RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 ATP5EP56381 51 aaPredicted RBP6.15□□□□□ -1.42
DDX39A-219ENST00000592927 FCGBPQ9Y6R7 5405 aaPredicted RBP6.15□□□□□ -1.43
DDX39A-219ENST00000592927 HRES1P13985 223 aa6.12□□□□□ -1.43
DDX39A-219ENST00000592927 FAM236DA0A1B0GTK5 79 aa6.11□□□□□ -1.43
DDX39A-219ENST00000592927 FAM236CP0DP71 79 aa6.11□□□□□ -1.43
DDX39A-219ENST00000592927 MACF1Q9UPN3 7388 aaKnown RBP6.1□□□□□ -1.43
DDX39A-219ENST00000592927 M0R2T5 61 aa6.1□□□□□ -1.43
DDX39A-219ENST00000592927 COX6B2Q6YFQ2 88 aa6.06□□□□□ -1.44
DDX39A-219ENST00000592927 A8MUN3 132 aa6.04□□□□□ -1.44
DDX39A-219ENST00000592927 DMAC1Q96GE9 116 aa6.04□□□□□ -1.44
DDX39A-219ENST00000592927 C4orf26Q17RF5 130 aa6.03□□□□□ -1.44
DDX39A-219ENST00000592927 RBM12B-AS1Q9P1G2 102 aa6.03□□□□□ -1.44
DDX39A-219ENST00000592927 ACYP2P14621 99 aa6.01□□□□□ -1.45
DDX39A-219ENST00000592927 MPLKIPQ8TAP9 179 aa6□□□□□ -1.45
DDX39A-219ENST00000592927 KRTAP19-1Q8IUB9 90 aa5.98□□□□□ -1.45
DDX39A-219ENST00000592927 SERP1Q9Y6X1 66 aa5.98□□□□□ -1.45
DDX39A-219ENST00000592927 FLGP20930 4061 aaPredicted RBP5.97□□□□□ -1.45
DDX39A-219ENST00000592927 RPS28P62857 69 aaKnown RBP5.95□□□□□ -1.46
DDX39A-219ENST00000592927 KRTAP3-1Q9BYR8 98 aa5.95□□□□□ -1.46
DDX39A-219ENST00000592927 COA5Q86WW8 74 aa5.93□□□□□ -1.46
DDX39A-219ENST00000592927 H1FX-AS1Q4G0G2 97 aa5.9□□□□□ -1.46
DDX39A-219ENST00000592927 CHKB-CPT1BH3BT56 60 aa5.89□□□□□ -1.47
DDX39A-219ENST00000592927 KRTAP6-3Q3LI67 103 aa5.86□□□□□ -1.47
DDX39A-219ENST00000592927 SPTSSBQ8NFR3 76 aa5.85□□□□□ -1.47
DDX39A-219ENST00000592927 S4R3F8 94 aa5.83□□□□□ -1.48
DDX39A-219ENST00000592927 NEBP20929 6669 aa5.82□□□□□ -1.48
DDX39A-219ENST00000592927 SMIM26A0A096LP01 95 aa5.82□□□□□ -1.48
DDX39A-219ENST00000592927 KRTAP9-8Q9BYQ0 159 aa5.82□□□□□ -1.48
DDX39A-219ENST00000592927 LCE2BO14633 110 aa5.8□□□□□ -1.48
DDX39A-219ENST00000592927 LCA10Q71F78 164 aa5.79□□□□□ -1.48
DDX39A-219ENST00000592927 KRTAP20-1Q3LI63 56 aa5.76□□□□□ -1.49
DDX39A-219ENST00000592927 KRTAP3-3Q9BYR6 98 aa5.75□□□□□ -1.49
DDX39A-219ENST00000592927 V9GYY9 64 aa5.75□□□□□ -1.49
DDX39A-219ENST00000592927 CSAG1Q6PB30 78 aa5.73□□□□□ -1.49
DDX39A-219ENST00000592927 Q1T7F1 81 aa5.72□□□□□ -1.49
DDX39A-219ENST00000592927 LINC01558Q9Y6Z2 57 aa5.7□□□□□ -1.5
DDX39A-219ENST00000592927 KRTAP19-6Q3LI70 58 aa5.68□□□□□ -1.5
DDX39A-219ENST00000592927 MT2AP02795 61 aa5.66□□□□□ -1.5
DDX39A-219ENST00000592927 MUC12Q9UKN1 5478 aa5.65□□□□□ -1.5
DDX39A-219ENST00000592927 SEC61GP60059 68 aa5.65□□□□□ -1.5
DDX39A-219ENST00000592927 PRR15LQ9BU68 103 aa5.65□□□□□ -1.5
DDX39A-219ENST00000592927 KRTAP9-3Q9BYQ3 159 aa5.65□□□□□ -1.5
DDX39A-219ENST00000592927 A0A1B0GU69 56 aa5.62□□□□□ -1.51
DDX39A-219ENST00000592927 H0YAA0 97 aa5.62□□□□□ -1.51
DDX39A-219ENST00000592927 MT1FP04733 61 aa5.62□□□□□ -1.51
DDX39A-219ENST00000592927 KRTAP10-10P60014 251 aa5.59□□□□□ -1.51
DDX39A-219ENST00000592927 PSPHP1O15172 72 aa5.56□□□□□ -1.52
DDX39A-219ENST00000592927 Q5VV11 94 aa5.54□□□□□ -1.52
DDX39A-219ENST00000592927 ADM2Q7Z4H4 148 aa5.54□□□□□ -1.52
DDX39A-219ENST00000592927 KRTAP3-2Q9BYR7 98 aa5.52□□□□□ -1.53
DDX39A-219ENST00000592927 A0A1B0GU33 70 aa5.48□□□□□ -1.53
DDX39A-219ENST00000592927 P0C880 135 aa5.48□□□□□ -1.53
DDX39A-219ENST00000592927 UQCR11O14957 56 aa5.46□□□□□ -1.54
DDX39A-219ENST00000592927 A6NED7 52 aa5.43□□□□□ -1.54
DDX39A-219ENST00000592927 KRTAP2-3P0C7H8 128 aa5.43□□□□□ -1.54
DDX39A-219ENST00000592927 KRTAP2-4Q9BYR9 128 aa5.43□□□□□ -1.54
DDX39A-219ENST00000592927 CRIPTQ9P021 101 aa5.42□□□□□ -1.54
DDX39A-219ENST00000592927 M0QZ58 72 aa5.41□□□□□ -1.54
DDX39A-219ENST00000592927 MDN1Q9NU22 5596 aa5.41□□□□□ -1.54
DDX39A-219ENST00000592927 KMT2DO14686 5537 aa5.41□□□□□ -1.54
DDX39A-219ENST00000592927 R4GN34 69 aa5.38□□□□□ -1.55
DDX39A-219ENST00000592927 MIR22HGQ0VDD5 57 aa5.37□□□□□ -1.55
DDX39A-219ENST00000592927 SPATA8Q6RVD6 105 aa5.37□□□□□ -1.55
DDX39A-219ENST00000592927 CDC42SE1Q9NRR8 79 aa5.35□□□□□ -1.55
DDX39A-219ENST00000592927 KRTAP13-4Q3LI77 160 aa5.33□□□□□ -1.56
DDX39A-219ENST00000592927 SPRR2GQ9BYE4 73 aa5.32□□□□□ -1.56
DDX39A-219ENST00000592927 BRK1Q8WUW1 75 aa5.3□□□□□ -1.56
DDX39A-219ENST00000592927 KRTAP5-9P26371 169 aa5.29□□□□□ -1.56
DDX39A-219ENST00000592927 A8MU10 97 aa5.24□□□□□ -1.57
DDX39A-219ENST00000592927 GPR98Q8WXG9 6306 aa5.24□□□□□ -1.57
DDX39A-219ENST00000592927 A0A0D9SG42 100 aa5.23□□□□□ -1.57
DDX39A-219ENST00000592927 KRTAP19-8Q3LI54 63 aa5.23□□□□□ -1.57
DDX39A-219ENST00000592927 A6NN06 94 aa5.22□□□□□ -1.57
DDX39A-219ENST00000592927 LINC01554Q52M75 96 aa5.22□□□□□ -1.57
DDX39A-219ENST00000592927 KRTAP2-2Q9BYT5 123 aa5.21□□□□□ -1.58
DDX39A-219ENST00000592927 KRTAP2-1Q9BYU5 128 aa5.21□□□□□ -1.58
DDX39A-219ENST00000592927 K7ERS5 55 aa5.2□□□□□ -1.58
DDX39A-219ENST00000592927 MT1BP07438 61 aa5.19□□□□□ -1.58
DDX39A-219ENST00000592927 PRO0628Q9UI54 55 aa5.17□□□□□ -1.58
DDX39A-219ENST00000592927 KRTAP12-1P59990 96 aa5.16□□□□□ -1.58
DDX39A-219ENST00000592927 SPINT4Q6UDR6 99 aa5.14□□□□□ -1.59
DDX39A-219ENST00000592927 KRTAP12-2P59991 146 aa5.12□□□□□ -1.59
DDX39A-219ENST00000592927 PLAC4Q8WY50 150 aa5.1□□□□□ -1.59
DDX39A-219ENST00000592927 SPRR2EP22531 72 aa5.09□□□□□ -1.59
DDX39A-219ENST00000592927 SPRR2BP35325 72 aa5.09□□□□□ -1.59
DDX39A-219ENST00000592927 SPRR2AP35326 72 aa5.09□□□□□ -1.59
DDX39A-219ENST00000592927 KRTAP10-5P60370 271 aa5.02□□□□□ -1.61
DDX39A-219ENST00000592927 PMAIP1Q13794 54 aa5.02□□□□□ -1.61
DDX39A-219ENST00000592927 CAMK2N1Q7Z7J9 78 aa5.02□□□□□ -1.61
DDX39A-219ENST00000592927 SPRR2FQ96RM1 72 aa5□□□□□ -1.61
DDX39A-219ENST00000592927 PRO2289Q9P1D8 64 aa4.98□□□□□ -1.61
DDX39A-219ENST00000592927 MT1XP80297 61 aa4.94□□□□□ -1.62
DDX39A-219ENST00000592927 SPRR2DP22532 72 aa4.93□□□□□ -1.62
DDX39A-219ENST00000592927 ROMO1P60602 79 aa4.93□□□□□ -1.62
DDX39A-219ENST00000592927 LCE1AQ5T7P2 110 aa4.92□□□□□ -1.62
DDX39A-219ENST00000592927 C10orf95Q9H7T3 257 aa4.87□□□□□ -1.63
DDX39A-219ENST00000592927 H3BS24 57 aa4.85□□□□□ -1.63
DDX39A-219ENST00000592927 LCE3BQ5TA77 95 aa4.85□□□□□ -1.63
DDX39A-219ENST00000592927 KTN1-AS1Q86SY8 53 aa4.81□□□□□ -1.64
DDX39A-219ENST00000592927 DSTQ03001 7570 aaKnown RBP4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms