RNA–Protein interactions for RNA: ENST00000606878.1

LINC00240-203, long intergenic non-protein coding RNA 240, humanhuman

TSL 1 (best)

Gene LINC00240, Length 927 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00240-203ENST00000606878 KRTAP19-1Q8IUB9 90 aa7.66□□□□□ -1.18
LINC00240-203ENST00000606878 MP68P56378 58 aa7.65□□□□□ -1.18
LINC00240-203ENST00000606878 LINC00208Q96KT6 92 aa7.65□□□□□ -1.18
LINC00240-203ENST00000606878 OCR1Q9BZK8 76 aa7.65□□□□□ -1.18
LINC00240-203ENST00000606878 SCGB1A1P11684 91 aa7.6□□□□□ -1.19
LINC00240-203ENST00000606878 LCE3BQ5TA77 95 aa7.6□□□□□ -1.19
LINC00240-203ENST00000606878 H3BS24 57 aa7.58□□□□□ -1.2
LINC00240-203ENST00000606878 A8MUN3 132 aa7.56□□□□□ -1.2
LINC00240-203ENST00000606878 KLKP1Q107X0 134 aa7.56□□□□□ -1.2
LINC00240-203ENST00000606878 KRTAP19-6Q3LI70 58 aa7.56□□□□□ -1.2
LINC00240-203ENST00000606878 NDUFC1O43677 76 aa7.55□□□□□ -1.2
LINC00240-203ENST00000606878 H3BPC8 53 aa7.54□□□□□ -1.2
LINC00240-203ENST00000606878 FCGBPQ9Y6R7 5405 aaPredicted RBP7.53□□□□□ -1.2
LINC00240-203ENST00000606878 K7ERU9 68 aa7.52□□□□□ -1.21
LINC00240-203ENST00000606878 IMUPQ9GZP8 106 aa7.52□□□□□ -1.21
LINC00240-203ENST00000606878 SPRR2GQ9BYE4 73 aa7.47□□□□□ -1.21
LINC00240-203ENST00000606878 MT-ATP8P03928 68 aa7.45□□□□□ -1.22
LINC00240-203ENST00000606878 CRIPTQ9P021 101 aa7.44□□□□□ -1.22
LINC00240-203ENST00000606878 KRTAP9-7A8MTY7 169 aa7.42□□□□□ -1.22
LINC00240-203ENST00000606878 H0YAA0 97 aa7.41□□□□□ -1.22
LINC00240-203ENST00000606878 Q5VV11 94 aa7.41□□□□□ -1.22
LINC00240-203ENST00000606878 KRTAP9-9Q9BYP9 154 aa7.41□□□□□ -1.22
LINC00240-203ENST00000606878 KRTAP9-4Q9BYQ2 154 aa7.41□□□□□ -1.22
LINC00240-203ENST00000606878 KRTAP19-8Q3LI54 63 aa7.4□□□□□ -1.22
LINC00240-203ENST00000606878 SMIM20Q8N5G0 67 aa7.4□□□□□ -1.22
LINC00240-203ENST00000606878 TRAV7A0A075B6U4 112 aa7.37□□□□□ -1.23
LINC00240-203ENST00000606878 MT1BP07438 61 aa7.36□□□□□ -1.23
LINC00240-203ENST00000606878 DMAC1Q96GE9 116 aa7.36□□□□□ -1.23
LINC00240-203ENST00000606878 ADM2Q7Z4H4 148 aa7.35□□□□□ -1.23
LINC00240-203ENST00000606878 KRTAP19-4Q3LI73 84 aa7.32□□□□□ -1.24
LINC00240-203ENST00000606878 MACF1Q9UPN3 7388 aaKnown RBP7.3□□□□□ -1.24
LINC00240-203ENST00000606878 A6NN06 94 aa7.29□□□□□ -1.24
LINC00240-203ENST00000606878 SYNE2Q8WXH0 6885 aaKnown RBP7.27□□□□□ -1.25
LINC00240-203ENST00000606878 ACYP2P14621 99 aa7.26□□□□□ -1.25
LINC00240-203ENST00000606878 KRTAP4-8A0A0G2JLE6 195 aa7.24□□□□□ -1.25
LINC00240-203ENST00000606878 C20orf197Q8N268 126 aa7.23□□□□□ -1.25
LINC00240-203ENST00000606878 KRTAP10-5P60370 271 aa7.19□□□□□ -1.26
LINC00240-203ENST00000606878 SNURFQ9Y675 71 aa7.19□□□□□ -1.26
LINC00240-203ENST00000606878 P0C880 135 aa7.16□□□□□ -1.26
LINC00240-203ENST00000606878 SERP2Q8N6R1 65 aa7.16□□□□□ -1.26
LINC00240-203ENST00000606878 SPTSSBQ8NFR3 76 aa7.16□□□□□ -1.26
LINC00240-203ENST00000606878 R4GN34 69 aa7.16□□□□□ -1.26
LINC00240-203ENST00000606878 CHKB-CPT1BH3BT56 60 aa7.12□□□□□ -1.27
LINC00240-203ENST00000606878 KRTAP6-3Q3LI67 103 aa7.12□□□□□ -1.27
LINC00240-203ENST00000606878 LCE1DQ5T752 114 aa7.12□□□□□ -1.27
LINC00240-203ENST00000606878 M0QZ58 72 aa7.1□□□□□ -1.27
LINC00240-203ENST00000606878 SPANXA2-OT1Q8N9U9 137 aa7.1□□□□□ -1.27
LINC00240-203ENST00000606878 PLAC4Q8WY50 150 aa7.1□□□□□ -1.27
LINC00240-203ENST00000606878 PRO2289Q9P1D8 64 aa7.02□□□□□ -1.29
LINC00240-203ENST00000606878 LCE4AQ5TA78 99 aa7.01□□□□□ -1.29
LINC00240-203ENST00000606878 LINC01554Q52M75 96 aa7□□□□□ -1.29
LINC00240-203ENST00000606878 KRTAP4-7Q9BYR0 210 aa6.99□□□□□ -1.29
LINC00240-203ENST00000606878 COX7CP15954 63 aa6.96□□□□□ -1.3
LINC00240-203ENST00000606878 MT1XP80297 61 aa6.93□□□□□ -1.3
LINC00240-203ENST00000606878 COA5Q86WW8 74 aa6.88□□□□□ -1.31
LINC00240-203ENST00000606878 KRTAP4-9Q9BYQ8 210 aa6.87□□□□□ -1.31
LINC00240-203ENST00000606878 NEBP20929 6669 aa6.82□□□□□ -1.32
LINC00240-203ENST00000606878 H7BZZ5 65 aa6.81□□□□□ -1.32
LINC00240-203ENST00000606878 KRTAP5-9P26371 169 aa6.81□□□□□ -1.32
LINC00240-203ENST00000606878 SEC61GP60059 68 aa6.79□□□□□ -1.32
LINC00240-203ENST00000606878 ANAPC13Q9BS18 74 aa6.78□□□□□ -1.32
LINC00240-203ENST00000606878 CYSTM1Q9H1C7 97 aa6.77□□□□□ -1.33
LINC00240-203ENST00000606878 SERP1Q9Y6X1 66 aa6.77□□□□□ -1.33
LINC00240-203ENST00000606878 KRTAP12-2P59991 146 aa6.76□□□□□ -1.33
LINC00240-203ENST00000606878 KRTAP13-4Q3LI77 160 aa6.72□□□□□ -1.33
LINC00240-203ENST00000606878 MUC12Q9UKN1 5478 aa6.7□□□□□ -1.34
LINC00240-203ENST00000606878 LCE5AQ5TCM9 118 aa6.7□□□□□ -1.34
LINC00240-203ENST00000606878 KRTAP8-1Q8IUC2 63 aa6.69□□□□□ -1.34
LINC00240-203ENST00000606878 KRTAP4-2Q9BYR5 136 aa6.69□□□□□ -1.34
LINC00240-203ENST00000606878 KMT2DO14686 5537 aa6.68□□□□□ -1.34
LINC00240-203ENST00000606878 SPRR2FQ96RM1 72 aa6.66□□□□□ -1.34
LINC00240-203ENST00000606878 KRTAP4-11Q9BYQ6 195 aa6.65□□□□□ -1.34
LINC00240-203ENST00000606878 A0A1B0GU33 70 aa6.63□□□□□ -1.35
LINC00240-203ENST00000606878 CAMK2N1Q7Z7J9 78 aa6.63□□□□□ -1.35
LINC00240-203ENST00000606878 KRTAP10-7P60409 375 aaPredicted RBP6.62□□□□□ -1.35
LINC00240-203ENST00000606878 CCDC179H3BU77 68 aa6.61□□□□□ -1.35
LINC00240-203ENST00000606878 KRTAP10-12P60413 245 aa6.6□□□□□ -1.35
LINC00240-203ENST00000606878 A0A0D9SG42 100 aa6.58□□□□□ -1.36
LINC00240-203ENST00000606878 SPATA8Q6RVD6 105 aa6.58□□□□□ -1.36
LINC00240-203ENST00000606878 A0A1B0GU69 56 aa6.56□□□□□ -1.36
LINC00240-203ENST00000606878 MDN1Q9NU22 5596 aa6.54□□□□□ -1.36
LINC00240-203ENST00000606878 SPRR2EP22531 72 aa6.53□□□□□ -1.36
LINC00240-203ENST00000606878 SPRR2BP35325 72 aa6.53□□□□□ -1.36
LINC00240-203ENST00000606878 SPRR2AP35326 72 aa6.53□□□□□ -1.36
LINC00240-203ENST00000606878 KRTAP20-1Q3LI63 56 aa6.53□□□□□ -1.36
LINC00240-203ENST00000606878 ATP5EP56381 51 aaPredicted RBP6.52□□□□□ -1.37
LINC00240-203ENST00000606878 SPINT4Q6UDR6 99 aa6.5□□□□□ -1.37
LINC00240-203ENST00000606878 SMIM26A0A096LP01 95 aa6.45□□□□□ -1.38
LINC00240-203ENST00000606878 LCE1AQ5T7P2 110 aa6.45□□□□□ -1.38
LINC00240-203ENST00000606878 KRTAP2-3P0C7H8 128 aa6.43□□□□□ -1.38
LINC00240-203ENST00000606878 KRTAP2-4Q9BYR9 128 aa6.43□□□□□ -1.38
LINC00240-203ENST00000606878 KRTAP12-1P59990 96 aa6.42□□□□□ -1.38
LINC00240-203ENST00000606878 PRR15LQ9BU68 103 aa6.42□□□□□ -1.38
LINC00240-203ENST00000606878 TMEM258P61165 79 aa6.38□□□□□ -1.39
LINC00240-203ENST00000606878 A8MU10 97 aa6.34□□□□□ -1.39
LINC00240-203ENST00000606878 LINC01558Q9Y6Z2 57 aa6.34□□□□□ -1.39
LINC00240-203ENST00000606878 SPRR2DP22532 72 aa6.32□□□□□ -1.4
LINC00240-203ENST00000606878 KRTAP2-2Q9BYT5 123 aa6.22□□□□□ -1.41
LINC00240-203ENST00000606878 KRTAP2-1Q9BYU5 128 aa6.22□□□□□ -1.41
LINC00240-203ENST00000606878 KRTAP23-1A1A580 65 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms