RNA–Protein interactions for RNA: ENST00000579122.1

CDKN2A-213, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3 BASIC

Gene CDKN2A, Length 666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-213ENST00000579122 SERP2Q8N6R1 65 aa9.07□□□□□ -0.96
CDKN2A-213ENST00000579122 IGKV2D-30A0A075B6S6 120 aa9.04□□□□□ -0.96
CDKN2A-213ENST00000579122 IGKV2-30P06310 120 aa9.04□□□□□ -0.96
CDKN2A-213ENST00000579122 LINC00208Q96KT6 92 aa9.02□□□□□ -0.97
CDKN2A-213ENST00000579122 ANAPC13Q9BS18 74 aa9.02□□□□□ -0.97
CDKN2A-213ENST00000579122 KRTAP4-8Q9BYQ9 185 aa9.02□□□□□ -0.97
CDKN2A-213ENST00000579122 LOC101927531A0A1B0GV80 90 aa9.01□□□□□ -0.97
CDKN2A-213ENST00000579122 C7orf65Q6ZTY9 151 aa9.01□□□□□ -0.97
CDKN2A-213ENST00000579122 C1orf64Q8NEQ6 169 aa9.01□□□□□ -0.97
CDKN2A-213ENST00000579122 H3BPC8 53 aa9□□□□□ -0.97
CDKN2A-213ENST00000579122 H1FX-AS1Q4G0G2 97 aa8.99□□□□□ -0.97
CDKN2A-213ENST00000579122 NEBP20929 6669 aa8.98□□□□□ -0.97
CDKN2A-213ENST00000579122 COX7CP15954 63 aa8.97□□□□□ -0.97
CDKN2A-213ENST00000579122 CYP4F30PQ9H0H9 118 aa8.97□□□□□ -0.97
CDKN2A-213ENST00000579122 C20orf197Q8N268 126 aa8.93□□□□□ -0.98
CDKN2A-213ENST00000579122 MUC12Q9UKN1 5478 aa8.9□□□□□ -0.98
CDKN2A-213ENST00000579122 SNURFQ9Y675 71 aa8.9□□□□□ -0.98
CDKN2A-213ENST00000579122 KLKP1Q107X0 134 aa8.88□□□□□ -0.99
CDKN2A-213ENST00000579122 CCDC179H3BU77 68 aa8.83□□□□□ -1
CDKN2A-213ENST00000579122 C4orf26Q17RF5 130 aa8.82□□□□□ -1
CDKN2A-213ENST00000579122 A6NN06 94 aa8.77□□□□□ -1.01
CDKN2A-213ENST00000579122 CYSTM1Q9H1C7 97 aa8.75□□□□□ -1.01
CDKN2A-213ENST00000579122 NDUFC1O43677 76 aa8.73□□□□□ -1.01
CDKN2A-213ENST00000579122 MT1BP07438 61 aa8.71□□□□□ -1.02
CDKN2A-213ENST00000579122 KRTAP3-1Q9BYR8 98 aa8.7□□□□□ -1.02
CDKN2A-213ENST00000579122 H7BZZ5 65 aa8.69□□□□□ -1.02
CDKN2A-213ENST00000579122 PCP4P48539 62 aa8.69□□□□□ -1.02
CDKN2A-213ENST00000579122 Q5VV11 94 aa8.68□□□□□ -1.02
CDKN2A-213ENST00000579122 KRTAP20-1Q3LI63 56 aa8.66□□□□□ -1.02
CDKN2A-213ENST00000579122 SPANXA2-OT1Q8N9U9 137 aa8.65□□□□□ -1.02
CDKN2A-213ENST00000579122 KRTAP19-8Q3LI54 63 aa8.64□□□□□ -1.03
CDKN2A-213ENST00000579122 SPRR2GQ9BYE4 73 aa8.63□□□□□ -1.03
CDKN2A-213ENST00000579122 MDN1Q9NU22 5596 aa8.63□□□□□ -1.03
CDKN2A-213ENST00000579122 A8MUN3 132 aa8.62□□□□□ -1.03
CDKN2A-213ENST00000579122 DMAC1Q96GE9 116 aa8.61□□□□□ -1.03
CDKN2A-213ENST00000579122 KRTAP10-5P60370 271 aa8.6□□□□□ -1.03
CDKN2A-213ENST00000579122 KMT2DO14686 5537 aa8.58□□□□□ -1.04
CDKN2A-213ENST00000579122 KRTAP5-9P26371 169 aa8.58□□□□□ -1.04
CDKN2A-213ENST00000579122 S4R3F8 94 aa8.57□□□□□ -1.04
CDKN2A-213ENST00000579122 CSAG1Q6PB30 78 aa8.56□□□□□ -1.04
CDKN2A-213ENST00000579122 ACYP2P14621 99 aa8.54□□□□□ -1.04
CDKN2A-213ENST00000579122 LCE3BQ5TA77 95 aa8.51□□□□□ -1.05
CDKN2A-213ENST00000579122 TMEM258P61165 79 aa8.5□□□□□ -1.05
CDKN2A-213ENST00000579122 LCA10Q71F78 164 aa8.5□□□□□ -1.05
CDKN2A-213ENST00000579122 ATP5EP56381 51 aaPredicted RBP8.47□□□□□ -1.05
CDKN2A-213ENST00000579122 KRTAP4-12Q9BQ66 201 aa8.45□□□□□ -1.06
CDKN2A-213ENST00000579122 KRTAP9-9Q9BYP9 154 aa8.45□□□□□ -1.06
CDKN2A-213ENST00000579122 KRTAP9-4Q9BYQ2 154 aa8.45□□□□□ -1.06
CDKN2A-213ENST00000579122 CHKB-CPT1BH3BT56 60 aa8.4□□□□□ -1.06
CDKN2A-213ENST00000579122 COA5Q86WW8 74 aa8.39□□□□□ -1.07
CDKN2A-213ENST00000579122 KRTAP4-8A0A0G2JLE6 195 aa8.38□□□□□ -1.07
CDKN2A-213ENST00000579122 CRIPTQ9P021 101 aa8.36□□□□□ -1.07
CDKN2A-213ENST00000579122 KRTAP2-3P0C7H8 128 aa8.34□□□□□ -1.07
CDKN2A-213ENST00000579122 KRTAP2-4Q9BYR9 128 aa8.34□□□□□ -1.07
CDKN2A-213ENST00000579122 SPTSSBQ8NFR3 76 aa8.3□□□□□ -1.08
CDKN2A-213ENST00000579122 SERP1Q9Y6X1 66 aa8.24□□□□□ -1.09
CDKN2A-213ENST00000579122 SPRR2FQ96RM1 72 aa8.21□□□□□ -1.1
CDKN2A-213ENST00000579122 SPRR2EP22531 72 aa8.18□□□□□ -1.1
CDKN2A-213ENST00000579122 SPRR2BP35325 72 aa8.18□□□□□ -1.1
CDKN2A-213ENST00000579122 SPRR2AP35326 72 aa8.18□□□□□ -1.1
CDKN2A-213ENST00000579122 H0YAA0 97 aa8.13□□□□□ -1.11
CDKN2A-213ENST00000579122 PRO2289Q9P1D8 64 aa8.13□□□□□ -1.11
CDKN2A-213ENST00000579122 KRTAP4-7Q9BYR0 210 aa8.11□□□□□ -1.11
CDKN2A-213ENST00000579122 ADM2Q7Z4H4 148 aa8.1□□□□□ -1.11
CDKN2A-213ENST00000579122 RPS28P62857 69 aaKnown RBP8.09□□□□□ -1.11
CDKN2A-213ENST00000579122 MT1XP80297 61 aa8.07□□□□□ -1.12
CDKN2A-213ENST00000579122 KRTAP8-1Q8IUC2 63 aa8.05□□□□□ -1.12
CDKN2A-213ENST00000579122 KRTAP2-2Q9BYT5 123 aa8.05□□□□□ -1.12
CDKN2A-213ENST00000579122 KRTAP2-1Q9BYU5 128 aa8.05□□□□□ -1.12
CDKN2A-213ENST00000579122 LCE1AQ5T7P2 110 aa8.03□□□□□ -1.12
CDKN2A-213ENST00000579122 SEC61GP60059 68 aa8.01□□□□□ -1.13
CDKN2A-213ENST00000579122 P0C880 135 aa8□□□□□ -1.13
CDKN2A-213ENST00000579122 SMIM26A0A096LP01 95 aa7.99□□□□□ -1.13
CDKN2A-213ENST00000579122 KRTAP12-2P59991 146 aa7.98□□□□□ -1.13
CDKN2A-213ENST00000579122 PLAC4Q8WY50 150 aa7.98□□□□□ -1.13
CDKN2A-213ENST00000579122 LINC01558Q9Y6Z2 57 aa7.98□□□□□ -1.13
CDKN2A-213ENST00000579122 A0A1B0GU69 56 aa7.95□□□□□ -1.14
CDKN2A-213ENST00000579122 LCE1DQ5T752 114 aa7.95□□□□□ -1.14
CDKN2A-213ENST00000579122 SPRR2DP22532 72 aa7.92□□□□□ -1.14
CDKN2A-213ENST00000579122 V9GYY9 64 aa7.91□□□□□ -1.14
CDKN2A-213ENST00000579122 Q1T7F1 81 aa7.9□□□□□ -1.14
CDKN2A-213ENST00000579122 PRR15LQ9BU68 103 aa7.89□□□□□ -1.15
CDKN2A-213ENST00000579122 R4GN34 69 aa7.84□□□□□ -1.15
CDKN2A-213ENST00000579122 A0A1B0GU33 70 aa7.82□□□□□ -1.16
CDKN2A-213ENST00000579122 KRTAP4-9Q9BYQ8 210 aa7.82□□□□□ -1.16
CDKN2A-213ENST00000579122 KRTAP4-2Q9BYR5 136 aa7.81□□□□□ -1.16
CDKN2A-213ENST00000579122 M0QZ58 72 aa7.8□□□□□ -1.16
CDKN2A-213ENST00000579122 PSPHP1O15172 72 aa7.78□□□□□ -1.16
CDKN2A-213ENST00000579122 KRTAP13-4Q3LI77 160 aa7.73□□□□□ -1.17
CDKN2A-213ENST00000579122 KRTAP10-7P60409 375 aaPredicted RBP7.69□□□□□ -1.18
CDKN2A-213ENST00000579122 SPATA8Q6RVD6 105 aa7.69□□□□□ -1.18
CDKN2A-213ENST00000579122 KRTAP10-12P60413 245 aa7.67□□□□□ -1.18
CDKN2A-213ENST00000579122 LINC01554Q52M75 96 aa7.67□□□□□ -1.18
CDKN2A-213ENST00000579122 UQCR11O14957 56 aa7.65□□□□□ -1.18
CDKN2A-213ENST00000579122 GPR98Q8WXG9 6306 aa7.61□□□□□ -1.19
CDKN2A-213ENST00000579122 A0A0D9SG42 100 aa7.58□□□□□ -1.2
CDKN2A-213ENST00000579122 A6NED7 52 aa7.55□□□□□ -1.2
CDKN2A-213ENST00000579122 MIR22HGQ0VDD5 57 aa7.55□□□□□ -1.2
CDKN2A-213ENST00000579122 A8MU10 97 aa7.54□□□□□ -1.2
CDKN2A-213ENST00000579122 DSTQ03001 7570 aaKnown RBP7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms