RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 hDV103S1A0JD37 113 aa4.89□□□□□ -1.63
SKA2-208ENST00000583927 K7EQZ3 153 aa4.89□□□□□ -1.63
SKA2-208ENST00000583927 BPY2O14599 106 aa4.89□□□□□ -1.63
SKA2-208ENST00000583927 NDUFC1O43677 76 aa4.88□□□□□ -1.63
SKA2-208ENST00000583927 MT2AP02795 61 aa4.85□□□□□ -1.63
SKA2-208ENST00000583927 WFDC13Q8IUB5 93 aa4.85□□□□□ -1.63
SKA2-208ENST00000583927 C20orf197Q8N268 126 aa4.84□□□□□ -1.63
SKA2-208ENST00000583927 UBL5Q9BZL1 73 aa4.84□□□□□ -1.63
SKA2-208ENST00000583927 CXCL6P80162 114 aa4.83□□□□□ -1.64
SKA2-208ENST00000583927 USH2AO75445 5202 aa4.82□□□□□ -1.64
SKA2-208ENST00000583927 NDUFS5O43920 106 aa4.81□□□□□ -1.64
SKA2-208ENST00000583927 KRTAP4-11Q9BYQ6 195 aa4.81□□□□□ -1.64
SKA2-208ENST00000583927 MT1FP04733 61 aa4.8□□□□□ -1.64
SKA2-208ENST00000583927 CASC2Q6XLA1 102 aa4.8□□□□□ -1.64
SKA2-208ENST00000583927 Q5W150 140 aa4.79□□□□□ -1.64
SKA2-208ENST00000583927 C7orf65Q6ZTY9 151 aa4.79□□□□□ -1.64
SKA2-208ENST00000583927 Q8N9L7 120 aa4.79□□□□□ -1.64
SKA2-208ENST00000583927 KRTAP9-3Q9BYQ3 159 aa4.79□□□□□ -1.64
SKA2-208ENST00000583927 KRTAP9-7A8MTY7 169 aa4.78□□□□□ -1.64
SKA2-208ENST00000583927 HCG22E2RYF7 251 aa4.77□□□□□ -1.65
SKA2-208ENST00000583927 KRTAP10-10P60014 251 aa4.77□□□□□ -1.65
SKA2-208ENST00000583927 H1FX-AS1Q4G0G2 97 aa4.77□□□□□ -1.65
SKA2-208ENST00000583927 V9GYY9 64 aa4.76□□□□□ -1.65
SKA2-208ENST00000583927 SSPOA2VEC9 5147 aa4.75□□□□□ -1.65
SKA2-208ENST00000583927 IGKV2D-30A0A075B6S6 120 aa4.75□□□□□ -1.65
SKA2-208ENST00000583927 IGKV2-30P06310 120 aa4.75□□□□□ -1.65
SKA2-208ENST00000583927 SEC61GP60059 68 aa4.73□□□□□ -1.65
SKA2-208ENST00000583927 SNURFQ9Y675 71 aa4.72□□□□□ -1.65
SKA2-208ENST00000583927 OCR1Q9BZK8 76 aa4.71□□□□□ -1.66
SKA2-208ENST00000583927 TP53AIP1Q9HCN2 124 aa4.71□□□□□ -1.66
SKA2-208ENST00000583927 Q1T7F1 81 aa4.7□□□□□ -1.66
SKA2-208ENST00000583927 BRK1Q8WUW1 75 aa4.69□□□□□ -1.66
SKA2-208ENST00000583927 LCE5AQ5TCM9 118 aa4.67□□□□□ -1.66
SKA2-208ENST00000583927 FCGBPQ9Y6R7 5405 aaPredicted RBP4.67□□□□□ -1.66
SKA2-208ENST00000583927 CYP4F30PQ9H0H9 118 aa4.66□□□□□ -1.66
SKA2-208ENST00000583927 PMAIP1Q13794 54 aa4.64□□□□□ -1.67
SKA2-208ENST00000583927 KRTAP3-1Q9BYR8 98 aa4.63□□□□□ -1.67
SKA2-208ENST00000583927 KRTAP19-6Q3LI70 58 aa4.61□□□□□ -1.67
SKA2-208ENST00000583927 KRTAP19-4Q3LI73 84 aa4.6□□□□□ -1.67
SKA2-208ENST00000583927 C1orf64Q8NEQ6 169 aa4.6□□□□□ -1.67
SKA2-208ENST00000583927 TRAV22A0A0B4J277 110 aa4.59□□□□□ -1.67
SKA2-208ENST00000583927 S4R3F8 94 aa4.59□□□□□ -1.67
SKA2-208ENST00000583927 LOC101927531A0A1B0GV80 90 aa4.57□□□□□ -1.68
SKA2-208ENST00000583927 CSAG1Q6PB30 78 aa4.57□□□□□ -1.68
SKA2-208ENST00000583927 LCA10Q71F78 164 aa4.56□□□□□ -1.68
SKA2-208ENST00000583927 SPANXA2-OT1Q8N9U9 137 aa4.54□□□□□ -1.68
SKA2-208ENST00000583927 H3BPC8 53 aa4.53□□□□□ -1.68
SKA2-208ENST00000583927 Q5VV11 94 aa4.52□□□□□ -1.69
SKA2-208ENST00000583927 KTN1-AS1Q86SY8 53 aa4.51□□□□□ -1.69
SKA2-208ENST00000583927 SPRR2GQ9BYE4 73 aa4.5□□□□□ -1.69
SKA2-208ENST00000583927 H0Y9P7 68 aa4.49□□□□□ -1.69
SKA2-208ENST00000583927 A8MUN3 132 aa4.47□□□□□ -1.69
SKA2-208ENST00000583927 PSPHP1O15172 72 aa4.46□□□□□ -1.7
SKA2-208ENST00000583927 KRTAP19-8Q3LI54 63 aa4.46□□□□□ -1.7
SKA2-208ENST00000583927 A6NN06 94 aa4.45□□□□□ -1.7
SKA2-208ENST00000583927 KRTAP5-3Q6L8H2 238 aa4.45□□□□□ -1.7
SKA2-208ENST00000583927 H0YAA0 97 aa4.44□□□□□ -1.7
SKA2-208ENST00000583927 MP68P56378 58 aa4.44□□□□□ -1.7
SKA2-208ENST00000583927 LINC00208Q96KT6 92 aa4.44□□□□□ -1.7
SKA2-208ENST00000583927 CRIPTQ9P021 101 aa4.44□□□□□ -1.7
SKA2-208ENST00000583927 MT1BP07438 61 aa4.43□□□□□ -1.7
SKA2-208ENST00000583927 MACF1Q9UPN3 7388 aaKnown RBP4.42□□□□□ -1.7
SKA2-208ENST00000583927 CDC42SE1Q9NRR8 79 aa4.42□□□□□ -1.7
SKA2-208ENST00000583927 CHKB-CPT1BH3BT56 60 aa4.4□□□□□ -1.71
SKA2-208ENST00000583927 LINC01558Q9Y6Z2 57 aa4.4□□□□□ -1.71
SKA2-208ENST00000583927 A8MU10 97 aa4.39□□□□□ -1.71
SKA2-208ENST00000583927 PRR15LQ9BU68 103 aa4.38□□□□□ -1.71
SKA2-208ENST00000583927 KRTAP6-3Q3LI67 103 aa4.36□□□□□ -1.71
SKA2-208ENST00000583927 KRTAP10-5P60370 271 aa4.35□□□□□ -1.71
SKA2-208ENST00000583927 COA5Q86WW8 74 aa4.35□□□□□ -1.71
SKA2-208ENST00000583927 H3BS24 57 aa4.34□□□□□ -1.71
SKA2-208ENST00000583927 A6NED7 52 aa4.33□□□□□ -1.72
SKA2-208ENST00000583927 DMAC1Q96GE9 116 aa4.32□□□□□ -1.72
SKA2-208ENST00000583927 ADM2Q7Z4H4 148 aa4.3□□□□□ -1.72
SKA2-208ENST00000583927 SPTSSBQ8NFR3 76 aa4.3□□□□□ -1.72
SKA2-208ENST00000583927 SYNE2Q8WXH0 6885 aaKnown RBP4.29□□□□□ -1.72
SKA2-208ENST00000583927 MUC12Q9UKN1 5478 aa4.22□□□□□ -1.73
SKA2-208ENST00000583927 P0C880 135 aa4.21□□□□□ -1.74
SKA2-208ENST00000583927 ACYP2P14621 99 aa4.21□□□□□ -1.74
SKA2-208ENST00000583927 R4GN34 69 aa4.21□□□□□ -1.74
SKA2-208ENST00000583927 KRTAP5-9P26371 169 aa4.2□□□□□ -1.74
SKA2-208ENST00000583927 LINC01554Q52M75 96 aa4.19□□□□□ -1.74
SKA2-208ENST00000583927 SPATA8Q6RVD6 105 aa4.19□□□□□ -1.74
SKA2-208ENST00000583927 PRO2289Q9P1D8 64 aa4.19□□□□□ -1.74
SKA2-208ENST00000583927 PLAC4Q8WY50 150 aa4.18□□□□□ -1.74
SKA2-208ENST00000583927 MT1XP80297 61 aa4.16□□□□□ -1.74
SKA2-208ENST00000583927 M0QZ58 72 aa4.15□□□□□ -1.75
SKA2-208ENST00000583927 KMT2DO14686 5537 aa4.14□□□□□ -1.75
SKA2-208ENST00000583927 MDN1Q9NU22 5596 aa4.12□□□□□ -1.75
SKA2-208ENST00000583927 PRAC1Q96KF2 57 aa4.12□□□□□ -1.75
SKA2-208ENST00000583927 KRTAP12-2P59991 146 aa4.11□□□□□ -1.75
SKA2-208ENST00000583927 UQCR11O14957 56 aa4.08□□□□□ -1.76
SKA2-208ENST00000583927 A0A1B0GU69 56 aa4.07□□□□□ -1.76
SKA2-208ENST00000583927 MIR22HGQ0VDD5 57 aa4.06□□□□□ -1.76
SKA2-208ENST00000583927 NEBP20929 6669 aa4.02□□□□□ -1.77
SKA2-208ENST00000583927 KRTAP8-1Q8IUC2 63 aa4□□□□□ -1.77
SKA2-208ENST00000583927 SPRR2FQ96RM1 72 aa4□□□□□ -1.77
SKA2-208ENST00000583927 KRTAP20-1Q3LI63 56 aa3.99□□□□□ -1.77
SKA2-208ENST00000583927 KRTAP10-12P60413 245 aa3.98□□□□□ -1.77
SKA2-208ENST00000583927 KRTAP10-7P60409 375 aaPredicted RBP3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms