RNA–Protein interactions for RNA: ENST00000561662.1

COMMD4-204, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 482 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-204ENST00000561662 KRTAP20-1Q3LI63 56 aa8.78□□□□□ -1
COMMD4-204ENST00000561662 IGKV2D-30A0A075B6S6 120 aa8.77□□□□□ -1.01
COMMD4-204ENST00000561662 MP68P56378 58 aa8.76□□□□□ -1.01
COMMD4-204ENST00000561662 C7orf65Q6ZTY9 151 aa8.76□□□□□ -1.01
COMMD4-204ENST00000561662 LOC101927531A0A1B0GV80 90 aa8.75□□□□□ -1.01
COMMD4-204ENST00000561662 H3BPC8 53 aa8.75□□□□□ -1.01
COMMD4-204ENST00000561662 CYP4F30PQ9H0H9 118 aa8.75□□□□□ -1.01
COMMD4-204ENST00000561662 C1orf64Q8NEQ6 169 aa8.74□□□□□ -1.01
COMMD4-204ENST00000561662 LINC00208Q96KT6 92 aa8.74□□□□□ -1.01
COMMD4-204ENST00000561662 COX7CP15954 63 aa8.69□□□□□ -1.02
COMMD4-204ENST00000561662 ANAPC13Q9BS18 74 aa8.67□□□□□ -1.02
COMMD4-204ENST00000561662 KLKP1Q107X0 134 aa8.65□□□□□ -1.02
COMMD4-204ENST00000561662 C20orf197Q8N268 126 aa8.63□□□□□ -1.03
COMMD4-204ENST00000561662 SNURFQ9Y675 71 aa8.61□□□□□ -1.03
COMMD4-204ENST00000561662 C4orf26Q17RF5 130 aa8.59□□□□□ -1.03
COMMD4-204ENST00000561662 KRTAP3-1Q9BYR8 98 aa8.56□□□□□ -1.04
COMMD4-204ENST00000561662 CCDC179H3BU77 68 aa8.53□□□□□ -1.04
COMMD4-204ENST00000561662 CYSTM1Q9H1C7 97 aa8.53□□□□□ -1.04
COMMD4-204ENST00000561662 MDN1Q9NU22 5596 aa8.49□□□□□ -1.05
COMMD4-204ENST00000561662 A6NN06 94 aa8.49□□□□□ -1.05
COMMD4-204ENST00000561662 H7BZZ5 65 aa8.45□□□□□ -1.06
COMMD4-204ENST00000561662 KMT2DO14686 5537 aa8.45□□□□□ -1.06
COMMD4-204ENST00000561662 NDUFC1O43677 76 aa8.44□□□□□ -1.06
COMMD4-204ENST00000561662 H1FX-AS1Q4G0G2 97 aa8.44□□□□□ -1.06
COMMD4-204ENST00000561662 SPANXA2-OT1Q8N9U9 137 aa8.42□□□□□ -1.06
COMMD4-204ENST00000561662 DMAC1Q96GE9 116 aa8.41□□□□□ -1.06
COMMD4-204ENST00000561662 A8MUN3 132 aa8.4□□□□□ -1.06
COMMD4-204ENST00000561662 KRTAP5-9P26371 169 aa8.37□□□□□ -1.07
COMMD4-204ENST00000561662 PCP4P48539 62 aa8.34□□□□□ -1.07
COMMD4-204ENST00000561662 KRTAP2-3P0C7H8 128 aa8.33□□□□□ -1.08
COMMD4-204ENST00000561662 KRTAP2-4Q9BYR9 128 aa8.33□□□□□ -1.08
COMMD4-204ENST00000561662 MT1BP07438 61 aa8.32□□□□□ -1.08
COMMD4-204ENST00000561662 KRTAP3-3Q9BYR6 98 aa8.28□□□□□ -1.08
COMMD4-204ENST00000561662 ACYP2P14621 99 aa8.27□□□□□ -1.09
COMMD4-204ENST00000561662 LCA10Q71F78 164 aa8.27□□□□□ -1.09
COMMD4-204ENST00000561662 S4R3F8 94 aa8.27□□□□□ -1.09
COMMD4-204ENST00000561662 KRTAP10-5P60370 271 aa8.24□□□□□ -1.09
COMMD4-204ENST00000561662 Q5VV11 94 aa8.24□□□□□ -1.09
COMMD4-204ENST00000561662 TMEM258P61165 79 aa8.21□□□□□ -1.1
COMMD4-204ENST00000561662 ATP5EP56381 51 aaPredicted RBP8.18□□□□□ -1.1
COMMD4-204ENST00000561662 KRTAP19-8Q3LI54 63 aa8.14□□□□□ -1.11
COMMD4-204ENST00000561662 COA5Q86WW8 74 aa8.14□□□□□ -1.11
COMMD4-204ENST00000561662 CSAG1Q6PB30 78 aa8.13□□□□□ -1.11
COMMD4-204ENST00000561662 SPRR2EP22531 72 aa8.11□□□□□ -1.11
COMMD4-204ENST00000561662 SPRR2BP35325 72 aa8.11□□□□□ -1.11
COMMD4-204ENST00000561662 SPRR2AP35326 72 aa8.11□□□□□ -1.11
COMMD4-204ENST00000561662 CHKB-CPT1BH3BT56 60 aa8.07□□□□□ -1.12
COMMD4-204ENST00000561662 SPRR2FQ96RM1 72 aa8.07□□□□□ -1.12
COMMD4-204ENST00000561662 SPRR2GQ9BYE4 73 aa8.07□□□□□ -1.12
COMMD4-204ENST00000561662 KRTAP2-2Q9BYT5 123 aa8.02□□□□□ -1.13
COMMD4-204ENST00000561662 KRTAP2-1Q9BYU5 128 aa8.02□□□□□ -1.13
COMMD4-204ENST00000561662 SPTSSBQ8NFR3 76 aa8□□□□□ -1.13
COMMD4-204ENST00000561662 H0YAA0 97 aa7.98□□□□□ -1.13
COMMD4-204ENST00000561662 SERP1Q9Y6X1 66 aa7.96□□□□□ -1.14
COMMD4-204ENST00000561662 KRTAP3-2Q9BYR7 98 aa7.91□□□□□ -1.14
COMMD4-204ENST00000561662 LCE1AQ5T7P2 110 aa7.88□□□□□ -1.15
COMMD4-204ENST00000561662 ADM2Q7Z4H4 148 aa7.87□□□□□ -1.15
COMMD4-204ENST00000561662 SPRR2DP22532 72 aa7.84□□□□□ -1.15
COMMD4-204ENST00000561662 RPS28P62857 69 aaKnown RBP7.83□□□□□ -1.16
COMMD4-204ENST00000561662 P0C880 135 aa7.82□□□□□ -1.16
COMMD4-204ENST00000561662 KRTAP8-1Q8IUC2 63 aa7.8□□□□□ -1.16
COMMD4-204ENST00000561662 LINC01558Q9Y6Z2 57 aa7.74□□□□□ -1.17
COMMD4-204ENST00000561662 CRIPTQ9P021 101 aa7.72□□□□□ -1.17
COMMD4-204ENST00000561662 GPR98Q8WXG9 6306 aa7.71□□□□□ -1.17
COMMD4-204ENST00000561662 SMIM26A0A096LP01 95 aa7.7□□□□□ -1.18
COMMD4-204ENST00000561662 SEC61GP60059 68 aa7.68□□□□□ -1.18
COMMD4-204ENST00000561662 LCE3BQ5TA77 95 aa7.67□□□□□ -1.18
COMMD4-204ENST00000561662 A0A1B0GU69 56 aa7.66□□□□□ -1.18
COMMD4-204ENST00000561662 Q1T7F1 81 aa7.66□□□□□ -1.18
COMMD4-204ENST00000561662 MT1XP80297 61 aa7.64□□□□□ -1.19
COMMD4-204ENST00000561662 PRO2289Q9P1D8 64 aa7.61□□□□□ -1.19
COMMD4-204ENST00000561662 KRTAP4-8A0A0G2JLE6 195 aa7.6□□□□□ -1.19
COMMD4-204ENST00000561662 KRTAP4-8Q9BYQ9 185 aa7.6□□□□□ -1.19
COMMD4-204ENST00000561662 V9GYY9 64 aa7.6□□□□□ -1.19
COMMD4-204ENST00000561662 PRR15LQ9BU68 103 aa7.58□□□□□ -1.2
COMMD4-204ENST00000561662 R4GN34 69 aa7.58□□□□□ -1.2
COMMD4-204ENST00000561662 A0A1B0GU33 70 aa7.57□□□□□ -1.2
COMMD4-204ENST00000561662 M0QZ58 72 aa7.57□□□□□ -1.2
COMMD4-204ENST00000561662 KRTAP13-4Q3LI77 160 aa7.57□□□□□ -1.2
COMMD4-204ENST00000561662 PSPHP1O15172 72 aa7.49□□□□□ -1.21
COMMD4-204ENST00000561662 KRTAP12-2P59991 146 aa7.49□□□□□ -1.21
COMMD4-204ENST00000561662 SPATA8Q6RVD6 105 aa7.46□□□□□ -1.22
COMMD4-204ENST00000561662 PLAC4Q8WY50 150 aa7.42□□□□□ -1.22
COMMD4-204ENST00000561662 KRTAP4-9Q9BYQ8 210 aa7.4□□□□□ -1.22
COMMD4-204ENST00000561662 LINC01554Q52M75 96 aa7.39□□□□□ -1.23
COMMD4-204ENST00000561662 UQCR11O14957 56 aa7.38□□□□□ -1.23
COMMD4-204ENST00000561662 DSTQ03001 7570 aaKnown RBP7.34□□□□□ -1.23
COMMD4-204ENST00000561662 A8MU10 97 aa7.32□□□□□ -1.24
COMMD4-204ENST00000561662 KRTAP10-7P60409 375 aaPredicted RBP7.32□□□□□ -1.24
COMMD4-204ENST00000561662 A0A0D9SG42 100 aa7.31□□□□□ -1.24
COMMD4-204ENST00000561662 MIR22HGQ0VDD5 57 aa7.27□□□□□ -1.25
COMMD4-204ENST00000561662 KRTAP12-1P59990 96 aa7.26□□□□□ -1.25
COMMD4-204ENST00000561662 A6NED7 52 aa7.24□□□□□ -1.25
COMMD4-204ENST00000561662 KRTAP10-12P60413 245 aa7.2□□□□□ -1.26
COMMD4-204ENST00000561662 SPINT4Q6UDR6 99 aa7.15□□□□□ -1.26
COMMD4-204ENST00000561662 CDC42SE1Q9NRR8 79 aa7.11□□□□□ -1.27
COMMD4-204ENST00000561662 LCE1DQ5T752 114 aa7.08□□□□□ -1.28
COMMD4-204ENST00000561662 CAMK2N1Q7Z7J9 78 aa7.04□□□□□ -1.28
COMMD4-204ENST00000561662 HMCN1Q96RW7 5635 aa6.99□□□□□ -1.29
COMMD4-204ENST00000561662 LCE5AQ5TCM9 118 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 129.9 ms