RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 LINC00208Q96KT6 92 aa3.86□□□□□ -1.79
SPG11-224ENST00000561268 LOC101927531A0A1B0GV80 90 aa3.84□□□□□ -1.79
SPG11-224ENST00000561268 A0A1B0GVX0 72 aa3.84□□□□□ -1.79
SPG11-224ENST00000561268 C8orf17Q9NRJ1 99 aa3.84□□□□□ -1.79
SPG11-224ENST00000561268 FAT4Q6V0I7 4981 aa3.84□□□□□ -1.8
SPG11-224ENST00000561268 C8orf87E5RJ46 101 aa3.83□□□□□ -1.8
SPG11-224ENST00000561268 NDUFS5O43920 106 aa3.82□□□□□ -1.8
SPG11-224ENST00000561268 MPLKIPQ8TAP9 179 aa3.82□□□□□ -1.8
SPG11-224ENST00000561268 MRPL34Q9BQ48 92 aaKnown RBP3.82□□□□□ -1.8
SPG11-224ENST00000561268 IGLV9-49A0A0B4J1Y8 123 aa3.81□□□□□ -1.8
SPG11-224ENST00000561268 Q8N9P0 234 aaPredicted RBP3.81□□□□□ -1.8
SPG11-224ENST00000561268 KRTAP4-1Q9BYQ7 146 aa3.81□□□□□ -1.8
SPG11-224ENST00000561268 RBM12B-AS1Q9P1G2 102 aa3.81□□□□□ -1.8
SPG11-224ENST00000561268 DEFB116Q30KQ4 102 aa3.8□□□□□ -1.8
SPG11-224ENST00000561268 Q75L30 129 aa3.8□□□□□ -1.8
SPG11-224ENST00000561268 KTN1-AS1Q86SY8 53 aa3.79□□□□□ -1.8
SPG11-224ENST00000561268 A0A0G2JQZ4 141 aa3.78□□□□□ -1.8
SPG11-224ENST00000561268 Q5VV11 94 aa3.78□□□□□ -1.8
SPG11-224ENST00000561268 COA5Q86WW8 74 aa3.78□□□□□ -1.8
SPG11-224ENST00000561268 LINC01558Q9Y6Z2 57 aa3.78□□□□□ -1.8
SPG11-224ENST00000561268 SEC61BP60468 96 aaKnown RBP3.77□□□□□ -1.81
SPG11-224ENST00000561268 KRTAP19-2Q3LHN2 52 aa3.77□□□□□ -1.81
SPG11-224ENST00000561268 ATP11AUNQ6ZP68 121 aa3.76□□□□□ -1.81
SPG11-224ENST00000561268 IGHV6-1A0A0B4J1U7 121 aa3.74□□□□□ -1.81
SPG11-224ENST00000561268 A8MUN3 132 aa3.73□□□□□ -1.81
SPG11-224ENST00000561268 ACYP2P14621 99 aa3.73□□□□□ -1.81
SPG11-224ENST00000561268 CDC42SE1Q9NRR8 79 aa3.73□□□□□ -1.81
SPG11-224ENST00000561268 A0A0A0MQY5 61 aa3.72□□□□□ -1.81
SPG11-224ENST00000561268 PSPHP1O15172 72 aa3.72□□□□□ -1.81
SPG11-224ENST00000561268 LCA10Q71F78 164 aa3.72□□□□□ -1.81
SPG11-224ENST00000561268 DMAC1Q96GE9 116 aa3.72□□□□□ -1.81
SPG11-224ENST00000561268 CHKB-CPT1BH3BT56 60 aa3.71□□□□□ -1.82
SPG11-224ENST00000561268 HRES1P13985 223 aa3.71□□□□□ -1.82
SPG11-224ENST00000561268 LINC00313P59037 77 aa3.7□□□□□ -1.82
SPG11-224ENST00000561268 PRR15LQ9BU68 103 aa3.7□□□□□ -1.82
SPG11-224ENST00000561268 RPL37P61927 97 aaKnown RBP3.68□□□□□ -1.82
SPG11-224ENST00000561268 A6NED7 52 aa3.67□□□□□ -1.82
SPG11-224ENST00000561268 C9orf92A6NGG3 77 aa3.67□□□□□ -1.82
SPG11-224ENST00000561268 IGKV2-30P06310 120 aa3.67□□□□□ -1.82
SPG11-224ENST00000561268 MT1HP80294 61 aa3.67□□□□□ -1.82
SPG11-224ENST00000561268 PCOTHQ58A44 107 aa3.67□□□□□ -1.82
SPG11-224ENST00000561268 Q5W150 140 aa3.66□□□□□ -1.82
SPG11-224ENST00000561268 KRTAP16-1A8MUX0 517 aa3.65□□□□□ -1.83
SPG11-224ENST00000561268 NOTCH2NLQ7Z3S9 236 aa3.65□□□□□ -1.83
SPG11-224ENST00000561268 FLGP20930 4061 aaPredicted RBP3.65□□□□□ -1.83
SPG11-224ENST00000561268 C7orf65Q6ZTY9 151 aa3.64□□□□□ -1.83
SPG11-224ENST00000561268 A6NN06 94 aa3.63□□□□□ -1.83
SPG11-224ENST00000561268 IGKV2D-30A0A075B6S6 120 aa3.6□□□□□ -1.83
SPG11-224ENST00000561268 KRTAP10-6P60371 365 aaPredicted RBP3.6□□□□□ -1.83
SPG11-224ENST00000561268 SPATA8Q6RVD6 105 aa3.6□□□□□ -1.83
SPG11-224ENST00000561268 SPTSSBQ8NFR3 76 aa3.59□□□□□ -1.83
SPG11-224ENST00000561268 C20orf166-AS1Q96NR2 134 aa3.59□□□□□ -1.83
SPG11-224ENST00000561268 A0A1B0GU69 56 aa3.58□□□□□ -1.84
SPG11-224ENST00000561268 UQCR11O14957 56 aa3.58□□□□□ -1.84
SPG11-224ENST00000561268 LINC01554Q52M75 96 aa3.58□□□□□ -1.84
SPG11-224ENST00000561268 A8MUU9 505 aa3.57□□□□□ -1.84
SPG11-224ENST00000561268 SPINK7P58062 85 aa3.56□□□□□ -1.84
SPG11-224ENST00000561268 KRTAP15-1Q3LI76 137 aa3.56□□□□□ -1.84
SPG11-224ENST00000561268 CRCT1Q9UGL9 99 aa3.56□□□□□ -1.84
SPG11-224ENST00000561268 A8MU10 97 aa3.52□□□□□ -1.85
SPG11-224ENST00000561268 MIR22HGQ0VDD5 57 aa3.51□□□□□ -1.85
SPG11-224ENST00000561268 COX6B2Q6YFQ2 88 aa3.51□□□□□ -1.85
SPG11-224ENST00000561268 M0R2T5 61 aa3.47□□□□□ -1.85
SPG11-224ENST00000561268 FSIP2Q5CZC0 6907 aa3.45□□□□□ -1.86
SPG11-224ENST00000561268 MT2AP02795 61 aa3.41□□□□□ -1.86
SPG11-224ENST00000561268 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.4□□□□□ -1.87
SPG11-224ENST00000561268 MT1FP04733 61 aa3.39□□□□□ -1.87
SPG11-224ENST00000561268 A0A1B0GU33 70 aa3.38□□□□□ -1.87
SPG11-224ENST00000561268 H1FX-AS1Q4G0G2 97 aa3.37□□□□□ -1.87
SPG11-224ENST00000561268 K7ERS5 55 aa3.36□□□□□ -1.87
SPG11-224ENST00000561268 H0YAA0 97 aa3.35□□□□□ -1.87
SPG11-224ENST00000561268 USH2AO75445 5202 aa3.33□□□□□ -1.88
SPG11-224ENST00000561268 KRTAP5-11Q6L8G4 156 aa3.32□□□□□ -1.88
SPG11-224ENST00000561268 SSPOA2VEC9 5147 aa3.32□□□□□ -1.88
SPG11-224ENST00000561268 KRTAP10-7P60409 375 aaPredicted RBP3.31□□□□□ -1.88
SPG11-224ENST00000561268 ROMO1P60602 79 aa3.3□□□□□ -1.88
SPG11-224ENST00000561268 KRTAP10-10P60014 251 aa3.29□□□□□ -1.88
SPG11-224ENST00000561268 PRAC1Q96KF2 57 aa3.29□□□□□ -1.88
SPG11-224ENST00000561268 KRTAP25-1Q3LHN0 102 aa3.28□□□□□ -1.88
SPG11-224ENST00000561268 KRTAP19-6Q3LI70 58 aa3.28□□□□□ -1.88
SPG11-224ENST00000561268 FCGBPQ9Y6R7 5405 aaPredicted RBP3.27□□□□□ -1.89
SPG11-224ENST00000561268 CSAG1Q6PB30 78 aa3.26□□□□□ -1.89
SPG11-224ENST00000561268 ADM2Q7Z4H4 148 aa3.26□□□□□ -1.89
SPG11-224ENST00000561268 KRTAP23-1A1A580 65 aa3.25□□□□□ -1.89
SPG11-224ENST00000561268 S4R3F8 94 aa3.24□□□□□ -1.89
SPG11-224ENST00000561268 M0QZ58 72 aa3.22□□□□□ -1.89
SPG11-224ENST00000561268 LUZP6Q538Z0 58 aa3.19□□□□□ -1.9
SPG11-224ENST00000561268 MACF1Q9UPN3 7388 aaKnown RBP3.18□□□□□ -1.9
SPG11-224ENST00000561268 LCE1AQ5T7P2 110 aa3.16□□□□□ -1.9
SPG11-224ENST00000561268 CAMK2N1Q7Z7J9 78 aa3.14□□□□□ -1.91
SPG11-224ENST00000561268 MT1BP07438 61 aa3.13□□□□□ -1.91
SPG11-224ENST00000561268 P0C880 135 aa3.13□□□□□ -1.91
SPG11-224ENST00000561268 KRTAP19-8Q3LI54 63 aa3.13□□□□□ -1.91
SPG11-224ENST00000561268 KRTAP13-4Q3LI77 160 aa3.13□□□□□ -1.91
SPG11-224ENST00000561268 SPRR2GQ9BYE4 73 aa3.13□□□□□ -1.91
SPG11-224ENST00000561268 KRTAP6-3Q3LI67 103 aa3.12□□□□□ -1.91
SPG11-224ENST00000561268 CRIPTQ9P021 101 aa3.1□□□□□ -1.91
SPG11-224ENST00000561268 KRTAP12-1P59990 96 aa3.09□□□□□ -1.91
SPG11-224ENST00000561268 KRTAP12-2P59991 146 aa3.06□□□□□ -1.92
SPG11-224ENST00000561268 KRTAP10-5P60370 271 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 667.9 ms