RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 KRTAP19-8Q3LI54 63 aa8.42□□□□□ -1.06
NME3-204ENST00000563498 SPRR2GQ9BYE4 73 aa8.41□□□□□ -1.06
NME3-204ENST00000563498 KRTAP5-9P26371 169 aa8.4□□□□□ -1.06
NME3-204ENST00000563498 C4orf26Q17RF5 130 aa8.4□□□□□ -1.06
NME3-204ENST00000563498 KRTAP10-5P60370 271 aa8.39□□□□□ -1.07
NME3-204ENST00000563498 ATP5EP2Q5VTU8 51 aa8.37□□□□□ -1.07
NME3-204ENST00000563498 KMT2DO14686 5537 aa8.33□□□□□ -1.08
NME3-204ENST00000563498 CSAG1Q6PB30 78 aa8.31□□□□□ -1.08
NME3-204ENST00000563498 PRO0628Q9UI54 55 aa8.31□□□□□ -1.08
NME3-204ENST00000563498 SERP1Q9Y6X1 66 aa8.31□□□□□ -1.08
NME3-204ENST00000563498 MDN1Q9NU22 5596 aa8.31□□□□□ -1.08
NME3-204ENST00000563498 BPY2O14599 106 aa8.3□□□□□ -1.08
NME3-204ENST00000563498 S4R3F8 94 aa8.3□□□□□ -1.08
NME3-204ENST00000563498 HCG22E2RYF7 251 aa8.28□□□□□ -1.08
NME3-204ENST00000563498 CASC2Q6XLA1 102 aa8.28□□□□□ -1.08
NME3-204ENST00000563498 KRTAP3-1Q9BYR8 98 aa8.28□□□□□ -1.08
NME3-204ENST00000563498 CXCL6P80162 114 aa8.27□□□□□ -1.09
NME3-204ENST00000563498 CYSTM1Q9H1C7 97 aa8.25□□□□□ -1.09
NME3-204ENST00000563498 ATP5EP56381 51 aaPredicted RBP8.24□□□□□ -1.09
NME3-204ENST00000563498 LCA10Q71F78 164 aa8.24□□□□□ -1.09
NME3-204ENST00000563498 SMIM26A0A096LP01 95 aa8.23□□□□□ -1.09
NME3-204ENST00000563498 KLKP1Q107X0 134 aa8.23□□□□□ -1.09
NME3-204ENST00000563498 TRAV7A0A075B6U4 112 aa8.22□□□□□ -1.09
NME3-204ENST00000563498 Q8N9L7 120 aa8.21□□□□□ -1.1
NME3-204ENST00000563498 NDUFC1O43677 76 aa8.2□□□□□ -1.1
NME3-204ENST00000563498 C1orf64Q8NEQ6 169 aa8.2□□□□□ -1.1
NME3-204ENST00000563498 KRTAP2-3P0C7H8 128 aa8.17□□□□□ -1.1
NME3-204ENST00000563498 KRTAP2-4Q9BYR9 128 aa8.17□□□□□ -1.1
NME3-204ENST00000563498 A0A087WVE0 104 aa8.15□□□□□ -1.1
NME3-204ENST00000563498 H7BZZ5 65 aa8.14□□□□□ -1.11
NME3-204ENST00000563498 UBL5Q9BZL1 73 aa8.14□□□□□ -1.11
NME3-204ENST00000563498 CRIPTQ9P021 101 aa8.13□□□□□ -1.11
NME3-204ENST00000563498 C20orf197Q8N268 126 aa8.12□□□□□ -1.11
NME3-204ENST00000563498 KRTAP3-3Q9BYR6 98 aa8.08□□□□□ -1.12
NME3-204ENST00000563498 V9GYY9 64 aa8.05□□□□□ -1.12
NME3-204ENST00000563498 SEC61GP60059 68 aa8.01□□□□□ -1.13
NME3-204ENST00000563498 SPRR2FQ96RM1 72 aa8.01□□□□□ -1.13
NME3-204ENST00000563498 TP53AIP1Q9HCN2 124 aa8□□□□□ -1.13
NME3-204ENST00000563498 SPRR2EP22531 72 aa7.99□□□□□ -1.13
NME3-204ENST00000563498 SPRR2BP35325 72 aa7.99□□□□□ -1.13
NME3-204ENST00000563498 SPRR2AP35326 72 aa7.99□□□□□ -1.13
NME3-204ENST00000563498 BRK1Q8WUW1 75 aa7.93□□□□□ -1.14
NME3-204ENST00000563498 PRO2289Q9P1D8 64 aa7.92□□□□□ -1.14
NME3-204ENST00000563498 SNURFQ9Y675 71 aa7.92□□□□□ -1.14
NME3-204ENST00000563498 CYP4F30PQ9H0H9 118 aa7.9□□□□□ -1.14
NME3-204ENST00000563498 H0YAA0 97 aa7.89□□□□□ -1.15
NME3-204ENST00000563498 KRTAP2-2Q9BYT5 123 aa7.88□□□□□ -1.15
NME3-204ENST00000563498 KRTAP2-1Q9BYU5 128 aa7.88□□□□□ -1.15
NME3-204ENST00000563498 MT1XP80297 61 aa7.85□□□□□ -1.15
NME3-204ENST00000563498 Q1T7F1 81 aa7.85□□□□□ -1.15
NME3-204ENST00000563498 LCE1AQ5T7P2 110 aa7.85□□□□□ -1.15
NME3-204ENST00000563498 KRTAP8-1Q8IUC2 63 aa7.85□□□□□ -1.15
NME3-204ENST00000563498 PMAIP1Q13794 54 aa7.83□□□□□ -1.16
NME3-204ENST00000563498 OCR1Q9BZK8 76 aa7.83□□□□□ -1.16
NME3-204ENST00000563498 A8MUN3 132 aa7.8□□□□□ -1.16
NME3-204ENST00000563498 LOC101927531A0A1B0GV80 90 aa7.79□□□□□ -1.16
NME3-204ENST00000563498 KRTAP12-2P59991 146 aa7.78□□□□□ -1.16
NME3-204ENST00000563498 TRAV22A0A0B4J277 110 aa7.76□□□□□ -1.17
NME3-204ENST00000563498 PLAC4Q8WY50 150 aa7.75□□□□□ -1.17
NME3-204ENST00000563498 ADM2Q7Z4H4 148 aa7.74□□□□□ -1.17
NME3-204ENST00000563498 SPRR2DP22532 72 aa7.73□□□□□ -1.17
NME3-204ENST00000563498 KRTAP4-8A0A0G2JLE6 195 aa7.63□□□□□ -1.19
NME3-204ENST00000563498 KRTAP4-8Q9BYQ9 185 aa7.63□□□□□ -1.19
NME3-204ENST00000563498 R4GN34 69 aa7.6□□□□□ -1.19
NME3-204ENST00000563498 H3BPC8 53 aa7.58□□□□□ -1.2
NME3-204ENST00000563498 SPANXA2-OT1Q8N9U9 137 aa7.58□□□□□ -1.2
NME3-204ENST00000563498 LCE3BQ5TA77 95 aa7.57□□□□□ -1.2
NME3-204ENST00000563498 KTN1-AS1Q86SY8 53 aa7.57□□□□□ -1.2
NME3-204ENST00000563498 H0Y9P7 68 aa7.55□□□□□ -1.2
NME3-204ENST00000563498 PSPHP1O15172 72 aa7.51□□□□□ -1.21
NME3-204ENST00000563498 MP68P56378 58 aa7.51□□□□□ -1.21
NME3-204ENST00000563498 M0QZ58 72 aa7.5□□□□□ -1.21
NME3-204ENST00000563498 P0C880 135 aa7.5□□□□□ -1.21
NME3-204ENST00000563498 KRTAP10-7P60409 375 aaPredicted RBP7.47□□□□□ -1.21
NME3-204ENST00000563498 KRTAP10-12P60413 245 aa7.47□□□□□ -1.21
NME3-204ENST00000563498 LINC00208Q96KT6 92 aa7.45□□□□□ -1.22
NME3-204ENST00000563498 CHKB-CPT1BH3BT56 60 aa7.43□□□□□ -1.22
NME3-204ENST00000563498 CDC42SE1Q9NRR8 79 aa7.41□□□□□ -1.22
NME3-204ENST00000563498 LINC01554Q52M75 96 aa7.4□□□□□ -1.22
NME3-204ENST00000563498 GPR98Q8WXG9 6306 aa7.38□□□□□ -1.23
NME3-204ENST00000563498 PRR15LQ9BU68 103 aa7.38□□□□□ -1.23
NME3-204ENST00000563498 KRTAP3-2Q9BYR7 98 aa7.38□□□□□ -1.23
NME3-204ENST00000563498 LINC01558Q9Y6Z2 57 aa7.35□□□□□ -1.23
NME3-204ENST00000563498 A6NED7 52 aa7.33□□□□□ -1.24
NME3-204ENST00000563498 SPTSSBQ8NFR3 76 aa7.3□□□□□ -1.24
NME3-204ENST00000563498 COA5Q86WW8 74 aa7.29□□□□□ -1.24
NME3-204ENST00000563498 A8MU10 97 aa7.27□□□□□ -1.25
NME3-204ENST00000563498 DMAC1Q96GE9 116 aa7.26□□□□□ -1.25
NME3-204ENST00000563498 DSTQ03001 7570 aaKnown RBP7.22□□□□□ -1.25
NME3-204ENST00000563498 KRTAP4-9Q9BYQ8 210 aa7.12□□□□□ -1.27
NME3-204ENST00000563498 LCE5AQ5TCM9 118 aa7.11□□□□□ -1.27
NME3-204ENST00000563498 KRTAP19-7Q3SYF9 63 aa7.03□□□□□ -1.28
NME3-204ENST00000563498 KRTAP19-3Q7Z4W3 81 aa7.03□□□□□ -1.28
NME3-204ENST00000563498 SPATA8Q6RVD6 105 aa7□□□□□ -1.29
NME3-204ENST00000563498 MT1EP04732 61 aa6.99□□□□□ -1.29
NME3-204ENST00000563498 ACYP2P14621 99 aa6.99□□□□□ -1.29
NME3-204ENST00000563498 LCE1DQ5T752 114 aa6.93□□□□□ -1.3
NME3-204ENST00000563498 H3BS24 57 aa6.91□□□□□ -1.3
NME3-204ENST00000563498 CAMK2N1Q7Z7J9 78 aa6.91□□□□□ -1.3
NME3-204ENST00000563498 PRAC1Q96KF2 57 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 118.8 ms