RNA–Protein interactions for RNA: ENST00000613524.4

SYCP1-209, Transcript of synaptonemal complex protein 1, humanhuman

TSL 1 (best) BASIC

Gene SYCP1, Length 3,034 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-209ENST00000613524 SPRR1BP22528 89 aa2.79□□□□□ -1.96
SYCP1-209ENST00000613524 LINC00472Q9H8W2 130 aa2.79□□□□□ -1.96
SYCP1-209ENST00000613524 PSPHP1O15172 72 aa2.78□□□□□ -1.96
SYCP1-209ENST00000613524 LUZP6Q538Z0 58 aa2.78□□□□□ -1.96
SYCP1-209ENST00000613524 PRR15Q8IV56 129 aa2.78□□□□□ -1.96
SYCP1-209ENST00000613524 NDUFB1O75438 58 aa2.78□□□□□ -1.96
SYCP1-209ENST00000613524 LINC00208Q96KT6 92 aa2.78□□□□□ -1.96
SYCP1-209ENST00000613524 A8MWP4 228 aa2.77□□□□□ -1.97
SYCP1-209ENST00000613524 CASC2Q6XLA1 102 aa2.77□□□□□ -1.97
SYCP1-209ENST00000613524 Q8N9P0 234 aaPredicted RBP2.77□□□□□ -1.97
SYCP1-209ENST00000613524 H0Y9P7 68 aa2.77□□□□□ -1.97
SYCP1-209ENST00000613524 MP68P56378 58 aa2.77□□□□□ -1.97
SYCP1-209ENST00000613524 SPANXA2-OT1Q8N9U9 137 aa2.77□□□□□ -1.97
SYCP1-209ENST00000613524 H3BPC8 53 aa2.76□□□□□ -1.97
SYCP1-209ENST00000613524 SPINK1P00995 79 aa2.76□□□□□ -1.97
SYCP1-209ENST00000613524 LINC00313P59037 77 aa2.76□□□□□ -1.97
SYCP1-209ENST00000613524 PMAIP1Q13794 54 aa2.76□□□□□ -1.97
SYCP1-209ENST00000613524 LINC00483Q53H64 154 aa2.76□□□□□ -1.97
SYCP1-209ENST00000613524 MMP24-AS1A0A0U1RRL7 71 aa2.76□□□□□ -1.97
SYCP1-209ENST00000613524 A8MUN3 132 aa2.76□□□□□ -1.97
SYCP1-209ENST00000613524 SSBP3-AS1Q7Z2R9 100 aa2.76□□□□□ -1.97
SYCP1-209ENST00000613524 FSIP2Q5CZC0 6907 aa2.75□□□□□ -1.97
SYCP1-209ENST00000613524 A8MU10 97 aa2.75□□□□□ -1.97
SYCP1-209ENST00000613524 ASB16-AS1Q495Z4 193 aa2.75□□□□□ -1.97
SYCP1-209ENST00000613524 Q5VV11 94 aa2.75□□□□□ -1.97
SYCP1-209ENST00000613524 Q96NJ1 140 aa2.75□□□□□ -1.97
SYCP1-209ENST00000613524 SPAG11AQ6PDA7 123 aa2.74□□□□□ -1.97
SYCP1-209ENST00000613524 A6NED7 52 aa2.74□□□□□ -1.97
SYCP1-209ENST00000613524 A0A1B0GVX0 72 aa2.74□□□□□ -1.97
SYCP1-209ENST00000613524 LIMD2Q9BT23 127 aa2.73□□□□□ -1.97
SYCP1-209ENST00000613524 PCOTHQ58A44 107 aa2.73□□□□□ -1.97
SYCP1-209ENST00000613524 COA5Q86WW8 74 aa2.72□□□□□ -1.97
SYCP1-209ENST00000613524 LOC101927531A0A1B0GV80 90 aa2.7□□□□□ -1.98
SYCP1-209ENST00000613524 PRR15LQ9BU68 103 aa2.7□□□□□ -1.98
SYCP1-209ENST00000613524 KRTAP13-3Q3SY46 172 aa2.7□□□□□ -1.98
SYCP1-209ENST00000613524 CHKB-CPT1BH3BT56 60 aa2.69□□□□□ -1.98
SYCP1-209ENST00000613524 LCA10Q71F78 164 aa2.69□□□□□ -1.98
SYCP1-209ENST00000613524 TP53AIP1Q9HCN2 124 aa2.69□□□□□ -1.98
SYCP1-209ENST00000613524 COX6B2Q6YFQ2 88 aa2.68□□□□□ -1.98
SYCP1-209ENST00000613524 HRES1P13985 223 aa2.68□□□□□ -1.98
SYCP1-209ENST00000613524 TPRXLQ17RH7 258 aa2.68□□□□□ -1.98
SYCP1-209ENST00000613524 KRTAP4-1Q9BYQ7 146 aa2.67□□□□□ -1.98
SYCP1-209ENST00000613524 LINC01558Q9Y6Z2 57 aa2.67□□□□□ -1.98
SYCP1-209ENST00000613524 MRPL34Q9BQ48 92 aaKnown RBP2.67□□□□□ -1.98
SYCP1-209ENST00000613524 Q5W150 140 aa2.66□□□□□ -1.98
SYCP1-209ENST00000613524 M0R2T5 61 aa2.66□□□□□ -1.98
SYCP1-209ENST00000613524 A6NN06 94 aa2.65□□□□□ -1.99
SYCP1-209ENST00000613524 ATP11AUNQ6ZP68 121 aa2.65□□□□□ -1.99
SYCP1-209ENST00000613524 CDC42SE1Q9NRR8 79 aa2.65□□□□□ -1.99
SYCP1-209ENST00000613524 SPINK7P58062 85 aa2.64□□□□□ -1.99
SYCP1-209ENST00000613524 CAMK2N1Q7Z7J9 78 aa2.64□□□□□ -1.99
SYCP1-209ENST00000613524 SPTSSBQ8NFR3 76 aa2.63□□□□□ -1.99
SYCP1-209ENST00000613524 KTN1-AS1Q86SY8 53 aa2.63□□□□□ -1.99
SYCP1-209ENST00000613524 LCE1FQ5T754 118 aa2.61□□□□□ -1.99
SYCP1-209ENST00000613524 RPS29P62273 56 aaKnown RBP2.6□□□□□ -1.99
SYCP1-209ENST00000613524 A8MUU9 505 aa2.6□□□□□ -1.99
SYCP1-209ENST00000613524 RPL37P61927 97 aaKnown RBP2.6□□□□□ -1.99
SYCP1-209ENST00000613524 DMAC1Q96GE9 116 aa2.6□□□□□ -1.99
SYCP1-209ENST00000613524 ACYP2P14621 99 aa2.59□□□□□ -2
SYCP1-209ENST00000613524 MUC17Q685J3 4493 aa2.58□□□□□ -2
SYCP1-209ENST00000613524 C7orf65Q6ZTY9 151 aa2.58□□□□□ -2
SYCP1-209ENST00000613524 LCE1AQ5T7P2 110 aa2.55□□□□□ -2
SYCP1-209ENST00000613524 SPATA8Q6RVD6 105 aa2.55□□□□□ -2
SYCP1-209ENST00000613524 A0A1B0GU69 56 aa2.53□□□□□ -2
SYCP1-209ENST00000613524 USH2AO75445 5202 aa2.53□□□□□ -2.01
SYCP1-209ENST00000613524 KRTAP5-9P26371 169 aa2.52□□□□□ -2.01
SYCP1-209ENST00000613524 C20orf166-AS1Q96NR2 134 aa2.51□□□□□ -2.01
SYCP1-209ENST00000613524 K7ERS5 55 aa2.51□□□□□ -2.01
SYCP1-209ENST00000613524 MT1HP80294 61 aa2.5□□□□□ -2.01
SYCP1-209ENST00000613524 MIR22HGQ0VDD5 57 aa2.5□□□□□ -2.01
SYCP1-209ENST00000613524 LCE3CQ5T5A8 94 aa2.5□□□□□ -2.01
SYCP1-209ENST00000613524 UQCR11O14957 56 aa2.5□□□□□ -2.01
SYCP1-209ENST00000613524 KRTAP25-1Q3LHN0 102 aa2.5□□□□□ -2.01
SYCP1-209ENST00000613524 KRTAP19-2Q3LHN2 52 aa2.47□□□□□ -2.01
SYCP1-209ENST00000613524 FLGP20930 4061 aaPredicted RBP2.45□□□□□ -2.02
SYCP1-209ENST00000613524 H0YAA0 97 aa2.44□□□□□ -2.02
SYCP1-209ENST00000613524 KRTAP10-6P60371 365 aaPredicted RBP2.44□□□□□ -2.02
SYCP1-209ENST00000613524 LINC01554Q52M75 96 aa2.44□□□□□ -2.02
SYCP1-209ENST00000613524 KRTAP10-10P60014 251 aa2.44□□□□□ -2.02
SYCP1-209ENST00000613524 CSAG1Q6PB30 78 aa2.43□□□□□ -2.02
SYCP1-209ENST00000613524 MUC5BQ9HC84 5762 aaPredicted RBP2.41□□□□□ -2.02
SYCP1-209ENST00000613524 R4GN34 69 aa2.41□□□□□ -2.02
SYCP1-209ENST00000613524 H1FX-AS1Q4G0G2 97 aa2.39□□□□□ -2.03
SYCP1-209ENST00000613524 A0A1B0GU33 70 aa2.39□□□□□ -2.03
SYCP1-209ENST00000613524 KRTAP5-4Q6L8H1 288 aa2.38□□□□□ -2.03
SYCP1-209ENST00000613524 KRTAP2-2Q9BYT5 123 aa2.38□□□□□ -2.03
SYCP1-209ENST00000613524 MT1FP04733 61 aa2.37□□□□□ -2.03
SYCP1-209ENST00000613524 MT2AP02795 61 aa2.36□□□□□ -2.03
SYCP1-209ENST00000613524 SSPOA2VEC9 5147 aa2.36□□□□□ -2.03
SYCP1-209ENST00000613524 S4R3F8 94 aa2.36□□□□□ -2.03
SYCP1-209ENST00000613524 KRTAP5-11Q6L8G4 156 aa2.34□□□□□ -2.03
SYCP1-209ENST00000613524 CRCT1Q9UGL9 99 aa2.34□□□□□ -2.03
SYCP1-209ENST00000613524 LCE3EQ5T5B0 92 aa2.34□□□□□ -2.04
SYCP1-209ENST00000613524 KRTAP13-4Q3LI77 160 aa2.33□□□□□ -2.04
SYCP1-209ENST00000613524 CRIPTQ9P021 101 aa2.31□□□□□ -2.04
SYCP1-209ENST00000613524 ROMO1P60602 79 aa2.3□□□□□ -2.04
SYCP1-209ENST00000613524 SYNE2Q8WXH0 6885 aaKnown RBP2.29□□□□□ -2.04
SYCP1-209ENST00000613524 FCGBPQ9Y6R7 5405 aaPredicted RBP2.28□□□□□ -2.04
SYCP1-209ENST00000613524 P0C880 135 aa2.27□□□□□ -2.05
SYCP1-209ENST00000613524 MACF1Q9UPN3 7388 aaKnown RBP2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms