RNA–Protein interactions for RNA: ENST00000615517.4

MUC1-227, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 951 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-227ENST00000615517 HIST1H2BKO60814 126 aa2.6□□□□□ -1.99
MUC1-227ENST00000615517 HIST1H2BJP06899 126 aa2.6□□□□□ -1.99
MUC1-227ENST00000615517 PDE6GP18545 87 aa2.6□□□□□ -1.99
MUC1-227ENST00000615517 HIST1H2BOP23527 126 aa2.6□□□□□ -1.99
MUC1-227ENST00000615517 HIST1H2BBP33778 126 aa2.6□□□□□ -1.99
MUC1-227ENST00000615517 HIST1H2BDP58876 126 aa2.6□□□□□ -1.99
MUC1-227ENST00000615517 HIST1H2BCP62807 126 aa2.6□□□□□ -1.99
MUC1-227ENST00000615517 HIST2H2BEQ16778 126 aa2.6□□□□□ -1.99
MUC1-227ENST00000615517 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.6□□□□□ -1.99
MUC1-227ENST00000615517 HIST1H2BHQ93079 126 aa2.6□□□□□ -1.99
MUC1-227ENST00000615517 HIST1H2BNQ99877 126 aa2.6□□□□□ -1.99
MUC1-227ENST00000615517 HIST1H2BMQ99879 126 aa2.6□□□□□ -1.99
MUC1-227ENST00000615517 KRTAP19-7Q3SYF9 63 aa2.59□□□□□ -1.99
MUC1-227ENST00000615517 CYSTM1Q9H1C7 97 aa2.59□□□□□ -1.99
MUC1-227ENST00000615517 A0A0B4J2C4 111 aa2.58□□□□□ -2
MUC1-227ENST00000615517 H3BQ85 93 aa2.58□□□□□ -2
MUC1-227ENST00000615517 PYY3Q5JQD4 70 aa2.58□□□□□ -2
MUC1-227ENST00000615517 H0YAA0 97 aa2.57□□□□□ -2
MUC1-227ENST00000615517 DNAL4O96015 105 aa2.57□□□□□ -2
MUC1-227ENST00000615517 MT1EP04732 61 aa2.57□□□□□ -2
MUC1-227ENST00000615517 COA6Q5JTJ3 125 aaKnown RBP2.56□□□□□ -2
MUC1-227ENST00000615517 AHNAKQ09666 5890 aaKnown RBP2.54□□□□□ -2
MUC1-227ENST00000615517 C9JAW5 83 aa2.54□□□□□ -2
MUC1-227ENST00000615517 SCGB1A1P11684 91 aa2.54□□□□□ -2
MUC1-227ENST00000615517 ADM2Q7Z4H4 148 aa2.54□□□□□ -2
MUC1-227ENST00000615517 CEND1Q8N111 149 aa2.54□□□□□ -2
MUC1-227ENST00000615517 FAM240AA0A1B0GVK7 77 aa2.53□□□□□ -2
MUC1-227ENST00000615517 HCG22E2RYF7 251 aa2.53□□□□□ -2
MUC1-227ENST00000615517 PRO1854Q9UHT4 67 aa2.53□□□□□ -2
MUC1-227ENST00000615517 M0R143 59 aa2.5□□□□□ -2.01
MUC1-227ENST00000615517 MT1GP13640 62 aa2.5□□□□□ -2.01
MUC1-227ENST00000615517 KRTAP20-2Q3LI61 65 aa2.5□□□□□ -2.01
MUC1-227ENST00000615517 HIST3H2BBQ8N257 126 aa2.5□□□□□ -2.01
MUC1-227ENST00000615517 MUC5BQ9HC84 5762 aaPredicted RBP2.49□□□□□ -2.01
MUC1-227ENST00000615517 TSTD3H0UI37 97 aa2.49□□□□□ -2.01
MUC1-227ENST00000615517 COX8AP10176 69 aa2.49□□□□□ -2.01
MUC1-227ENST00000615517 CAMK2N1Q7Z7J9 78 aa2.49□□□□□ -2.01
MUC1-227ENST00000615517 R4GN34 69 aa2.49□□□□□ -2.01
MUC1-227ENST00000615517 MUC5ACP98088 5654 aa2.49□□□□□ -2.01
MUC1-227ENST00000615517 A0A1B0GW54 56 aa2.48□□□□□ -2.01
MUC1-227ENST00000615517 NREPQ16612 68 aa2.48□□□□□ -2.01
MUC1-227ENST00000615517 MT1MQ8N339 61 aa2.48□□□□□ -2.01
MUC1-227ENST00000615517 KRTAP4-3Q9BYR4 195 aa2.48□□□□□ -2.01
MUC1-227ENST00000615517 PSPHP1O15172 72 aa2.47□□□□□ -2.01
MUC1-227ENST00000615517 CASC2Q6XLA1 102 aa2.47□□□□□ -2.01
MUC1-227ENST00000615517 LOC110117498A0A087WWA1 95 aa2.46□□□□□ -2.02
MUC1-227ENST00000615517 M0QZ58 72 aa2.46□□□□□ -2.02
MUC1-227ENST00000615517 PSMB2P49721 201 aa2.46□□□□□ -2.02
MUC1-227ENST00000615517 FXYD2P54710 66 aa2.46□□□□□ -2.02
MUC1-227ENST00000615517 KRTAP5-11Q6L8G4 156 aa2.46□□□□□ -2.02
MUC1-227ENST00000615517 HIST1H2BLQ99880 126 aa2.46□□□□□ -2.02
MUC1-227ENST00000615517 SMIM26A0A096LP01 95 aa2.45□□□□□ -2.02
MUC1-227ENST00000615517 BAALC-AS2P0C853 105 aa2.45□□□□□ -2.02
MUC1-227ENST00000615517 P0C880 135 aa2.45□□□□□ -2.02
MUC1-227ENST00000615517 S100A2P29034 98 aa2.45□□□□□ -2.02
MUC1-227ENST00000615517 LINC01554Q52M75 96 aa2.45□□□□□ -2.02
MUC1-227ENST00000615517 HIGD1BQ9P298 99 aa2.45□□□□□ -2.02
MUC1-227ENST00000615517 NDUFC1O43677 76 aa2.44□□□□□ -2.02
MUC1-227ENST00000615517 COL5A1-AS1Q5SY13 56 aa2.44□□□□□ -2.02
MUC1-227ENST00000615517 PP632Q6XCG6 107 aa2.44□□□□□ -2.02
MUC1-227ENST00000615517 Q8N9L7 120 aa2.44□□□□□ -2.02
MUC1-227ENST00000615517 K7ERJ3 54 aa2.43□□□□□ -2.02
MUC1-227ENST00000615517 K7ERU9 68 aa2.42□□□□□ -2.02
MUC1-227ENST00000615517 COX6CP09669 75 aa2.42□□□□□ -2.02
MUC1-227ENST00000615517 PRO0628Q9UI54 55 aa2.42□□□□□ -2.02
MUC1-227ENST00000615517 C14orf132Q9NPU4 83 aa2.41□□□□□ -2.02
MUC1-227ENST00000615517 JMJD7-PLA2G4BH0Y9G9 81 aa2.4□□□□□ -2.03
MUC1-227ENST00000615517 BPY2O14599 106 aa2.4□□□□□ -2.03
MUC1-227ENST00000615517 K7EP34 96 aa2.39□□□□□ -2.03
MUC1-227ENST00000615517 TAX1BP3O14907 124 aa2.39□□□□□ -2.03
MUC1-227ENST00000615517 KRTAP19-5Q3LI72 72 aa2.39□□□□□ -2.03
MUC1-227ENST00000615517 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.39□□□□□ -2.03
MUC1-227ENST00000615517 MT3P25713 68 aa2.38□□□□□ -2.03
MUC1-227ENST00000615517 MT1LQ93083 61 aa2.38□□□□□ -2.03
MUC1-227ENST00000615517 CYP4F30PQ9H0H9 118 aa2.38□□□□□ -2.03
MUC1-227ENST00000615517 SPATA45Q537H7 98 aa2.37□□□□□ -2.03
MUC1-227ENST00000615517 LCE1EQ5T753 118 aa2.37□□□□□ -2.03
MUC1-227ENST00000615517 KRTAP5-8O75690 187 aa2.36□□□□□ -2.03
MUC1-227ENST00000615517 HSD52Q0P140 79 aa2.36□□□□□ -2.03
MUC1-227ENST00000615517 SMIM20Q8N5G0 67 aa2.36□□□□□ -2.03
MUC1-227ENST00000615517 SCGB1C2P0DMR2 95 aa2.35□□□□□ -2.03
MUC1-227ENST00000615517 RPS28P62857 69 aaKnown RBP2.35□□□□□ -2.03
MUC1-227ENST00000615517 VAMP8Q9BV40 100 aa2.35□□□□□ -2.03
MUC1-227ENST00000615517 C20orf197Q8N268 126 aa2.34□□□□□ -2.03
MUC1-227ENST00000615517 UQCR10Q9UDW1 63 aa2.34□□□□□ -2.03
MUC1-227ENST00000615517 KRTAP5-5Q701N2 237 aaPredicted RBP2.33□□□□□ -2.04
MUC1-227ENST00000615517 SYNE1Q8NF91 8797 aaKnown RBP2.33□□□□□ -2.04
MUC1-227ENST00000615517 KRTAP12-4P60329 112 aa2.32□□□□□ -2.04
MUC1-227ENST00000615517 ANAPC13Q9BS18 74 aa2.32□□□□□ -2.04
MUC1-227ENST00000615517 BATFQ16520 125 aa2.31□□□□□ -2.04
MUC1-227ENST00000615517 MP68P56378 58 aa2.3□□□□□ -2.04
MUC1-227ENST00000615517 ATXN8Q156A1 80 aa2.3□□□□□ -2.04
MUC1-227ENST00000615517 TP53AIP1Q9HCN2 124 aa2.3□□□□□ -2.04
MUC1-227ENST00000615517 PRO0461Q9UI25 63 aa2.3□□□□□ -2.04
MUC1-227ENST00000615517 A0A1W2PPM0 123 aa2.29□□□□□ -2.04
MUC1-227ENST00000615517 CCDC179H3BU77 68 aa2.29□□□□□ -2.04
MUC1-227ENST00000615517 NAA38Q9BRA0 125 aaKnown RBP2.29□□□□□ -2.04
MUC1-227ENST00000615517 MT-ATP8P03928 68 aa2.28□□□□□ -2.04
MUC1-227ENST00000615517 ACYP1P07311 99 aa2.28□□□□□ -2.04
MUC1-227ENST00000615517 GTF2H5Q6ZYL4 71 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms