RNA–Protein interactions for RNA: ENST00000561878.1

TMEM170A-202, Transcript of transmembrane protein 170A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM170A, Length 1,072 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM170A-202ENST00000561878 HIST1H4AP62805 103 aaKnown RBP10.38□□□□□ -0.75
TMEM170A-202ENST00000561878 A0A087WVE0 104 aa10.37□□□□□ -0.75
TMEM170A-202ENST00000561878 UQCRQO14949 82 aa10.37□□□□□ -0.75
TMEM170A-202ENST00000561878 ATOX1O00244 68 aa10.36□□□□□ -0.75
TMEM170A-202ENST00000561878 KRTAP10-5P60370 271 aa10.36□□□□□ -0.75
TMEM170A-202ENST00000561878 IMUPQ9GZP8 106 aa10.35□□□□□ -0.75
TMEM170A-202ENST00000561878 H0Y9P7 68 aa10.33□□□□□ -0.76
TMEM170A-202ENST00000561878 NDUFC1O43677 76 aa10.31□□□□□ -0.76
TMEM170A-202ENST00000561878 H0YAA0 97 aa10.25□□□□□ -0.77
TMEM170A-202ENST00000561878 A8MUN3 132 aa10.23□□□□□ -0.77
TMEM170A-202ENST00000561878 LINC00643Q86TS7 51 aa10.18□□□□□ -0.78
TMEM170A-202ENST00000561878 LINC00208Q96KT6 92 aa10.15□□□□□ -0.78
TMEM170A-202ENST00000561878 NEBP20929 6669 aa10.13□□□□□ -0.79
TMEM170A-202ENST00000561878 ADM2Q7Z4H4 148 aa10.11□□□□□ -0.79
TMEM170A-202ENST00000561878 MP68P56378 58 aa10.1□□□□□ -0.79
TMEM170A-202ENST00000561878 MUC12Q9UKN1 5478 aa10.09□□□□□ -0.79
TMEM170A-202ENST00000561878 KRTAP5-9P26371 169 aa10.06□□□□□ -0.8
TMEM170A-202ENST00000561878 OCR1Q9BZK8 76 aa10.04□□□□□ -0.8
TMEM170A-202ENST00000561878 PRO2289Q9P1D8 64 aa9.98□□□□□ -0.81
TMEM170A-202ENST00000561878 H3BPC8 53 aa9.94□□□□□ -0.82
TMEM170A-202ENST00000561878 KRTAP20-1Q3LI63 56 aa9.92□□□□□ -0.82
TMEM170A-202ENST00000561878 C20orf197Q8N268 126 aa9.92□□□□□ -0.82
TMEM170A-202ENST00000561878 PLAC4Q8WY50 150 aa9.92□□□□□ -0.82
TMEM170A-202ENST00000561878 R4GN34 69 aa9.91□□□□□ -0.82
TMEM170A-202ENST00000561878 KMT2DO14686 5537 aa9.87□□□□□ -0.83
TMEM170A-202ENST00000561878 A0A1B0GV90 55 aa9.86□□□□□ -0.83
TMEM170A-202ENST00000561878 DMAC1Q96GE9 116 aa9.85□□□□□ -0.83
TMEM170A-202ENST00000561878 J3QR89 54 aa9.84□□□□□ -0.83
TMEM170A-202ENST00000561878 MT1XP80297 61 aa9.84□□□□□ -0.83
TMEM170A-202ENST00000561878 P0C880 135 aa9.83□□□□□ -0.84
TMEM170A-202ENST00000561878 SCGB1A1P11684 91 aa9.82□□□□□ -0.84
TMEM170A-202ENST00000561878 M0QZ58 72 aa9.8□□□□□ -0.84
TMEM170A-202ENST00000561878 MDN1Q9NU22 5596 aa9.8□□□□□ -0.84
TMEM170A-202ENST00000561878 SPRR2FQ96RM1 72 aa9.75□□□□□ -0.85
TMEM170A-202ENST00000561878 KRTAP3-2Q9BYR7 98 aa9.69□□□□□ -0.86
TMEM170A-202ENST00000561878 KRTAP12-2P59991 146 aa9.68□□□□□ -0.86
TMEM170A-202ENST00000561878 TRAV7A0A075B6U4 112 aa9.67□□□□□ -0.86
TMEM170A-202ENST00000561878 KRTAP8-1Q8IUC2 63 aa9.67□□□□□ -0.86
TMEM170A-202ENST00000561878 LINC01554Q52M75 96 aa9.66□□□□□ -0.86
TMEM170A-202ENST00000561878 SPRR2EP22531 72 aa9.64□□□□□ -0.87
TMEM170A-202ENST00000561878 SPRR2BP35325 72 aa9.64□□□□□ -0.87
TMEM170A-202ENST00000561878 SPRR2AP35326 72 aa9.64□□□□□ -0.87
TMEM170A-202ENST00000561878 KRTAP2-3P0C7H8 128 aa9.62□□□□□ -0.87
TMEM170A-202ENST00000561878 KRTAP2-4Q9BYR9 128 aa9.62□□□□□ -0.87
TMEM170A-202ENST00000561878 ACYP2P14621 99 aa9.61□□□□□ -0.87
TMEM170A-202ENST00000561878 SPTSSBQ8NFR3 76 aa9.57□□□□□ -0.88
TMEM170A-202ENST00000561878 SMIM20Q8N5G0 67 aa9.53□□□□□ -0.88
TMEM170A-202ENST00000561878 MT-ATP8P03928 68 aa9.48□□□□□ -0.89
TMEM170A-202ENST00000561878 LCE1AQ5T7P2 110 aa9.47□□□□□ -0.89
TMEM170A-202ENST00000561878 KRTAP4-8A0A0G2JLE6 195 aa9.45□□□□□ -0.9
TMEM170A-202ENST00000561878 CHKB-CPT1BH3BT56 60 aa9.45□□□□□ -0.9
TMEM170A-202ENST00000561878 KRTAP4-8Q9BYQ9 185 aa9.45□□□□□ -0.9
TMEM170A-202ENST00000561878 KRTAP10-7P60409 375 aaPredicted RBP9.39□□□□□ -0.91
TMEM170A-202ENST00000561878 KRTAP10-12P60413 245 aa9.36□□□□□ -0.91
TMEM170A-202ENST00000561878 K7ERU9 68 aa9.35□□□□□ -0.91
TMEM170A-202ENST00000561878 SPRR2DP22532 72 aa9.33□□□□□ -0.92
TMEM170A-202ENST00000561878 KRTAP2-2Q9BYT5 123 aa9.31□□□□□ -0.92
TMEM170A-202ENST00000561878 KRTAP2-1Q9BYU5 128 aa9.31□□□□□ -0.92
TMEM170A-202ENST00000561878 SNURFQ9Y675 71 aa9.3□□□□□ -0.92
TMEM170A-202ENST00000561878 SPANXA2-OT1Q8N9U9 137 aa9.24□□□□□ -0.93
TMEM170A-202ENST00000561878 SERP2Q8N6R1 65 aa9.1□□□□□ -0.95
TMEM170A-202ENST00000561878 KRTAP13-4Q3LI77 160 aa9.09□□□□□ -0.95
TMEM170A-202ENST00000561878 CAMK2N1Q7Z7J9 78 aa9.09□□□□□ -0.95
TMEM170A-202ENST00000561878 LCE3BQ5TA77 95 aa9.08□□□□□ -0.96
TMEM170A-202ENST00000561878 COA5Q86WW8 74 aa8.98□□□□□ -0.97
TMEM170A-202ENST00000561878 SEC61GP60059 68 aa8.96□□□□□ -0.98
TMEM170A-202ENST00000561878 SERP1Q9Y6X1 66 aa8.93□□□□□ -0.98
TMEM170A-202ENST00000561878 A0A0D9SG42 100 aa8.85□□□□□ -0.99
TMEM170A-202ENST00000561878 KRTAP19-7Q3SYF9 63 aa8.79□□□□□ -1
TMEM170A-202ENST00000561878 SPATA8Q6RVD6 105 aa8.78□□□□□ -1
TMEM170A-202ENST00000561878 COX7CP15954 63 aa8.77□□□□□ -1.01
TMEM170A-202ENST00000561878 A0A1B0GU33 70 aa8.76□□□□□ -1.01
TMEM170A-202ENST00000561878 LCE5AQ5TCM9 118 aa8.75□□□□□ -1.01
TMEM170A-202ENST00000561878 SPINT4Q6UDR6 99 aa8.75□□□□□ -1.01
TMEM170A-202ENST00000561878 MT1EP04732 61 aa8.74□□□□□ -1.01
TMEM170A-202ENST00000561878 KRTAP19-3Q7Z4W3 81 aa8.72□□□□□ -1.01
TMEM170A-202ENST00000561878 H7BZZ5 65 aa8.66□□□□□ -1.02
TMEM170A-202ENST00000561878 KRTAP12-1P59990 96 aa8.65□□□□□ -1.02
TMEM170A-202ENST00000561878 CYSTM1Q9H1C7 97 aa8.59□□□□□ -1.03
TMEM170A-202ENST00000561878 DSTQ03001 7570 aaKnown RBP8.59□□□□□ -1.03
TMEM170A-202ENST00000561878 A0A1B0GU69 56 aa8.56□□□□□ -1.04
TMEM170A-202ENST00000561878 SMIM26A0A096LP01 95 aa8.55□□□□□ -1.04
TMEM170A-202ENST00000561878 KRTAP19-5Q3LI72 72 aa8.54□□□□□ -1.04
TMEM170A-202ENST00000561878 MT1GP13640 62 aa8.51□□□□□ -1.05
TMEM170A-202ENST00000561878 PP632Q6XCG6 107 aa8.48□□□□□ -1.05
TMEM170A-202ENST00000561878 KRTAP4-9Q9BYQ8 210 aa8.44□□□□□ -1.06
TMEM170A-202ENST00000561878 A8MU10 97 aa8.41□□□□□ -1.06
TMEM170A-202ENST00000561878 ANAPC13Q9BS18 74 aa8.36□□□□□ -1.07
TMEM170A-202ENST00000561878 TNP1P09430 55 aa8.34□□□□□ -1.07
TMEM170A-202ENST00000561878 MT1MQ8N339 61 aa8.34□□□□□ -1.07
TMEM170A-202ENST00000561878 MT1LQ93083 61 aa8.33□□□□□ -1.08
TMEM170A-202ENST00000561878 LCE3AQ5TA76 89 aa8.29□□□□□ -1.08
TMEM170A-202ENST00000561878 GPR98Q8WXG9 6306 aa8.29□□□□□ -1.08
TMEM170A-202ENST00000561878 PRR15LQ9BU68 103 aa8.28□□□□□ -1.08
TMEM170A-202ENST00000561878 C10orf95Q9H7T3 257 aa8.28□□□□□ -1.08
TMEM170A-202ENST00000561878 LCE1DQ5T752 114 aa8.26□□□□□ -1.09
TMEM170A-202ENST00000561878 LCE4AQ5TA78 99 aa8.25□□□□□ -1.09
TMEM170A-202ENST00000561878 ATP5EP56381 51 aaPredicted RBP8.21□□□□□ -1.1
TMEM170A-202ENST00000561878 CCDC179H3BU77 68 aa8.16□□□□□ -1.1
TMEM170A-202ENST00000561878 MT4P47944 62 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms