RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 SERP2Q8N6R1 65 aa9.15□□□□□ -0.94
CCDC9-205ENST00000600117 KRTAP9-8Q9BYQ0 159 aa9.13□□□□□ -0.95
CCDC9-205ENST00000600117 KRTAP19-1Q8IUB9 90 aa9.1□□□□□ -0.95
CCDC9-205ENST00000600117 SNURFQ9Y675 71 aa9.04□□□□□ -0.96
CCDC9-205ENST00000600117 S4R3F8 94 aa9.04□□□□□ -0.96
CCDC9-205ENST00000600117 C20orf197Q8N268 126 aa9.03□□□□□ -0.96
CCDC9-205ENST00000600117 A8MUN3 132 aa9.02□□□□□ -0.97
CCDC9-205ENST00000600117 COX7CP15954 63 aa9.01□□□□□ -0.97
CCDC9-205ENST00000600117 LCA10Q71F78 164 aa9□□□□□ -0.97
CCDC9-205ENST00000600117 LCE2BO14633 110 aa8.97□□□□□ -0.97
CCDC9-205ENST00000600117 MT2AP02795 61 aa8.97□□□□□ -0.97
CCDC9-205ENST00000600117 DMAC1Q96GE9 116 aa8.96□□□□□ -0.98
CCDC9-205ENST00000600117 KRTAP3-3Q9BYR6 98 aa8.96□□□□□ -0.98
CCDC9-205ENST00000600117 ANAPC13Q9BS18 74 aa8.92□□□□□ -0.98
CCDC9-205ENST00000600117 MT1FP04733 61 aa8.9□□□□□ -0.98
CCDC9-205ENST00000600117 CSAG1Q6PB30 78 aa8.9□□□□□ -0.98
CCDC9-205ENST00000600117 SPANXA2-OT1Q8N9U9 137 aa8.86□□□□□ -0.99
CCDC9-205ENST00000600117 KRTAP9-3Q9BYQ3 159 aa8.86□□□□□ -0.99
CCDC9-205ENST00000600117 CYSTM1Q9H1C7 97 aa8.84□□□□□ -0.99
CCDC9-205ENST00000600117 NDUFC1O43677 76 aa8.83□□□□□ -1
CCDC9-205ENST00000600117 KRTAP10-10P60014 251 aa8.82□□□□□ -1
CCDC9-205ENST00000600117 ACYP2P14621 99 aa8.79□□□□□ -1
CCDC9-205ENST00000600117 KRTAP6-3Q3LI67 103 aa8.79□□□□□ -1
CCDC9-205ENST00000600117 KRTAP19-6Q3LI70 58 aa8.78□□□□□ -1
CCDC9-205ENST00000600117 CCDC179H3BU77 68 aa8.77□□□□□ -1.01
CCDC9-205ENST00000600117 H7BZZ5 65 aa8.77□□□□□ -1.01
CCDC9-205ENST00000600117 NEBP20929 6669 aa8.77□□□□□ -1.01
CCDC9-205ENST00000600117 H0YAA0 97 aa8.67□□□□□ -1.02
CCDC9-205ENST00000600117 CHKB-CPT1BH3BT56 60 aa8.62□□□□□ -1.03
CCDC9-205ENST00000600117 MUC12Q9UKN1 5478 aa8.6□□□□□ -1.03
CCDC9-205ENST00000600117 COA5Q86WW8 74 aa8.59□□□□□ -1.03
CCDC9-205ENST00000600117 ADM2Q7Z4H4 148 aa8.57□□□□□ -1.04
CCDC9-205ENST00000600117 SPTSSBQ8NFR3 76 aa8.57□□□□□ -1.04
CCDC9-205ENST00000600117 KRTAP3-2Q9BYR7 98 aa8.5□□□□□ -1.05
CCDC9-205ENST00000600117 PCP4P48539 62 aa8.48□□□□□ -1.05
CCDC9-205ENST00000600117 SPRR2GQ9BYE4 73 aa8.48□□□□□ -1.05
CCDC9-205ENST00000600117 CRIPTQ9P021 101 aa8.48□□□□□ -1.05
CCDC9-205ENST00000600117 P0C880 135 aa8.47□□□□□ -1.05
CCDC9-205ENST00000600117 ATP5EP56381 51 aaPredicted RBP8.47□□□□□ -1.05
CCDC9-205ENST00000600117 KRTAP20-1Q3LI63 56 aa8.44□□□□□ -1.06
CCDC9-205ENST00000600117 TMEM258P61165 79 aa8.43□□□□□ -1.06
CCDC9-205ENST00000600117 KRTAP19-8Q3LI54 63 aa8.37□□□□□ -1.07
CCDC9-205ENST00000600117 MDN1Q9NU22 5596 aa8.34□□□□□ -1.07
CCDC9-205ENST00000600117 MT1BP07438 61 aa8.31□□□□□ -1.08
CCDC9-205ENST00000600117 R4GN34 69 aa8.29□□□□□ -1.08
CCDC9-205ENST00000600117 Q5VV11 94 aa8.27□□□□□ -1.09
CCDC9-205ENST00000600117 M0QZ58 72 aa8.26□□□□□ -1.09
CCDC9-205ENST00000600117 KMT2DO14686 5537 aa8.23□□□□□ -1.09
CCDC9-205ENST00000600117 SEC61GP60059 68 aa8.18□□□□□ -1.1
CCDC9-205ENST00000600117 SERP1Q9Y6X1 66 aa8.18□□□□□ -1.1
CCDC9-205ENST00000600117 A6NN06 94 aa8.13□□□□□ -1.11
CCDC9-205ENST00000600117 KRTAP13-4Q3LI77 160 aa8.13□□□□□ -1.11
CCDC9-205ENST00000600117 KRTAP5-9P26371 169 aa8.12□□□□□ -1.11
CCDC9-205ENST00000600117 A0A1B0GU69 56 aa8.1□□□□□ -1.11
CCDC9-205ENST00000600117 LINC01554Q52M75 96 aa8.1□□□□□ -1.11
CCDC9-205ENST00000600117 LINC01558Q9Y6Z2 57 aa8.07□□□□□ -1.12
CCDC9-205ENST00000600117 KRTAP2-3P0C7H8 128 aa8.06□□□□□ -1.12
CCDC9-205ENST00000600117 KRTAP2-4Q9BYR9 128 aa8.06□□□□□ -1.12
CCDC9-205ENST00000600117 A0A1B0GU33 70 aa8.05□□□□□ -1.12
CCDC9-205ENST00000600117 PLAC4Q8WY50 150 aa8.01□□□□□ -1.13
CCDC9-205ENST00000600117 KRTAP10-5P60370 271 aa8□□□□□ -1.13
CCDC9-205ENST00000600117 SPATA8Q6RVD6 105 aa7.97□□□□□ -1.13
CCDC9-205ENST00000600117 PRR15LQ9BU68 103 aa7.97□□□□□ -1.13
CCDC9-205ENST00000600117 MT1XP80297 61 aa7.9□□□□□ -1.14
CCDC9-205ENST00000600117 RPS28P62857 69 aaKnown RBP7.89□□□□□ -1.15
CCDC9-205ENST00000600117 SMIM26A0A096LP01 95 aa7.87□□□□□ -1.15
CCDC9-205ENST00000600117 A0A0D9SG42 100 aa7.87□□□□□ -1.15
CCDC9-205ENST00000600117 Q1T7F1 81 aa7.86□□□□□ -1.15
CCDC9-205ENST00000600117 V9GYY9 64 aa7.85□□□□□ -1.15
CCDC9-205ENST00000600117 PRO2289Q9P1D8 64 aa7.82□□□□□ -1.16
CCDC9-205ENST00000600117 A8MU10 97 aa7.78□□□□□ -1.16
CCDC9-205ENST00000600117 KRTAP12-1P59990 96 aa7.77□□□□□ -1.17
CCDC9-205ENST00000600117 PSPHP1O15172 72 aa7.76□□□□□ -1.17
CCDC9-205ENST00000600117 KRTAP2-2Q9BYT5 123 aa7.76□□□□□ -1.17
CCDC9-205ENST00000600117 KRTAP2-1Q9BYU5 128 aa7.76□□□□□ -1.17
CCDC9-205ENST00000600117 UQCR11O14957 56 aa7.74□□□□□ -1.17
CCDC9-205ENST00000600117 SPRR2EP22531 72 aa7.74□□□□□ -1.17
CCDC9-205ENST00000600117 SPRR2BP35325 72 aa7.74□□□□□ -1.17
CCDC9-205ENST00000600117 SPRR2AP35326 72 aa7.74□□□□□ -1.17
CCDC9-205ENST00000600117 KRTAP12-2P59991 146 aa7.71□□□□□ -1.18
CCDC9-205ENST00000600117 SPINT4Q6UDR6 99 aa7.71□□□□□ -1.18
CCDC9-205ENST00000600117 SPRR2FQ96RM1 72 aa7.7□□□□□ -1.18
CCDC9-205ENST00000600117 CAMK2N1Q7Z7J9 78 aa7.68□□□□□ -1.18
CCDC9-205ENST00000600117 GPR98Q8WXG9 6306 aa7.67□□□□□ -1.18
CCDC9-205ENST00000600117 MIR22HGQ0VDD5 57 aa7.62□□□□□ -1.19
CCDC9-205ENST00000600117 LCE1AQ5T7P2 110 aa7.56□□□□□ -1.2
CCDC9-205ENST00000600117 KRTAP10-7P60409 375 aaPredicted RBP7.54□□□□□ -1.2
CCDC9-205ENST00000600117 A6NED7 52 aa7.51□□□□□ -1.21
CCDC9-205ENST00000600117 KRTAP10-12P60413 245 aa7.5□□□□□ -1.21
CCDC9-205ENST00000600117 SPRR2DP22532 72 aa7.49□□□□□ -1.21
CCDC9-205ENST00000600117 KRTAP8-1Q8IUC2 63 aa7.45□□□□□ -1.22
CCDC9-205ENST00000600117 KRTAP4-8A0A0G2JLE6 195 aa7.4□□□□□ -1.22
CCDC9-205ENST00000600117 KRTAP4-8Q9BYQ9 185 aa7.4□□□□□ -1.22
CCDC9-205ENST00000600117 C10orf95Q9H7T3 257 aa7.39□□□□□ -1.23
CCDC9-205ENST00000600117 LCE3BQ5TA77 95 aa7.35□□□□□ -1.23
CCDC9-205ENST00000600117 K7ERS5 55 aa7.33□□□□□ -1.24
CCDC9-205ENST00000600117 CDC42SE1Q9NRR8 79 aa7.3□□□□□ -1.24
CCDC9-205ENST00000600117 DSTQ03001 7570 aaKnown RBP7.29□□□□□ -1.24
CCDC9-205ENST00000600117 TNP1P09430 55 aa7.22□□□□□ -1.25
CCDC9-205ENST00000600117 KRTAP25-1Q3LHN0 102 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 135.7 ms