RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 C1orf64Q8NEQ6 169 aa4.23□□□□□ -1.73
CLK1-215ENST00000621181 H3BPC8 53 aa4.22□□□□□ -1.73
CLK1-215ENST00000621181 NDUFB1O75438 58 aa4.21□□□□□ -1.74
CLK1-215ENST00000621181 MP68P56378 58 aa4.2□□□□□ -1.74
CLK1-215ENST00000621181 SPANXA2-OT1Q8N9U9 137 aa4.2□□□□□ -1.74
CLK1-215ENST00000621181 H0Y9P7 68 aa4.19□□□□□ -1.74
CLK1-215ENST00000621181 LINC00208Q96KT6 92 aa4.19□□□□□ -1.74
CLK1-215ENST00000621181 Q1T7F1 81 aa4.18□□□□□ -1.74
CLK1-215ENST00000621181 PRO0628Q9UI54 55 aa4.18□□□□□ -1.74
CLK1-215ENST00000621181 MPLKIPQ8TAP9 179 aa4.17□□□□□ -1.74
CLK1-215ENST00000621181 C8orf17Q9NRJ1 99 aa4.16□□□□□ -1.74
CLK1-215ENST00000621181 A0A1B0GVX0 72 aa4.15□□□□□ -1.75
CLK1-215ENST00000621181 RPL37P61927 97 aaKnown RBP4.15□□□□□ -1.75
CLK1-215ENST00000621181 CD164Q04900 197 aa4.14□□□□□ -1.75
CLK1-215ENST00000621181 TP53AIP1Q9HCN2 124 aa4.14□□□□□ -1.75
CLK1-215ENST00000621181 C1orf195Q5TG92 126 aa4.13□□□□□ -1.75
CLK1-215ENST00000621181 NOTCH2NLQ7Z3S9 236 aa4.13□□□□□ -1.75
CLK1-215ENST00000621181 MRPL34Q9BQ48 92 aaKnown RBP4.11□□□□□ -1.75
CLK1-215ENST00000621181 FLGP20930 4061 aaPredicted RBP4.11□□□□□ -1.75
CLK1-215ENST00000621181 IGHV6-1A0A0B4J1U7 121 aa4.1□□□□□ -1.75
CLK1-215ENST00000621181 Q8N9P0 234 aaPredicted RBP4.1□□□□□ -1.75
CLK1-215ENST00000621181 BRK1Q8WUW1 75 aa4.09□□□□□ -1.75
CLK1-215ENST00000621181 Q5VV11 94 aa4.08□□□□□ -1.76
CLK1-215ENST00000621181 V9GYY9 64 aa4.08□□□□□ -1.76
CLK1-215ENST00000621181 A8MUN3 132 aa4.07□□□□□ -1.76
CLK1-215ENST00000621181 ATP11AUNQ6ZP68 121 aa4.07□□□□□ -1.76
CLK1-215ENST00000621181 COA5Q86WW8 74 aa4.07□□□□□ -1.76
CLK1-215ENST00000621181 PSPHP1O15172 72 aa4.07□□□□□ -1.76
CLK1-215ENST00000621181 Q5W150 140 aa4.07□□□□□ -1.76
CLK1-215ENST00000621181 LOC101927531A0A1B0GV80 90 aa4.05□□□□□ -1.76
CLK1-215ENST00000621181 KRTAP15-1Q3LI76 137 aa4.05□□□□□ -1.76
CLK1-215ENST00000621181 C8orf87E5RJ46 101 aa4.04□□□□□ -1.76
CLK1-215ENST00000621181 HRES1P13985 223 aa4.04□□□□□ -1.76
CLK1-215ENST00000621181 NDUFS5O43920 106 aa4.03□□□□□ -1.76
CLK1-215ENST00000621181 Q75L30 129 aa4.03□□□□□ -1.76
CLK1-215ENST00000621181 KRTAP16-1A8MUX0 517 aa4.02□□□□□ -1.77
CLK1-215ENST00000621181 LINC01558Q9Y6Z2 57 aa4.02□□□□□ -1.77
CLK1-215ENST00000621181 USH2AO75445 5202 aa4.01□□□□□ -1.77
CLK1-215ENST00000621181 A8MU10 97 aa4□□□□□ -1.77
CLK1-215ENST00000621181 PRR15LQ9BU68 103 aa4□□□□□ -1.77
CLK1-215ENST00000621181 LINC00313P59037 77 aa3.98□□□□□ -1.77
CLK1-215ENST00000621181 SSPOA2VEC9 5147 aa3.98□□□□□ -1.77
CLK1-215ENST00000621181 CHKB-CPT1BH3BT56 60 aa3.98□□□□□ -1.77
CLK1-215ENST00000621181 LCA10Q71F78 164 aa3.98□□□□□ -1.77
CLK1-215ENST00000621181 FCGBPQ9Y6R7 5405 aaPredicted RBP3.97□□□□□ -1.77
CLK1-215ENST00000621181 IGKV2-30P06310 120 aa3.97□□□□□ -1.77
CLK1-215ENST00000621181 DMAC1Q96GE9 116 aa3.97□□□□□ -1.77
CLK1-215ENST00000621181 MT2AP02795 61 aa3.95□□□□□ -1.78
CLK1-215ENST00000621181 C20orf166-AS1Q96NR2 134 aa3.95□□□□□ -1.78
CLK1-215ENST00000621181 MT1FP04733 61 aa3.93□□□□□ -1.78
CLK1-215ENST00000621181 ACYP2P14621 99 aa3.93□□□□□ -1.78
CLK1-215ENST00000621181 KRTAP10-10P60014 251 aa3.93□□□□□ -1.78
CLK1-215ENST00000621181 CDC42SE1Q9NRR8 79 aa3.93□□□□□ -1.78
CLK1-215ENST00000621181 A8MUU9 505 aa3.92□□□□□ -1.78
CLK1-215ENST00000621181 A6NED7 52 aa3.91□□□□□ -1.78
CLK1-215ENST00000621181 SPINK7P58062 85 aa3.91□□□□□ -1.78
CLK1-215ENST00000621181 PMAIP1Q13794 54 aa3.91□□□□□ -1.78
CLK1-215ENST00000621181 RBM12B-AS1Q9P1G2 102 aa3.9□□□□□ -1.79
CLK1-215ENST00000621181 A6NN06 94 aa3.89□□□□□ -1.79
CLK1-215ENST00000621181 MACF1Q9UPN3 7388 aaKnown RBP3.89□□□□□ -1.79
CLK1-215ENST00000621181 IGKV2D-30A0A075B6S6 120 aa3.87□□□□□ -1.79
CLK1-215ENST00000621181 SYNE2Q8WXH0 6885 aaKnown RBP3.87□□□□□ -1.79
CLK1-215ENST00000621181 KRTAP19-6Q3LI70 58 aa3.84□□□□□ -1.8
CLK1-215ENST00000621181 SPTSSBQ8NFR3 76 aa3.84□□□□□ -1.8
CLK1-215ENST00000621181 KTN1-AS1Q86SY8 53 aa3.82□□□□□ -1.8
CLK1-215ENST00000621181 SPATA8Q6RVD6 105 aa3.81□□□□□ -1.8
CLK1-215ENST00000621181 C7orf65Q6ZTY9 151 aa3.81□□□□□ -1.8
CLK1-215ENST00000621181 A0A1B0GU69 56 aa3.8□□□□□ -1.8
CLK1-215ENST00000621181 KRTAP6-3Q3LI67 103 aa3.79□□□□□ -1.8
CLK1-215ENST00000621181 SEC61GP60059 68 aa3.77□□□□□ -1.81
CLK1-215ENST00000621181 UQCR11O14957 56 aa3.74□□□□□ -1.81
CLK1-215ENST00000621181 MIR22HGQ0VDD5 57 aa3.74□□□□□ -1.81
CLK1-215ENST00000621181 H0YAA0 97 aa3.67□□□□□ -1.82
CLK1-215ENST00000621181 ADM2Q7Z4H4 148 aa3.66□□□□□ -1.82
CLK1-215ENST00000621181 PRAC1Q96KF2 57 aa3.65□□□□□ -1.82
CLK1-215ENST00000621181 KRTAP20-1Q3LI63 56 aa3.63□□□□□ -1.83
CLK1-215ENST00000621181 H1FX-AS1Q4G0G2 97 aa3.63□□□□□ -1.83
CLK1-215ENST00000621181 A0A1B0GU33 70 aa3.62□□□□□ -1.83
CLK1-215ENST00000621181 NEBP20929 6669 aa3.59□□□□□ -1.83
CLK1-215ENST00000621181 MUC12Q9UKN1 5478 aa3.59□□□□□ -1.83
CLK1-215ENST00000621181 CSAG1Q6PB30 78 aa3.54□□□□□ -1.84
CLK1-215ENST00000621181 MT1BP07438 61 aa3.54□□□□□ -1.84
CLK1-215ENST00000621181 KRTAP5-9P26371 169 aa3.54□□□□□ -1.84
CLK1-215ENST00000621181 KRTAP13-4Q3LI77 160 aa3.53□□□□□ -1.84
CLK1-215ENST00000621181 LINC01554Q52M75 96 aa3.53□□□□□ -1.84
CLK1-215ENST00000621181 KRTAP10-5P60370 271 aa3.51□□□□□ -1.85
CLK1-215ENST00000621181 S4R3F8 94 aa3.5□□□□□ -1.85
CLK1-215ENST00000621181 KMT2DO14686 5537 aa3.49□□□□□ -1.85
CLK1-215ENST00000621181 KRTAP19-8Q3LI54 63 aa3.49□□□□□ -1.85
CLK1-215ENST00000621181 SPRR2GQ9BYE4 73 aa3.49□□□□□ -1.85
CLK1-215ENST00000621181 KRTAP25-1Q3LHN0 102 aa3.48□□□□□ -1.85
CLK1-215ENST00000621181 MDN1Q9NU22 5596 aa3.48□□□□□ -1.85
CLK1-215ENST00000621181 P0C880 135 aa3.47□□□□□ -1.85
CLK1-215ENST00000621181 KRTAP2-3P0C7H8 128 aa3.47□□□□□ -1.85
CLK1-215ENST00000621181 LCE1AQ5T7P2 110 aa3.47□□□□□ -1.85
CLK1-215ENST00000621181 KRTAP2-4Q9BYR9 128 aa3.47□□□□□ -1.85
CLK1-215ENST00000621181 K7ERS5 55 aa3.44□□□□□ -1.86
CLK1-215ENST00000621181 ROMO1P60602 79 aa3.43□□□□□ -1.86
CLK1-215ENST00000621181 SPRR2EP22531 72 aa3.41□□□□□ -1.86
CLK1-215ENST00000621181 SPRR2BP35325 72 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms