RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-222ENST00000561431 COX7B2Q8TF08 81 aa2.18□□□□□ -2.06
LRRC28-222ENST00000561431 HERC1Q15751 4861 aa2.18□□□□□ -2.06
LRRC28-222ENST00000561431 DMBT1Q9UGM3 2413 aaPredicted RBP2.18□□□□□ -2.06
LRRC28-222ENST00000561431 A0A096LNI7 61 aa2.17□□□□□ -2.06
LRRC28-222ENST00000561431 F8VRH5 84 aa2.17□□□□□ -2.06
LRRC28-222ENST00000561431 HRES1P13985 223 aa2.17□□□□□ -2.06
LRRC28-222ENST00000561431 LINC00846Q9NV44 126 aa2.17□□□□□ -2.06
LRRC28-222ENST00000561431 LINC01558Q9Y6Z2 57 aa2.17□□□□□ -2.06
LRRC28-222ENST00000561431 IGKV3D-7A0A0C4DH55 119 aa2.16□□□□□ -2.06
LRRC28-222ENST00000561431 JMJD7-PLA2G4BH0Y9G9 81 aa2.16□□□□□ -2.06
LRRC28-222ENST00000561431 RPL37AP61513 92 aaKnown RBP2.16□□□□□ -2.06
LRRC28-222ENST00000561431 COX6A2Q02221 97 aa2.16□□□□□ -2.06
LRRC28-222ENST00000561431 TPRXLQ17RH7 258 aa2.16□□□□□ -2.06
LRRC28-222ENST00000561431 SNURFQ9Y675 71 aa2.16□□□□□ -2.06
LRRC28-222ENST00000561431 A0A087WVE0 104 aa2.15□□□□□ -2.07
LRRC28-222ENST00000561431 IGKV2-24A0A0C4DH68 120 aa2.15□□□□□ -2.07
LRRC28-222ENST00000561431 LINC01549A6NIU2 74 aa2.15□□□□□ -2.07
LRRC28-222ENST00000561431 UQCR11O14957 56 aa2.15□□□□□ -2.07
LRRC28-222ENST00000561431 FLG2Q5D862 2391 aaPredicted RBP2.15□□□□□ -2.07
LRRC28-222ENST00000561431 LRP1Q07954 4544 aaKnown RBP2.14□□□□□ -2.07
LRRC28-222ENST00000561431 TRBV30A0A0K0K1B3 111 aa2.14□□□□□ -2.07
LRRC28-222ENST00000561431 A0A1W2PNN7 141 aa2.14□□□□□ -2.07
LRRC28-222ENST00000561431 LINC01546A6NGU7 62 aa2.14□□□□□ -2.07
LRRC28-222ENST00000561431 IGIPA6NJ69 53 aa2.14□□□□□ -2.07
LRRC28-222ENST00000561431 K7EMI3 77 aa2.14□□□□□ -2.07
LRRC28-222ENST00000561431 MT1HL1P0DM35 61 aa2.14□□□□□ -2.07
LRRC28-222ENST00000561431 MUC19Q7Z5P9 8384 aa2.13□□□□□ -2.07
LRRC28-222ENST00000561431 A0A0G2JQZ4 141 aa2.13□□□□□ -2.07
LRRC28-222ENST00000561431 DNAL4O96015 105 aa2.13□□□□□ -2.07
LRRC28-222ENST00000561431 SPRR4Q96PI1 79 aa2.13□□□□□ -2.07
LRRC28-222ENST00000561431 LCE3DQ9BYE3 92 aa2.13□□□□□ -2.07
LRRC28-222ENST00000561431 C6orf48Q9UBA6 75 aa2.13□□□□□ -2.07
LRRC28-222ENST00000561431 PKHD1L1Q86WI1 4243 aa2.12□□□□□ -2.07
LRRC28-222ENST00000561431 NDUFB1O75438 58 aa2.12□□□□□ -2.07
LRRC28-222ENST00000561431 UNQ6190/PRO20217Q6UXQ8 127 aa2.12□□□□□ -2.07
LRRC28-222ENST00000561431 CDKN2A-AS1Q9UH64 79 aa2.12□□□□□ -2.07
LRRC28-222ENST00000561431 FAT3Q8TDW7 4589 aa2.11□□□□□ -2.07
LRRC28-222ENST00000561431 HMCN2Q8NDA2 5059 aa2.11□□□□□ -2.07
LRRC28-222ENST00000561431 SPRR5A0A1B0GTR4 108 aa2.11□□□□□ -2.07
LRRC28-222ENST00000561431 NDUFA1O15239 70 aa2.11□□□□□ -2.07
LRRC28-222ENST00000561431 KRTAP13-2Q52LG2 175 aa2.11□□□□□ -2.07
LRRC28-222ENST00000561431 Q8IZM0 81 aa2.11□□□□□ -2.07
LRRC28-222ENST00000561431 H0Y9P7 68 aa2.1□□□□□ -2.07
LRRC28-222ENST00000561431 COX17Q14061 63 aa2.1□□□□□ -2.07
LRRC28-222ENST00000561431 NREPQ16612 68 aa2.1□□□□□ -2.07
LRRC28-222ENST00000561431 SPATA8Q6RVD6 105 aa2.09□□□□□ -2.07
LRRC28-222ENST00000561431 SPINK6Q6UWN8 80 aa2.09□□□□□ -2.07
LRRC28-222ENST00000561431 PP632Q6XCG6 107 aa2.09□□□□□ -2.07
LRRC28-222ENST00000561431 LINC00208Q96KT6 92 aa2.09□□□□□ -2.07
LRRC28-222ENST00000561431 TOMM7Q9P0U1 55 aa2.09□□□□□ -2.07
LRRC28-222ENST00000561431 LOC110117498A0A087WWA1 95 aa2.08□□□□□ -2.08
LRRC28-222ENST00000561431 IGKV4-1P06312 121 aa2.08□□□□□ -2.08
LRRC28-222ENST00000561431 ZCCHC13Q8WW36 166 aaKnown RBP2.08□□□□□ -2.08
LRRC28-222ENST00000561431 UBR4Q5T4S7 5183 aa2.07□□□□□ -2.08
LRRC28-222ENST00000561431 INE1O15225 51 aa2.07□□□□□ -2.08
LRRC28-222ENST00000561431 SPINK7P58062 85 aa2.07□□□□□ -2.08
LRRC28-222ENST00000561431 OBSCN-AS1Q96MR7 158 aa2.07□□□□□ -2.08
LRRC28-222ENST00000561431 KRTAP13-1Q8IUC0 172 aa2.06□□□□□ -2.08
LRRC28-222ENST00000561431 ZNF625Q96I27 306 aaPredicted RBP2.06□□□□□ -2.08
LRRC28-222ENST00000561431 TNXBP22105 4242 aa2.06□□□□□ -2.08
LRRC28-222ENST00000561431 LINC00304Q8N9R0 145 aa2.05□□□□□ -2.08
LRRC28-222ENST00000561431 Q96NJ1 140 aa2.05□□□□□ -2.08
LRRC28-222ENST00000561431 LINC00472Q9H8W2 130 aa2.05□□□□□ -2.08
LRRC28-222ENST00000561431 KRTAP10-10P60014 251 aa2.04□□□□□ -2.08
LRRC28-222ENST00000561431 IGLV6-57P01721 117 aa2.03□□□□□ -2.08
LRRC28-222ENST00000561431 KRTAP5-7Q6L8G8 165 aa2.03□□□□□ -2.08
LRRC28-222ENST00000561431 UBL5Q9BZL1 73 aa2.03□□□□□ -2.08
LRRC28-222ENST00000561431 LRP2P98164 4655 aa2.02□□□□□ -2.09
LRRC28-222ENST00000561431 PLNP26678 52 aa2.02□□□□□ -2.09
LRRC28-222ENST00000561431 PRLHP81277 87 aa2.02□□□□□ -2.09
LRRC28-222ENST00000561431 SPRR1AP35321 89 aa2.01□□□□□ -2.09
LRRC28-222ENST00000561431 LINC00158P58513 81 aa2.01□□□□□ -2.09
LRRC28-222ENST00000561431 NCR3O14931 201 aa2□□□□□ -2.09
LRRC28-222ENST00000561431 KCNQ1DNQ9H478 68 aa2□□□□□ -2.09
LRRC28-222ENST00000561431 RNF213Q63HN8 5207 aa1.99□□□□□ -2.09
LRRC28-222ENST00000561431 LPAP08519 4548 aa1.98□□□□□ -2.09
LRRC28-222ENST00000561431 ACYP2P14621 99 aa1.98□□□□□ -2.09
LRRC28-222ENST00000561431 COA5Q86WW8 74 aa1.98□□□□□ -2.09
LRRC28-222ENST00000561431 Q6ZRX8 168 aa1.97□□□□□ -2.09
LRRC28-222ENST00000561431 LINC00308Q8TCZ7 52 aa1.97□□□□□ -2.09
LRRC28-222ENST00000561431 ETDCA0A1B0GVM5 59 aa1.96□□□□□ -2.1
LRRC28-222ENST00000561431 Q6ZQY7 126 aa1.96□□□□□ -2.1
LRRC28-222ENST00000561431 A0A1B0GU69 56 aa1.95□□□□□ -2.1
LRRC28-222ENST00000561431 SPRR1BP22528 89 aa1.94□□□□□ -2.1
LRRC28-222ENST00000561431 COX7BP24311 80 aa1.94□□□□□ -2.1
LRRC28-222ENST00000561431 MUC2Q02817 5179 aa1.93□□□□□ -2.1
LRRC28-222ENST00000561431 SPINK1P00995 79 aa1.93□□□□□ -2.1
LRRC28-222ENST00000561431 RPS29P62273 56 aaKnown RBP1.93□□□□□ -2.1
LRRC28-222ENST00000561431 SSBP3-AS1Q7Z2R9 100 aa1.92□□□□□ -2.1
LRRC28-222ENST00000561431 IGLV5-48A0A075B6I7 105 aa1.91□□□□□ -2.1
LRRC28-222ENST00000561431 SMIM11BQ8TCY0 68 aa1.91□□□□□ -2.1
LRRC28-222ENST00000561431 KRTAP4-1Q9BYQ7 146 aa1.9□□□□□ -2.11
LRRC28-222ENST00000561431 LINC00575Q6W349 94 aa1.89□□□□□ -2.11
LRRC28-222ENST00000561431 DEFB105AQ8NG35 78 aa1.89□□□□□ -2.11
LRRC28-222ENST00000561431 PLAC4Q8WY50 150 aa1.89□□□□□ -2.11
LRRC28-222ENST00000561431 MUC17Q685J3 4493 aa1.89□□□□□ -2.11
LRRC28-222ENST00000561431 FAT4Q6V0I7 4981 aa1.86□□□□□ -2.11
LRRC28-222ENST00000561431 H0YGX0 51 aa1.86□□□□□ -2.11
LRRC28-222ENST00000561431 KRTAP19-2Q3LHN2 52 aa1.86□□□□□ -2.11
LRRC28-222ENST00000561431 C9orf92A6NGG3 77 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms