RNA–Protein interactions for RNA: ENST00000622875.4

EBF1-211, Transcript of early B cell factor 1, humanhuman

TSL 5 BASIC

Gene EBF1, Length 4,430 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-211ENST00000622875 LINC00612Q8N6U2 182 aa3.41□□□□□ -1.86
EBF1-211ENST00000622875 ANAPC11Q9NYG5 84 aa3.41□□□□□ -1.86
EBF1-211ENST00000622875 LPAP08519 4548 aa3.41□□□□□ -1.86
EBF1-211ENST00000622875 SPINK1P00995 79 aa3.41□□□□□ -1.86
EBF1-211ENST00000622875 PRR34Q9NV39 138 aa3.4□□□□□ -1.87
EBF1-211ENST00000622875 Q6ZRN7 208 aaPredicted RBP3.39□□□□□ -1.87
EBF1-211ENST00000622875 C15orf56Q8N910 161 aa3.39□□□□□ -1.87
EBF1-211ENST00000622875 Q6ZSA8 131 aa3.39□□□□□ -1.87
EBF1-211ENST00000622875 A0A1W2PNN7 141 aa3.38□□□□□ -1.87
EBF1-211ENST00000622875 IGFL1Q6UW32 110 aa3.38□□□□□ -1.87
EBF1-211ENST00000622875 SPINK6Q6UWN8 80 aa3.38□□□□□ -1.87
EBF1-211ENST00000622875 KRTAP4-16G5E9R7 235 aaPredicted RBP3.37□□□□□ -1.87
EBF1-211ENST00000622875 MUC17Q685J3 4493 aa3.37□□□□□ -1.87
EBF1-211ENST00000622875 KRTAP3-3Q9BYR6 98 aa3.37□□□□□ -1.87
EBF1-211ENST00000622875 KRTAP3-2Q9BYR7 98 aa3.37□□□□□ -1.87
EBF1-211ENST00000622875 KRTAP11-1Q8IUC1 163 aa3.36□□□□□ -1.87
EBF1-211ENST00000622875 MMP24-AS1A0A0U1RRL7 71 aa3.36□□□□□ -1.87
EBF1-211ENST00000622875 A0A0G2JQZ4 141 aa3.35□□□□□ -1.87
EBF1-211ENST00000622875 RPL37P61927 97 aaKnown RBP3.34□□□□□ -1.87
EBF1-211ENST00000622875 PSORS1C2Q9UIG4 136 aa3.34□□□□□ -1.87
EBF1-211ENST00000622875 KRTAP20-1Q3LI63 56 aa3.33□□□□□ -1.88
EBF1-211ENST00000622875 IGKV2D-30A0A075B6S6 120 aa3.33□□□□□ -1.88
EBF1-211ENST00000622875 IGKV2-30P06310 120 aa3.33□□□□□ -1.88
EBF1-211ENST00000622875 PLAC4Q8WY50 150 aa3.33□□□□□ -1.88
EBF1-211ENST00000622875 KRTAP1-5Q9BYS1 174 aa3.33□□□□□ -1.88
EBF1-211ENST00000622875 Q96NJ1 140 aa3.32□□□□□ -1.88
EBF1-211ENST00000622875 H1FX-AS1Q4G0G2 97 aa3.31□□□□□ -1.88
EBF1-211ENST00000622875 A0A087WTM6 91 aa3.3□□□□□ -1.88
EBF1-211ENST00000622875 KRTAP6-3Q3LI67 103 aa3.3□□□□□ -1.88
EBF1-211ENST00000622875 LINC00304Q8N9R0 145 aa3.3□□□□□ -1.88
EBF1-211ENST00000622875 KRTAP26-1Q6PEX3 210 aa3.3□□□□□ -1.88
EBF1-211ENST00000622875 FAM168BA1KXE4 195 aa3.29□□□□□ -1.88
EBF1-211ENST00000622875 LINC00472Q9H8W2 130 aa3.28□□□□□ -1.88
EBF1-211ENST00000622875 P0C880 135 aa3.28□□□□□ -1.88
EBF1-211ENST00000622875 USH2AO75445 5202 aa3.27□□□□□ -1.89
EBF1-211ENST00000622875 KRTAP10-8P60410 259 aa3.27□□□□□ -1.89
EBF1-211ENST00000622875 NEBP20929 6669 aa3.27□□□□□ -1.89
EBF1-211ENST00000622875 FCGBPQ9Y6R7 5405 aaPredicted RBP3.27□□□□□ -1.89
EBF1-211ENST00000622875 TYMSOSQ8TAI1 123 aa3.24□□□□□ -1.89
EBF1-211ENST00000622875 PP632Q6XCG6 107 aa3.24□□□□□ -1.89
EBF1-211ENST00000622875 GIG44P09565 113 aaPredicted RBP3.23□□□□□ -1.89
EBF1-211ENST00000622875 LINC01556Q5JQF7 62 aa3.23□□□□□ -1.89
EBF1-211ENST00000622875 SPRR1BP22528 89 aa3.22□□□□□ -1.89
EBF1-211ENST00000622875 SPRR1AP35321 89 aa3.22□□□□□ -1.89
EBF1-211ENST00000622875 PRO2289Q9P1D8 64 aa3.22□□□□□ -1.89
EBF1-211ENST00000622875 H3BNG1 76 aa3.21□□□□□ -1.9
EBF1-211ENST00000622875 MACF1Q9UPN3 7388 aaKnown RBP3.2□□□□□ -1.9
EBF1-211ENST00000622875 R4GN34 69 aa3.2□□□□□ -1.9
EBF1-211ENST00000622875 LORP23490 312 aaPredicted RBP3.2□□□□□ -1.9
EBF1-211ENST00000622875 SYNE2Q8WXH0 6885 aaKnown RBP3.19□□□□□ -1.9
EBF1-211ENST00000622875 INE1O15225 51 aa3.19□□□□□ -1.9
EBF1-211ENST00000622875 KRTAP15-1Q3LI76 137 aa3.19□□□□□ -1.9
EBF1-211ENST00000622875 GPR98Q8WXG9 6306 aa3.16□□□□□ -1.9
EBF1-211ENST00000622875 A0A0D9SG42 100 aa3.15□□□□□ -1.91
EBF1-211ENST00000622875 KRTAP10-6P60371 365 aaPredicted RBP3.13□□□□□ -1.91
EBF1-211ENST00000622875 LCE2CQ5TA81 110 aa3.13□□□□□ -1.91
EBF1-211ENST00000622875 SPACA4Q8TDM5 124 aa3.12□□□□□ -1.91
EBF1-211ENST00000622875 KRTAP19-1Q8IUB9 90 aa3.11□□□□□ -1.91
EBF1-211ENST00000622875 LCE2BO14633 110 aa3.09□□□□□ -1.91
EBF1-211ENST00000622875 KRTAP2-3P0C7H8 128 aa3.09□□□□□ -1.91
EBF1-211ENST00000622875 KRTAP2-4Q9BYR9 128 aa3.09□□□□□ -1.91
EBF1-211ENST00000622875 H0YAA0 97 aa3.09□□□□□ -1.91
EBF1-211ENST00000622875 MT1HP80294 61 aa3.07□□□□□ -1.92
EBF1-211ENST00000622875 KRTAP1-4P0C5Y4 121 aa3.05□□□□□ -1.92
EBF1-211ENST00000622875 KRTAP19-2Q3LHN2 52 aa3.03□□□□□ -1.93
EBF1-211ENST00000622875 M0QZ58 72 aa3.01□□□□□ -1.93
EBF1-211ENST00000622875 S4R3F8 94 aa3.01□□□□□ -1.93
EBF1-211ENST00000622875 TPRXLQ17RH7 258 aa2.99□□□□□ -1.93
EBF1-211ENST00000622875 C10orf95Q9H7T3 257 aa2.99□□□□□ -1.93
EBF1-211ENST00000622875 KRTAP19-6Q3LI70 58 aa2.98□□□□□ -1.93
EBF1-211ENST00000622875 MUC12Q9UKN1 5478 aa2.97□□□□□ -1.93
EBF1-211ENST00000622875 KRTAP4-1Q9BYQ7 146 aa2.96□□□□□ -1.94
EBF1-211ENST00000622875 FLGP20930 4061 aaPredicted RBP2.95□□□□□ -1.94
EBF1-211ENST00000622875 KRTAP2-2Q9BYT5 123 aa2.94□□□□□ -1.94
EBF1-211ENST00000622875 KRTAP2-1Q9BYU5 128 aa2.94□□□□□ -1.94
EBF1-211ENST00000622875 M0R2T5 61 aa2.94□□□□□ -1.94
EBF1-211ENST00000622875 C9orf92A6NGG3 77 aa2.92□□□□□ -1.94
EBF1-211ENST00000622875 KRTAP13-3Q3SY46 172 aa2.91□□□□□ -1.94
EBF1-211ENST00000622875 KMT2DO14686 5537 aa2.89□□□□□ -1.95
EBF1-211ENST00000622875 KRTAP5-9P26371 169 aa2.89□□□□□ -1.95
EBF1-211ENST00000622875 KRTAP12-2P59991 146 aa2.86□□□□□ -1.95
EBF1-211ENST00000622875 XP32Q5T750 250 aa2.84□□□□□ -1.96
EBF1-211ENST00000622875 KRTAP9-8Q9BYQ0 159 aa2.83□□□□□ -1.96
EBF1-211ENST00000622875 MDN1Q9NU22 5596 aa2.81□□□□□ -1.96
EBF1-211ENST00000622875 TNP1P09430 55 aa2.81□□□□□ -1.96
EBF1-211ENST00000622875 RPS29P62273 56 aaKnown RBP2.79□□□□□ -1.96
EBF1-211ENST00000622875 OBSCNQ5VST9 7968 aa2.79□□□□□ -1.96
EBF1-211ENST00000622875 KRTAP13-1Q8IUC0 172 aa2.77□□□□□ -1.97
EBF1-211ENST00000622875 KRTAP9-3Q9BYQ3 159 aa2.77□□□□□ -1.97
EBF1-211ENST00000622875 KRTAP19-4Q3LI73 84 aa2.75□□□□□ -1.97
EBF1-211ENST00000622875 KRTAP7-1Q8IUC3 87 aa2.75□□□□□ -1.97
EBF1-211ENST00000622875 KRTAP5-7Q6L8G8 165 aa2.74□□□□□ -1.97
EBF1-211ENST00000622875 AHNAK2Q8IVF2 5795 aa2.72□□□□□ -1.97
EBF1-211ENST00000622875 KRTAP13-4Q3LI77 160 aa2.72□□□□□ -1.97
EBF1-211ENST00000622875 KRTAP12-1P59990 96 aa2.7□□□□□ -1.98
EBF1-211ENST00000622875 KRTAP5-10Q6L8G5 202 aa2.7□□□□□ -1.98
EBF1-211ENST00000622875 MT2AP02795 61 aa2.68□□□□□ -1.98
EBF1-211ENST00000622875 KRTAP13-2Q52LG2 175 aa2.66□□□□□ -1.98
EBF1-211ENST00000622875 MT1FP04733 61 aa2.64□□□□□ -1.99
EBF1-211ENST00000622875 SPRR2EP22531 72 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms