RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 A0A1B0GV90 55 aa4.08□□□□□ -1.76
SMG6-210ENST00000572205 ACYP1P07311 99 aa4.05□□□□□ -1.76
SMG6-210ENST00000572205 ATP5EP2Q5VTU8 51 aa4.04□□□□□ -1.76
SMG6-210ENST00000572205 TP53AIP1Q9HCN2 124 aa4.04□□□□□ -1.76
SMG6-210ENST00000572205 LCE1AQ5T7P2 110 aa4.03□□□□□ -1.76
SMG6-210ENST00000572205 A0A087WVE0 104 aa4.02□□□□□ -1.77
SMG6-210ENST00000572205 KRTAP19-6Q3LI70 58 aa4.01□□□□□ -1.77
SMG6-210ENST00000572205 CYP4F30PQ9H0H9 118 aa4.01□□□□□ -1.77
SMG6-210ENST00000572205 TRAV22A0A0B4J277 110 aa4□□□□□ -1.77
SMG6-210ENST00000572205 LCA10Q71F78 164 aa4□□□□□ -1.77
SMG6-210ENST00000572205 LINC00643Q86TS7 51 aa3.99□□□□□ -1.77
SMG6-210ENST00000572205 C1orf64Q8NEQ6 169 aa3.99□□□□□ -1.77
SMG6-210ENST00000572205 V9GYY9 64 aa3.98□□□□□ -1.77
SMG6-210ENST00000572205 MACF1Q9UPN3 7388 aaKnown RBP3.98□□□□□ -1.77
SMG6-210ENST00000572205 S4R3F8 94 aa3.97□□□□□ -1.77
SMG6-210ENST00000572205 LOC101927531A0A1B0GV80 90 aa3.96□□□□□ -1.78
SMG6-210ENST00000572205 C5orf47Q569G3 176 aa3.96□□□□□ -1.78
SMG6-210ENST00000572205 KRTAP4-9Q9BYQ8 210 aa3.96□□□□□ -1.78
SMG6-210ENST00000572205 MT1BP07438 61 aa3.95□□□□□ -1.78
SMG6-210ENST00000572205 HIST1H4AP62805 103 aaKnown RBP3.95□□□□□ -1.78
SMG6-210ENST00000572205 UQCRQO14949 82 aa3.94□□□□□ -1.78
SMG6-210ENST00000572205 H0Y9P7 68 aa3.93□□□□□ -1.78
SMG6-210ENST00000572205 SPRR2GQ9BYE4 73 aa3.93□□□□□ -1.78
SMG6-210ENST00000572205 SYNE2Q8WXH0 6885 aaKnown RBP3.92□□□□□ -1.78
SMG6-210ENST00000572205 KLKP1Q107X0 134 aa3.92□□□□□ -1.78
SMG6-210ENST00000572205 KRTAP19-8Q3LI54 63 aa3.92□□□□□ -1.78
SMG6-210ENST00000572205 KRTAP4-11Q9BYQ6 195 aa3.91□□□□□ -1.78
SMG6-210ENST00000572205 ATOX1O00244 68 aa3.89□□□□□ -1.79
SMG6-210ENST00000572205 CSAG1Q6PB30 78 aa3.89□□□□□ -1.79
SMG6-210ENST00000572205 KRTAP4-7Q9BYR0 210 aa3.89□□□□□ -1.79
SMG6-210ENST00000572205 LINC00208Q96KT6 92 aa3.86□□□□□ -1.79
SMG6-210ENST00000572205 H0YAA0 97 aa3.84□□□□□ -1.79
SMG6-210ENST00000572205 A8MUN3 132 aa3.83□□□□□ -1.8
SMG6-210ENST00000572205 MT-ATP8P03928 68 aa3.83□□□□□ -1.8
SMG6-210ENST00000572205 FAM236AA0A1B0GUQ0 79 aa3.82□□□□□ -1.8
SMG6-210ENST00000572205 FAM236BA0A1B0GV22 79 aa3.82□□□□□ -1.8
SMG6-210ENST00000572205 J3QR89 54 aa3.82□□□□□ -1.8
SMG6-210ENST00000572205 SMIM26A0A096LP01 95 aa3.81□□□□□ -1.8
SMG6-210ENST00000572205 DMAC1Q96GE9 116 aa3.81□□□□□ -1.8
SMG6-210ENST00000572205 H3BPC8 53 aa3.8□□□□□ -1.8
SMG6-210ENST00000572205 KRTAP10-5P60370 271 aa3.8□□□□□ -1.8
SMG6-210ENST00000572205 Q5VV11 94 aa3.79□□□□□ -1.8
SMG6-210ENST00000572205 IMUPQ9GZP8 106 aa3.79□□□□□ -1.8
SMG6-210ENST00000572205 MP68P56378 58 aa3.78□□□□□ -1.8
SMG6-210ENST00000572205 CAMK2N1Q7Z7J9 78 aa3.78□□□□□ -1.8
SMG6-210ENST00000572205 MT3P25713 68 aa3.77□□□□□ -1.81
SMG6-210ENST00000572205 CRIPTQ9P021 101 aa3.77□□□□□ -1.81
SMG6-210ENST00000572205 NDUFC1O43677 76 aa3.76□□□□□ -1.81
SMG6-210ENST00000572205 K7ERU9 68 aa3.75□□□□□ -1.81
SMG6-210ENST00000572205 P0C880 135 aa3.74□□□□□ -1.81
SMG6-210ENST00000572205 KRTAP6-3Q3LI67 103 aa3.74□□□□□ -1.81
SMG6-210ENST00000572205 MUC12Q9UKN1 5478 aa3.74□□□□□ -1.81
SMG6-210ENST00000572205 ADM2Q7Z4H4 148 aa3.73□□□□□ -1.81
SMG6-210ENST00000572205 TRAV7A0A075B6U4 112 aa3.72□□□□□ -1.81
SMG6-210ENST00000572205 A6NN06 94 aa3.72□□□□□ -1.81
SMG6-210ENST00000572205 KRTAP4-2Q9BYR5 136 aa3.72□□□□□ -1.81
SMG6-210ENST00000572205 KMT2DO14686 5537 aa3.71□□□□□ -1.82
SMG6-210ENST00000572205 SCGB1A1P11684 91 aa3.7□□□□□ -1.82
SMG6-210ENST00000572205 MT1XP80297 61 aa3.7□□□□□ -1.82
SMG6-210ENST00000572205 NEBP20929 6669 aa3.7□□□□□ -1.82
SMG6-210ENST00000572205 PSPHP1O15172 72 aa3.68□□□□□ -1.82
SMG6-210ENST00000572205 LCE1FQ5T754 118 aa3.68□□□□□ -1.82
SMG6-210ENST00000572205 SMIM20Q8N5G0 67 aa3.67□□□□□ -1.82
SMG6-210ENST00000572205 MDN1Q9NU22 5596 aa3.66□□□□□ -1.82
SMG6-210ENST00000572205 KRTAP5-9P26371 169 aa3.66□□□□□ -1.82
SMG6-210ENST00000572205 KRTAP2-2Q9BYT5 123 aa3.66□□□□□ -1.82
SMG6-210ENST00000572205 SNURFQ9Y675 71 aa3.65□□□□□ -1.83
SMG6-210ENST00000572205 SERP2Q8N6R1 65 aa3.61□□□□□ -1.83
SMG6-210ENST00000572205 SPANXA2-OT1Q8N9U9 137 aa3.61□□□□□ -1.83
SMG6-210ENST00000572205 PRO0628Q9UI54 55 aa3.61□□□□□ -1.83
SMG6-210ENST00000572205 ACYP2P14621 99 aa3.6□□□□□ -1.83
SMG6-210ENST00000572205 C20orf197Q8N268 126 aa3.6□□□□□ -1.83
SMG6-210ENST00000572205 CYSTM1Q9H1C7 97 aa3.6□□□□□ -1.83
SMG6-210ENST00000572205 R4GN34 69 aa3.6□□□□□ -1.83
SMG6-210ENST00000572205 M0QZ58 72 aa3.59□□□□□ -1.83
SMG6-210ENST00000572205 KRTAP12-2P59991 146 aa3.57□□□□□ -1.84
SMG6-210ENST00000572205 KRTAP13-4Q3LI77 160 aa3.57□□□□□ -1.84
SMG6-210ENST00000572205 H7BZZ5 65 aa3.52□□□□□ -1.85
SMG6-210ENST00000572205 COX7CP15954 63 aa3.52□□□□□ -1.85
SMG6-210ENST00000572205 PRO2289Q9P1D8 64 aa3.52□□□□□ -1.85
SMG6-210ENST00000572205 KRTAP10-7P60409 375 aaPredicted RBP3.51□□□□□ -1.85
SMG6-210ENST00000572205 PLAC4Q8WY50 150 aa3.51□□□□□ -1.85
SMG6-210ENST00000572205 KRTAP10-12P60413 245 aa3.5□□□□□ -1.85
SMG6-210ENST00000572205 LINC01554Q52M75 96 aa3.5□□□□□ -1.85
SMG6-210ENST00000572205 COA5Q86WW8 74 aa3.5□□□□□ -1.85
SMG6-210ENST00000572205 SPTSSBQ8NFR3 76 aa3.49□□□□□ -1.85
SMG6-210ENST00000572205 CHKB-CPT1BH3BT56 60 aa3.48□□□□□ -1.85
SMG6-210ENST00000572205 LUZP6Q538Z0 58 aa3.48□□□□□ -1.85
SMG6-210ENST00000572205 ANAPC13Q9BS18 74 aa3.47□□□□□ -1.85
SMG6-210ENST00000572205 SPRR2FQ96RM1 72 aa3.46□□□□□ -1.86
SMG6-210ENST00000572205 KRTAP8-1Q8IUC2 63 aa3.44□□□□□ -1.86
SMG6-210ENST00000572205 CCDC179H3BU77 68 aa3.39□□□□□ -1.87
SMG6-210ENST00000572205 KRTAP20-1Q3LI63 56 aa3.39□□□□□ -1.87
SMG6-210ENST00000572205 LCE3CQ5T5A8 94 aa3.39□□□□□ -1.87
SMG6-210ENST00000572205 SPRR2EP22531 72 aa3.38□□□□□ -1.87
SMG6-210ENST00000572205 SPRR2BP35325 72 aa3.38□□□□□ -1.87
SMG6-210ENST00000572205 SPRR2AP35326 72 aa3.38□□□□□ -1.87
SMG6-210ENST00000572205 SPATA8Q6RVD6 105 aa3.35□□□□□ -1.87
SMG6-210ENST00000572205 KRTAP12-1P59990 96 aa3.34□□□□□ -1.87
SMG6-210ENST00000572205 KRTAP19-7Q3SYF9 63 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms