CSAG1Q6PB30 78 aa7.72□□□□□ -1.17
CLN6-212ENST00000636020 LINC00208Q96KT6 92 aa7.72□□□□□ -1.17
CLN6-212ENST00000636020 C20orf197Q8N268 126 aa7.71□□□□□ -1.18
CLN6-212ENST00000636020 LOC101927531A0A1B0GV80 90 aa7.7□□□□□ -1.18
CLN6-212ENST00000636020 C4orf26Q17RF5 130 aa7.7□□□□□ -1.18
CLN6-212ENST00000636020 C1orf64Q8NEQ6 169 aa7.7□□□□□ -1.18
CLN6-212ENST00000636020 CCDC179H3BU77 68 aa7.69□□□□□ -1.18
CLN6-212ENST00000636020 C7orf65Q6ZTY9 151 aa7.69□□□□□ -1.18
CLN6-212ENST00000636020 SNURFQ9Y675 71 aa7.68□□□□□ -1.18
CLN6-212ENST00000636020 PCP4P48539 62 aa7.67□□□□□ -1.18
CLN6-212ENST00000636020 CYP4F30PQ9H0H9 118 aa7.66□□□□□ -1.18
CLN6-212ENST00000636020 S4R3F8 94 aa7.65□□□□□ -1.18
CLN6-212ENST00000636020 CYSTM1Q9H1C7 97 aa7.63□□□□□ -1.19
CLN6-212ENST00000636020 MT1XP80297 61 aa7.61□□□□□ -1.19
CLN6-212ENST00000636020 LCA10Q71F78 164 aa7.61□□□□□ -1.19
CLN6-212ENST00000636020 KRTAP3-1Q9BYR8 98 aa7.61□□□□□ -1.19
CLN6-212ENST00000636020 CRIPTQ9P021 101 aa7.61□□□□□ -1.19
CLN6-212ENST00000636020 PRO2289Q9P1D8 64 aa7.61□□□□□ -1.19
CLN6-212ENST00000636020 KRTAP12-2P59991 146 aa7.58□□□□□ -1.2
CLN6-212ENST00000636020 KRTAP4-8A0A0G2JLE6 195 aa7.56□□□□□ -1.2
CLN6-212ENST00000636020 KRTAP4-8Q9BYQ9 185 aa7.56□□□□□ -1.2
CLN6-212ENST00000636020 H7BZZ5 65 aa7.55□□□□□ -1.2
CLN6-212ENST00000636020 NDUFC1O43677 76 aa7.55□□□□□ -1.2
CLN6-212ENST00000636020 KRTAP4-9Q9BYQ8 210 aa7.5□□□□□ -1.21
CLN6-212ENST00000636020 SPANXA2-OT1Q8N9U9 137 aa7.48□□□□□ -1.21
CLN6-212ENST00000636020 KRTAP3-3Q9BYR6 98 aa7.45□□□□□ -1.22
CLN6-212ENST00000636020 TMEM258P61165 79 aa7.42□□□□□ -1.22
CLN6-212ENST00000636020 DMAC1Q96GE9 116 aa7.4□□□□□ -1.22
CLN6-212ENST00000636020 ATP5EP56381 51 aaPredicted RBP7.37□□□□□ -1.23
CLN6-212ENST00000636020 A8MUN3 132 aa7.36□□□□□ -1.23
CLN6-212ENST00000636020 AHNAK2Q8IVF2 5795 aa7.35□□□□□ -1.23
CLN6-212ENST00000636020 PLAC4Q8WY50 150 aa7.32□□□□□ -1.24
CLN6-212ENST00000636020 HMCN1Q96RW7 5635 aa7.31□□□□□ -1.24
CLN6-212ENST00000636020 ACYP2P14621 99 aa7.29□□□□□ -1.24
CLN6-212ENST00000636020 KRTAP10-7P60409 375 aaPredicted RBP7.24□□□□□ -1.25
CLN6-212ENST00000636020 COA5Q86WW8 74 aa7.24□□□□□ -1.25
CLN6-212ENST00000636020 LCE1DQ5T752 114 aa7.23□□□□□ -1.25
CLN6-212ENST00000636020 KRTAP10-12P60413 245 aa7.21□□□□□ -1.26
CLN6-212ENST00000636020 H0YAA0 97 aa7.2□□□□□ -1.26
CLN6-212ENST00000636020 SERP1Q9Y6X1 66 aa7.18□□□□□ -1.26
CLN6-212ENST00000636020 CHKB-CPT1BH3BT56 60 aa7.15□□□□□ -1.26
CLN6-212ENST00000636020 KRTAP5-10Q6L8G5 202 aa7.14□□□□□ -1.27
CLN6-212ENST00000636020 ADM2Q7Z4H4 148 aa7.1□□□□□ -1.27
CLN6-212ENST00000636020 RPS28P62857 69 aaKnown RBP7.08□□□□□ -1.28
CLN6-212ENST00000636020 SPTSSBQ8NFR3 76 aa7.06□□□□□ -1.28
CLN6-212ENST00000636020 LCE5AQ5TCM9 118 aa7.05□□□□□ -1.28
CLN6-212ENST00000636020 MT4P47944 62 aa7.02□□□□□ -1.29
CLN6-212ENST00000636020 LCE4AQ5TA78 99 aa6.98□□□□□ -1.29
CLN6-212ENST00000636020 KRTAP5-7Q6L8G8 165 aa6.98□□□□□ -1.29
CLN6-212ENST00000636020 R4GN34 69 aa6.97□□□□□ -1.29
CLN6-212ENST00000636020 SMIM26A0A096LP01 95 aa6.96□□□□□ -1.3
CLN6-212ENST00000636020 LINC01558Q9Y6Z2 57 aa6.91□□□□□ -1.3
CLN6-212ENST00000636020 KRTAP19-3Q7Z4W3 81 aa6.9□□□□□ -1.3
CLN6-212ENST00000636020 M0QZ58 72 aa6.89□□□□□ -1.31
CLN6-212ENST00000636020 Q1T7F1 81 aa6.88□□□□□ -1.31
CLN6-212ENST00000636020 KRTAP3-2Q9BYR7 98 aa6.87□□□□□ -1.31
CLN6-212ENST00000636020 P0C880 135 aa6.85□□□□□ -1.31
CLN6-212ENST00000636020 V9GYY9 64 aa6.85□□□□□ -1.31
CLN6-212ENST00000636020 LINC01554Q52M75 96 aa6.83□□□□□ -1.32
CLN6-212ENST00000636020 A0A1B0GU69 56 aa6.82□□□□□ -1.32
CLN6-212ENST00000636020 KRTAP19-7Q3SYF9 63 aa6.81□□□□□ -1.32
CLN6-212ENST00000636020 SEC61GP60059 68 aa6.8□□□□□ -1.32
CLN6-212ENST00000636020 MT1EP04732 61 aa6.79□□□□□ -1.32
CLN6-212ENST00000636020 KRTAP5-3Q6L8H2 238 aa6.78□□□□□ -1.32
CLN6-212ENST00000636020 PRR15LQ9BU68 103 aa6.78□□□□□ -1.32
CLN6-212ENST00000636020 KRTAP4-6Q9BYQ5 205 aa6.76□□□□□ -1.33
CLN6-212ENST00000636020 PSPHP1O15172 72 aa6.73□□□□□ -1.33
CLN6-212ENST00000636020 SPRR5A0A1B0GTR4 108 aa6.72□□□□□ -1.33
CLN6-212ENST00000636020 KRTAP5-4Q6L8H1 288 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms