RNA–Protein interactions for RNA: ENST00000560825.5

GABPB1-210, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-210ENST00000560825 S4R3F8 94 aa5.03□□□□□ -1.6
GABPB1-210ENST00000560825 KRTAP6-3Q3LI67 103 aa5.02□□□□□ -1.61
GABPB1-210ENST00000560825 FAM236AA0A1B0GUQ0 79 aa5□□□□□ -1.61
GABPB1-210ENST00000560825 FAM236BA0A1B0GV22 79 aa5□□□□□ -1.61
GABPB1-210ENST00000560825 ETDBQ3ZM63 59 aa5□□□□□ -1.61
GABPB1-210ENST00000560825 KRTAP19-8Q3LI54 63 aa4.99□□□□□ -1.61
GABPB1-210ENST00000560825 SPRR2GQ9BYE4 73 aa4.99□□□□□ -1.61
GABPB1-210ENST00000560825 MUC12Q9UKN1 5478 aa4.96□□□□□ -1.62
GABPB1-210ENST00000560825 PCP4L1A6NKN8 68 aa4.96□□□□□ -1.62
GABPB1-210ENST00000560825 CSAG1Q6PB30 78 aa4.96□□□□□ -1.62
GABPB1-210ENST00000560825 CYP4F30PQ9H0H9 118 aa4.96□□□□□ -1.62
GABPB1-210ENST00000560825 A6NN06 94 aa4.94□□□□□ -1.62
GABPB1-210ENST00000560825 Q5VV11 94 aa4.94□□□□□ -1.62
GABPB1-210ENST00000560825 F8W1H4 67 aa4.93□□□□□ -1.62
GABPB1-210ENST00000560825 TP53AIP1Q9HCN2 124 aa4.93□□□□□ -1.62
GABPB1-210ENST00000560825 KRTAP10-5P60370 271 aa4.92□□□□□ -1.62
GABPB1-210ENST00000560825 KLKP1Q107X0 134 aa4.92□□□□□ -1.62
GABPB1-210ENST00000560825 GTF2H5Q6ZYL4 71 aa4.92□□□□□ -1.62
GABPB1-210ENST00000560825 KRTAP23-1A1A580 65 aa4.89□□□□□ -1.63
GABPB1-210ENST00000560825 TRAV22A0A0B4J277 110 aa4.88□□□□□ -1.63
GABPB1-210ENST00000560825 NEBP20929 6669 aa4.86□□□□□ -1.63
GABPB1-210ENST00000560825 KMT2DO14686 5537 aa4.85□□□□□ -1.63
GABPB1-210ENST00000560825 KRTAP15-1Q3LI76 137 aa4.85□□□□□ -1.63
GABPB1-210ENST00000560825 LOC101927531A0A1B0GV80 90 aa4.82□□□□□ -1.64
GABPB1-210ENST00000560825 H0Y9P7 68 aa4.81□□□□□ -1.64
GABPB1-210ENST00000560825 HIST1H4AP62805 103 aaKnown RBP4.81□□□□□ -1.64
GABPB1-210ENST00000560825 MDN1Q9NU22 5596 aa4.81□□□□□ -1.64
GABPB1-210ENST00000560825 KRTAP5-9P26371 169 aa4.8□□□□□ -1.64
GABPB1-210ENST00000560825 A0A0A0MQY5 61 aa4.78□□□□□ -1.64
GABPB1-210ENST00000560825 FAM240AA0A1B0GVK7 77 aa4.77□□□□□ -1.65
GABPB1-210ENST00000560825 UQCRQO14949 82 aa4.77□□□□□ -1.65
GABPB1-210ENST00000560825 ACYP1P07311 99 aa4.77□□□□□ -1.65
GABPB1-210ENST00000560825 ADM2Q7Z4H4 148 aa4.76□□□□□ -1.65
GABPB1-210ENST00000560825 ATP5EP2Q5VTU8 51 aa4.75□□□□□ -1.65
GABPB1-210ENST00000560825 CRIPTQ9P021 101 aa4.75□□□□□ -1.65
GABPB1-210ENST00000560825 H0YAA0 97 aa4.74□□□□□ -1.65
GABPB1-210ENST00000560825 LINC00208Q96KT6 92 aa4.74□□□□□ -1.65
GABPB1-210ENST00000560825 NDUFC1O43677 76 aa4.73□□□□□ -1.65
GABPB1-210ENST00000560825 MT1XP80297 61 aa4.73□□□□□ -1.65
GABPB1-210ENST00000560825 IMUPQ9GZP8 106 aa4.73□□□□□ -1.65
GABPB1-210ENST00000560825 OCR1Q9BZK8 76 aa4.72□□□□□ -1.65
GABPB1-210ENST00000560825 ATOX1O00244 68 aa4.71□□□□□ -1.66
GABPB1-210ENST00000560825 A0A1B0GV90 55 aa4.7□□□□□ -1.66
GABPB1-210ENST00000560825 P0C880 135 aa4.7□□□□□ -1.66
GABPB1-210ENST00000560825 KRTAP20-1Q3LI63 56 aa4.7□□□□□ -1.66
GABPB1-210ENST00000560825 LINC00643Q86TS7 51 aa4.7□□□□□ -1.66
GABPB1-210ENST00000560825 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.69□□□□□ -1.66
GABPB1-210ENST00000560825 A8MUN3 132 aa4.66□□□□□ -1.66
GABPB1-210ENST00000560825 SEC61GP60059 68 aa4.66□□□□□ -1.66
GABPB1-210ENST00000560825 SPRR2FQ96RM1 72 aa4.63□□□□□ -1.67
GABPB1-210ENST00000560825 MP68P56378 58 aa4.6□□□□□ -1.67
GABPB1-210ENST00000560825 DMAC1Q96GE9 116 aa4.59□□□□□ -1.67
GABPB1-210ENST00000560825 M0QZ58 72 aa4.58□□□□□ -1.68
GABPB1-210ENST00000560825 SPRR2EP22531 72 aa4.57□□□□□ -1.68
GABPB1-210ENST00000560825 SPRR2BP35325 72 aa4.57□□□□□ -1.68
GABPB1-210ENST00000560825 SPRR2AP35326 72 aa4.57□□□□□ -1.68
GABPB1-210ENST00000560825 R4GN34 69 aa4.57□□□□□ -1.68
GABPB1-210ENST00000560825 PLAC4Q8WY50 150 aa4.56□□□□□ -1.68
GABPB1-210ENST00000560825 KRTAP10-7P60409 375 aaPredicted RBP4.55□□□□□ -1.68
GABPB1-210ENST00000560825 KRTAP8-1Q8IUC2 63 aa4.55□□□□□ -1.68
GABPB1-210ENST00000560825 PRO2289Q9P1D8 64 aa4.55□□□□□ -1.68
GABPB1-210ENST00000560825 KRTAP12-2P59991 146 aa4.55□□□□□ -1.68
GABPB1-210ENST00000560825 LCE1AQ5T7P2 110 aa4.55□□□□□ -1.68
GABPB1-210ENST00000560825 KRTAP2-3P0C7H8 128 aa4.54□□□□□ -1.68
GABPB1-210ENST00000560825 LINC01554Q52M75 96 aa4.54□□□□□ -1.68
GABPB1-210ENST00000560825 KRTAP2-4Q9BYR9 128 aa4.54□□□□□ -1.68
GABPB1-210ENST00000560825 H3BPC8 53 aa4.5□□□□□ -1.69
GABPB1-210ENST00000560825 MT-ATP8P03928 68 aa4.47□□□□□ -1.69
GABPB1-210ENST00000560825 SCGB1A1P11684 91 aa4.47□□□□□ -1.69
GABPB1-210ENST00000560825 KRTAP5-11Q6L8G4 156 aa4.46□□□□□ -1.69
GABPB1-210ENST00000560825 KRTAP10-12P60413 245 aa4.46□□□□□ -1.7
GABPB1-210ENST00000560825 C20orf197Q8N268 126 aa4.45□□□□□ -1.7
GABPB1-210ENST00000560825 TRAV7A0A075B6U4 112 aa4.43□□□□□ -1.7
GABPB1-210ENST00000560825 J3QR89 54 aa4.41□□□□□ -1.7
GABPB1-210ENST00000560825 SPRR2DP22532 72 aa4.41□□□□□ -1.7
GABPB1-210ENST00000560825 KRTAP13-4Q3LI77 160 aa4.4□□□□□ -1.7
GABPB1-210ENST00000560825 ACYP2P14621 99 aa4.39□□□□□ -1.71
GABPB1-210ENST00000560825 KRTAP2-2Q9BYT5 123 aa4.38□□□□□ -1.71
GABPB1-210ENST00000560825 KRTAP2-1Q9BYU5 128 aa4.38□□□□□ -1.71
GABPB1-210ENST00000560825 SNURFQ9Y675 71 aa4.38□□□□□ -1.71
GABPB1-210ENST00000560825 CHKB-CPT1BH3BT56 60 aa4.29□□□□□ -1.72
GABPB1-210ENST00000560825 V9GYY9 64 aa4.29□□□□□ -1.72
GABPB1-210ENST00000560825 SMIM20Q8N5G0 67 aa4.28□□□□□ -1.72
GABPB1-210ENST00000560825 SPTSSBQ8NFR3 76 aa4.28□□□□□ -1.72
GABPB1-210ENST00000560825 DSTQ03001 7570 aaKnown RBP4.26□□□□□ -1.73
GABPB1-210ENST00000560825 K7ERU9 68 aa4.26□□□□□ -1.73
GABPB1-210ENST00000560825 KRTAP19-7Q3SYF9 63 aa4.25□□□□□ -1.73
GABPB1-210ENST00000560825 SPANXA2-OT1Q8N9U9 137 aa4.23□□□□□ -1.73
GABPB1-210ENST00000560825 SERP2Q8N6R1 65 aa4.2□□□□□ -1.74
GABPB1-210ENST00000560825 COA5Q86WW8 74 aa4.19□□□□□ -1.74
GABPB1-210ENST00000560825 CYSTM1Q9H1C7 97 aa4.19□□□□□ -1.74
GABPB1-210ENST00000560825 MT1EP04732 61 aa4.18□□□□□ -1.74
GABPB1-210ENST00000560825 SPATA8Q6RVD6 105 aa4.18□□□□□ -1.74
GABPB1-210ENST00000560825 CAMK2N1Q7Z7J9 78 aa4.18□□□□□ -1.74
GABPB1-210ENST00000560825 A0A0D9SG42 100 aa4.17□□□□□ -1.74
GABPB1-210ENST00000560825 LCE1EQ5T753 118 aa4.15□□□□□ -1.74
GABPB1-210ENST00000560825 KRTAP19-3Q7Z4W3 81 aa4.12□□□□□ -1.75
GABPB1-210ENST00000560825 KRTAP12-1P59990 96 aa4.11□□□□□ -1.75
GABPB1-210ENST00000560825 KRTAP19-5Q3LI72 72 aa4.1□□□□□ -1.75
GABPB1-210ENST00000560825 SPINT4Q6UDR6 99 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms