RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 IMUPQ9GZP8 106 aa6.28□□□□□ -1.4
SHKBP1-208ENST00000595726 TP53AIP1Q9HCN2 124 aa6.28□□□□□ -1.4
SHKBP1-208ENST00000595726 GPR98Q8WXG9 6306 aa6.26□□□□□ -1.41
SHKBP1-208ENST00000595726 MT-ATP8P03928 68 aa6.26□□□□□ -1.41
SHKBP1-208ENST00000595726 KRTAP10-5P60370 271 aa6.25□□□□□ -1.41
SHKBP1-208ENST00000595726 HIST1H4AP62805 103 aaKnown RBP6.25□□□□□ -1.41
SHKBP1-208ENST00000595726 KRTAP3-1Q9BYR8 98 aa6.22□□□□□ -1.41
SHKBP1-208ENST00000595726 KRTAP2-2Q9BYT5 123 aa6.22□□□□□ -1.41
SHKBP1-208ENST00000595726 KRTAP2-1Q9BYU5 128 aa6.22□□□□□ -1.41
SHKBP1-208ENST00000595726 SPRR2EP22531 72 aa6.21□□□□□ -1.42
SHKBP1-208ENST00000595726 SPRR2BP35325 72 aa6.21□□□□□ -1.42
SHKBP1-208ENST00000595726 SPRR2AP35326 72 aa6.21□□□□□ -1.42
SHKBP1-208ENST00000595726 Q5VV11 94 aa6.21□□□□□ -1.42
SHKBP1-208ENST00000595726 C1orf64Q8NEQ6 169 aa6.18□□□□□ -1.42
SHKBP1-208ENST00000595726 TRAV22A0A0B4J277 110 aa6.17□□□□□ -1.42
SHKBP1-208ENST00000595726 C5orf47Q569G3 176 aa6.16□□□□□ -1.42
SHKBP1-208ENST00000595726 S4R3F8 94 aa6.16□□□□□ -1.42
SHKBP1-208ENST00000595726 A0A087WVE0 104 aa6.15□□□□□ -1.42
SHKBP1-208ENST00000595726 A0A0A0MQY5 61 aa6.15□□□□□ -1.42
SHKBP1-208ENST00000595726 SCGB1A1P11684 91 aa6.15□□□□□ -1.42
SHKBP1-208ENST00000595726 KRTAP19-8Q3LI54 63 aa6.15□□□□□ -1.42
SHKBP1-208ENST00000595726 SPRR2FQ96RM1 72 aa6.15□□□□□ -1.42
SHKBP1-208ENST00000595726 CYP4F30PQ9H0H9 118 aa6.15□□□□□ -1.42
SHKBP1-208ENST00000595726 LCA10Q71F78 164 aa6.13□□□□□ -1.43
SHKBP1-208ENST00000595726 FAM236AA0A1B0GUQ0 79 aa6.12□□□□□ -1.43
SHKBP1-208ENST00000595726 FAM236BA0A1B0GV22 79 aa6.12□□□□□ -1.43
SHKBP1-208ENST00000595726 LOC101927531A0A1B0GV80 90 aa6.12□□□□□ -1.43
SHKBP1-208ENST00000595726 ATOX1O00244 68 aa6.1□□□□□ -1.43
SHKBP1-208ENST00000595726 UQCRQO14949 82 aa6.09□□□□□ -1.43
SHKBP1-208ENST00000595726 SMIM20Q8N5G0 67 aa6.09□□□□□ -1.43
SHKBP1-208ENST00000595726 CSAG1Q6PB30 78 aa6.08□□□□□ -1.44
SHKBP1-208ENST00000595726 SPRR2GQ9BYE4 73 aa6.08□□□□□ -1.44
SHKBP1-208ENST00000595726 KRTAP23-1A1A580 65 aa6.07□□□□□ -1.44
SHKBP1-208ENST00000595726 H0Y9P7 68 aa6.07□□□□□ -1.44
SHKBP1-208ENST00000595726 LCE1AQ5T7P2 110 aa6.04□□□□□ -1.44
SHKBP1-208ENST00000595726 ANAPC13Q9BS18 74 aa6.02□□□□□ -1.45
SHKBP1-208ENST00000595726 TRAV7A0A075B6U4 112 aa6□□□□□ -1.45
SHKBP1-208ENST00000595726 SPRR2DP22532 72 aa6□□□□□ -1.45
SHKBP1-208ENST00000595726 SERP2Q8N6R1 65 aa5.99□□□□□ -1.45
SHKBP1-208ENST00000595726 OCR1Q9BZK8 76 aa5.99□□□□□ -1.45
SHKBP1-208ENST00000595726 LINC00208Q96KT6 92 aa5.97□□□□□ -1.45
SHKBP1-208ENST00000595726 KLKP1Q107X0 134 aa5.96□□□□□ -1.46
SHKBP1-208ENST00000595726 MP68P56378 58 aa5.95□□□□□ -1.46
SHKBP1-208ENST00000595726 COX7CP15954 63 aa5.94□□□□□ -1.46
SHKBP1-208ENST00000595726 A8MUN3 132 aa5.93□□□□□ -1.46
SHKBP1-208ENST00000595726 DSTQ03001 7570 aaKnown RBP5.92□□□□□ -1.46
SHKBP1-208ENST00000595726 H3BPC8 53 aa5.92□□□□□ -1.46
SHKBP1-208ENST00000595726 KRTAP8-1Q8IUC2 63 aa5.91□□□□□ -1.46
SHKBP1-208ENST00000595726 NDUFC1O43677 76 aa5.9□□□□□ -1.46
SHKBP1-208ENST00000595726 LCE3BQ5TA77 95 aa5.88□□□□□ -1.47
SHKBP1-208ENST00000595726 H0YAA0 97 aa5.87□□□□□ -1.47
SHKBP1-208ENST00000595726 C20orf197Q8N268 126 aa5.86□□□□□ -1.47
SHKBP1-208ENST00000595726 CRIPTQ9P021 101 aa5.86□□□□□ -1.47
SHKBP1-208ENST00000595726 CCDC179H3BU77 68 aa5.82□□□□□ -1.48
SHKBP1-208ENST00000595726 SNURFQ9Y675 71 aa5.81□□□□□ -1.48
SHKBP1-208ENST00000595726 ADM2Q7Z4H4 148 aa5.79□□□□□ -1.48
SHKBP1-208ENST00000595726 DMAC1Q96GE9 116 aa5.79□□□□□ -1.48
SHKBP1-208ENST00000595726 KRTAP4-8A0A0G2JLE6 195 aa5.77□□□□□ -1.49
SHKBP1-208ENST00000595726 KRTAP4-8Q9BYQ9 185 aa5.77□□□□□ -1.49
SHKBP1-208ENST00000595726 MT1XP80297 61 aa5.76□□□□□ -1.49
SHKBP1-208ENST00000595726 H7BZZ5 65 aa5.71□□□□□ -1.5
SHKBP1-208ENST00000595726 KRTAP4-9Q9BYQ8 210 aa5.71□□□□□ -1.5
SHKBP1-208ENST00000595726 PRO2289Q9P1D8 64 aa5.71□□□□□ -1.5
SHKBP1-208ENST00000595726 TMEM258P61165 79 aa5.69□□□□□ -1.5
SHKBP1-208ENST00000595726 SPANXA2-OT1Q8N9U9 137 aa5.69□□□□□ -1.5
SHKBP1-208ENST00000595726 P0C880 135 aa5.68□□□□□ -1.5
SHKBP1-208ENST00000595726 ATP5EP56381 51 aaPredicted RBP5.68□□□□□ -1.5
SHKBP1-208ENST00000595726 CYSTM1Q9H1C7 97 aa5.68□□□□□ -1.5
SHKBP1-208ENST00000595726 KRTAP12-2P59991 146 aa5.67□□□□□ -1.5
SHKBP1-208ENST00000595726 R4GN34 69 aa5.64□□□□□ -1.51
SHKBP1-208ENST00000595726 ACYP2P14621 99 aa5.63□□□□□ -1.51
SHKBP1-208ENST00000595726 M0QZ58 72 aa5.6□□□□□ -1.51
SHKBP1-208ENST00000595726 PLAC4Q8WY50 150 aa5.57□□□□□ -1.52
SHKBP1-208ENST00000595726 HMCN1Q96RW7 5635 aa5.56□□□□□ -1.52
SHKBP1-208ENST00000595726 SPTSSBQ8NFR3 76 aa5.55□□□□□ -1.52
SHKBP1-208ENST00000595726 AHNAK2Q8IVF2 5795 aa5.54□□□□□ -1.52
SHKBP1-208ENST00000595726 CHKB-CPT1BH3BT56 60 aa5.53□□□□□ -1.52
SHKBP1-208ENST00000595726 KRTAP10-7P60409 375 aaPredicted RBP5.51□□□□□ -1.53
SHKBP1-208ENST00000595726 LINC01554Q52M75 96 aa5.51□□□□□ -1.53
SHKBP1-208ENST00000595726 SERP1Q9Y6X1 66 aa5.5□□□□□ -1.53
SHKBP1-208ENST00000595726 COA5Q86WW8 74 aa5.48□□□□□ -1.53
SHKBP1-208ENST00000595726 RPS28P62857 69 aaKnown RBP5.46□□□□□ -1.54
SHKBP1-208ENST00000595726 LCE1DQ5T752 114 aa5.45□□□□□ -1.54
SHKBP1-208ENST00000595726 KRTAP10-12P60413 245 aa5.43□□□□□ -1.54
SHKBP1-208ENST00000595726 KRTAP19-4Q3LI73 84 aa5.4□□□□□ -1.54
SHKBP1-208ENST00000595726 SMIM26A0A096LP01 95 aa5.36□□□□□ -1.55
SHKBP1-208ENST00000595726 KRTAP5-10Q6L8G5 202 aa5.35□□□□□ -1.55
SHKBP1-208ENST00000595726 MT4P47944 62 aa5.34□□□□□ -1.55
SHKBP1-208ENST00000595726 KRTAP13-4Q3LI77 160 aa5.34□□□□□ -1.55
SHKBP1-208ENST00000595726 V9GYY9 64 aa5.33□□□□□ -1.56
SHKBP1-208ENST00000595726 SEC61GP60059 68 aa5.32□□□□□ -1.56
SHKBP1-208ENST00000595726 LCE5AQ5TCM9 118 aa5.3□□□□□ -1.56
SHKBP1-208ENST00000595726 Q1T7F1 81 aa5.27□□□□□ -1.57
SHKBP1-208ENST00000595726 PRR15LQ9BU68 103 aa5.27□□□□□ -1.57
SHKBP1-208ENST00000595726 LINC01558Q9Y6Z2 57 aa5.26□□□□□ -1.57
SHKBP1-208ENST00000595726 A0A1B0GU69 56 aa5.24□□□□□ -1.57
SHKBP1-208ENST00000595726 LCE4AQ5TA78 99 aa5.21□□□□□ -1.58
SHKBP1-208ENST00000595726 KRTAP5-7Q6L8G8 165 aa5.2□□□□□ -1.58
SHKBP1-208ENST00000595726 KRTAP19-3Q7Z4W3 81 aa5.19□□□□□ -1.58
SHKBP1-208ENST00000595726 CAMK2N1Q7Z7J9 78 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms