RNA–Protein interactions for RNA: ENST00000580315.1

CDC42EP4-205, Transcript of CDC42 effector protein 4, humanhuman

TSL 2

Gene CDC42EP4, Length 1,022 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-205ENST00000580315 FAM236BA0A1B0GV22 79 aa11.49□□□□□ -0.57
CDC42EP4-205ENST00000580315 MP68P56378 58 aa11.4□□□□□ -0.58
CDC42EP4-205ENST00000580315 LINC00208Q96KT6 92 aa11.4□□□□□ -0.58
CDC42EP4-205ENST00000580315 OCR1Q9BZK8 76 aa11.39□□□□□ -0.59
CDC42EP4-205ENST00000580315 KRTAP3-3Q9BYR6 98 aa11.37□□□□□ -0.59
CDC42EP4-205ENST00000580315 A8MUN3 132 aa11.31□□□□□ -0.6
CDC42EP4-205ENST00000580315 SCGB1A1P11684 91 aa11.29□□□□□ -0.6
CDC42EP4-205ENST00000580315 KLKP1Q107X0 134 aa11.28□□□□□ -0.6
CDC42EP4-205ENST00000580315 NDUFC1O43677 76 aa11.27□□□□□ -0.61
CDC42EP4-205ENST00000580315 NEBP20929 6669 aa11.26□□□□□ -0.61
CDC42EP4-205ENST00000580315 H3BPC8 53 aa11.24□□□□□ -0.61
CDC42EP4-205ENST00000580315 IMUPQ9GZP8 106 aa11.2□□□□□ -0.62
CDC42EP4-205ENST00000580315 SPRR2GQ9BYE4 73 aa11.19□□□□□ -0.62
CDC42EP4-205ENST00000580315 K7ERU9 68 aa11.17□□□□□ -0.62
CDC42EP4-205ENST00000580315 MUC12Q9UKN1 5478 aa11.14□□□□□ -0.63
CDC42EP4-205ENST00000580315 Q5VV11 94 aa11.13□□□□□ -0.63
CDC42EP4-205ENST00000580315 CRIPTQ9P021 101 aa11.13□□□□□ -0.63
CDC42EP4-205ENST00000580315 H0YAA0 97 aa11.1□□□□□ -0.63
CDC42EP4-205ENST00000580315 KRTAP19-8Q3LI54 63 aa11.09□□□□□ -0.63
CDC42EP4-205ENST00000580315 MT-ATP8P03928 68 aa11.08□□□□□ -0.64
CDC42EP4-205ENST00000580315 A6NN06 94 aa11.07□□□□□ -0.64
CDC42EP4-205ENST00000580315 MT1BP07438 61 aa11.05□□□□□ -0.64
CDC42EP4-205ENST00000580315 SMIM20Q8N5G0 67 aa11.02□□□□□ -0.65
CDC42EP4-205ENST00000580315 DMAC1Q96GE9 116 aa11□□□□□ -0.65
CDC42EP4-205ENST00000580315 ADM2Q7Z4H4 148 aa10.98□□□□□ -0.65
CDC42EP4-205ENST00000580315 TRAV7A0A075B6U4 112 aa10.95□□□□□ -0.66
CDC42EP4-205ENST00000580315 KRTAP20-1Q3LI63 56 aa10.92□□□□□ -0.66
CDC42EP4-205ENST00000580315 KRTAP10-5P60370 271 aa10.86□□□□□ -0.67
CDC42EP4-205ENST00000580315 KMT2DO14686 5537 aa10.82□□□□□ -0.68
CDC42EP4-205ENST00000580315 C20orf197Q8N268 126 aa10.82□□□□□ -0.68
CDC42EP4-205ENST00000580315 KRTAP5-9P26371 169 aa10.81□□□□□ -0.68
CDC42EP4-205ENST00000580315 MDN1Q9NU22 5596 aa10.8□□□□□ -0.68
CDC42EP4-205ENST00000580315 ACYP2P14621 99 aa10.8□□□□□ -0.68
CDC42EP4-205ENST00000580315 R4GN34 69 aa10.72□□□□□ -0.69
CDC42EP4-205ENST00000580315 P0C880 135 aa10.71□□□□□ -0.69
CDC42EP4-205ENST00000580315 SNURFQ9Y675 71 aa10.7□□□□□ -0.7
CDC42EP4-205ENST00000580315 SPTSSBQ8NFR3 76 aa10.69□□□□□ -0.7
CDC42EP4-205ENST00000580315 SERP2Q8N6R1 65 aa10.64□□□□□ -0.71
CDC42EP4-205ENST00000580315 CHKB-CPT1BH3BT56 60 aa10.63□□□□□ -0.71
CDC42EP4-205ENST00000580315 M0QZ58 72 aa10.63□□□□□ -0.71
CDC42EP4-205ENST00000580315 KRTAP3-2Q9BYR7 98 aa10.63□□□□□ -0.71
CDC42EP4-205ENST00000580315 PLAC4Q8WY50 150 aa10.6□□□□□ -0.71
CDC42EP4-205ENST00000580315 SPANXA2-OT1Q8N9U9 137 aa10.57□□□□□ -0.72
CDC42EP4-205ENST00000580315 PRO2289Q9P1D8 64 aa10.53□□□□□ -0.72
CDC42EP4-205ENST00000580315 KRTAP2-3P0C7H8 128 aa10.52□□□□□ -0.73
CDC42EP4-205ENST00000580315 KRTAP2-4Q9BYR9 128 aa10.52□□□□□ -0.73
CDC42EP4-205ENST00000580315 LINC01554Q52M75 96 aa10.47□□□□□ -0.73
CDC42EP4-205ENST00000580315 MT1XP80297 61 aa10.4□□□□□ -0.74
CDC42EP4-205ENST00000580315 SPRR2FQ96RM1 72 aa10.37□□□□□ -0.75
CDC42EP4-205ENST00000580315 COX7CP15954 63 aa10.34□□□□□ -0.75
CDC42EP4-205ENST00000580315 SPRR2EP22531 72 aa10.34□□□□□ -0.75
CDC42EP4-205ENST00000580315 SPRR2BP35325 72 aa10.34□□□□□ -0.75
CDC42EP4-205ENST00000580315 SPRR2AP35326 72 aa10.34□□□□□ -0.75
CDC42EP4-205ENST00000580315 COA5Q86WW8 74 aa10.25□□□□□ -0.77
CDC42EP4-205ENST00000580315 KRTAP8-1Q8IUC2 63 aa10.17□□□□□ -0.78
CDC42EP4-205ENST00000580315 KRTAP12-2P59991 146 aa10.16□□□□□ -0.78
CDC42EP4-205ENST00000580315 LCE1AQ5T7P2 110 aa10.15□□□□□ -0.78
CDC42EP4-205ENST00000580315 KRTAP2-2Q9BYT5 123 aa10.15□□□□□ -0.78
CDC42EP4-205ENST00000580315 KRTAP2-1Q9BYU5 128 aa10.15□□□□□ -0.78
CDC42EP4-205ENST00000580315 H7BZZ5 65 aa10.13□□□□□ -0.79
CDC42EP4-205ENST00000580315 SEC61GP60059 68 aa10.1□□□□□ -0.79
CDC42EP4-205ENST00000580315 CYSTM1Q9H1C7 97 aa10.08□□□□□ -0.8
CDC42EP4-205ENST00000580315 ANAPC13Q9BS18 74 aa10.06□□□□□ -0.8
CDC42EP4-205ENST00000580315 SERP1Q9Y6X1 66 aa10.06□□□□□ -0.8
CDC42EP4-205ENST00000580315 KRTAP13-4Q3LI77 160 aa10.05□□□□□ -0.8
CDC42EP4-205ENST00000580315 SPRR2DP22532 72 aa9.99□□□□□ -0.81
CDC42EP4-205ENST00000580315 KRTAP4-8A0A0G2JLE6 195 aa9.94□□□□□ -0.82
CDC42EP4-205ENST00000580315 KRTAP4-8Q9BYQ9 185 aa9.94□□□□□ -0.82
CDC42EP4-205ENST00000580315 KRTAP10-7P60409 375 aaPredicted RBP9.93□□□□□ -0.82
CDC42EP4-205ENST00000580315 KRTAP10-12P60413 245 aa9.9□□□□□ -0.82
CDC42EP4-205ENST00000580315 CAMK2N1Q7Z7J9 78 aa9.9□□□□□ -0.82
CDC42EP4-205ENST00000580315 A0A1B0GU33 70 aa9.86□□□□□ -0.83
CDC42EP4-205ENST00000580315 A0A0D9SG42 100 aa9.82□□□□□ -0.84
CDC42EP4-205ENST00000580315 CCDC179H3BU77 68 aa9.81□□□□□ -0.84
CDC42EP4-205ENST00000580315 SPATA8Q6RVD6 105 aa9.8□□□□□ -0.84
CDC42EP4-205ENST00000580315 LCE3BQ5TA77 95 aa9.77□□□□□ -0.85
CDC42EP4-205ENST00000580315 A0A1B0GU69 56 aa9.76□□□□□ -0.85
CDC42EP4-205ENST00000580315 ATP5EP56381 51 aaPredicted RBP9.73□□□□□ -0.85
CDC42EP4-205ENST00000580315 SPINT4Q6UDR6 99 aa9.69□□□□□ -0.86
CDC42EP4-205ENST00000580315 SMIM26A0A096LP01 95 aa9.62□□□□□ -0.87
CDC42EP4-205ENST00000580315 KRTAP12-1P59990 96 aa9.59□□□□□ -0.87
CDC42EP4-205ENST00000580315 PRR15LQ9BU68 103 aa9.55□□□□□ -0.88
CDC42EP4-205ENST00000580315 GPR98Q8WXG9 6306 aa9.5□□□□□ -0.89
CDC42EP4-205ENST00000580315 TMEM258P61165 79 aa9.5□□□□□ -0.89
CDC42EP4-205ENST00000580315 A8MU10 97 aa9.46□□□□□ -0.9
CDC42EP4-205ENST00000580315 LINC01558Q9Y6Z2 57 aa9.42□□□□□ -0.9
CDC42EP4-205ENST00000580315 DSTQ03001 7570 aaKnown RBP9.42□□□□□ -0.9
CDC42EP4-205ENST00000580315 KRTAP19-7Q3SYF9 63 aa9.29□□□□□ -0.92
CDC42EP4-205ENST00000580315 KRTAP4-9Q9BYQ8 210 aa9.24□□□□□ -0.93
CDC42EP4-205ENST00000580315 MT1EP04732 61 aa9.22□□□□□ -0.93
CDC42EP4-205ENST00000580315 UQCR11O14957 56 aa9.21□□□□□ -0.94
CDC42EP4-205ENST00000580315 LCE5AQ5TCM9 118 aa9.2□□□□□ -0.94
CDC42EP4-205ENST00000580315 TNP1P09430 55 aa9.16□□□□□ -0.94
CDC42EP4-205ENST00000580315 C10orf95Q9H7T3 257 aa9.15□□□□□ -0.94
CDC42EP4-205ENST00000580315 KRTAP19-3Q7Z4W3 81 aa9.13□□□□□ -0.95
CDC42EP4-205ENST00000580315 KRTAP19-5Q3LI72 72 aa9.12□□□□□ -0.95
CDC42EP4-205ENST00000580315 V9GYY9 64 aa9.01□□□□□ -0.97
CDC42EP4-205ENST00000580315 MIR22HGQ0VDD5 57 aa9□□□□□ -0.97
CDC42EP4-205ENST00000580315 LCE3AQ5TA76 89 aa9□□□□□ -0.97
CDC42EP4-205ENST00000580315 LCE1DQ5T752 114 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms