RNA–Protein interactions for RNA: ENST00000560236.1

LRRC28-218, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-218ENST00000560236 SEC61GP60059 68 aa1.31□□□□□ -2.2
LRRC28-218ENST00000560236 C9orf153Q5TBE3 101 aa1.31□□□□□ -2.2
LRRC28-218ENST00000560236 Q8IZM0 81 aa1.31□□□□□ -2.2
LRRC28-218ENST00000560236 MIR7-3HGQ8N6C7 128 aa1.31□□□□□ -2.2
LRRC28-218ENST00000560236 SND1-IT1Q9HBX3 110 aa1.31□□□□□ -2.2
LRRC28-218ENST00000560236 JMJD7-PLA2G4BH0Y9G9 81 aa1.3□□□□□ -2.2
LRRC28-218ENST00000560236 M0R378 163 aa1.3□□□□□ -2.2
LRRC28-218ENST00000560236 NPC2P61916 151 aa1.3□□□□□ -2.2
LRRC28-218ENST00000560236 COX17Q14061 63 aa1.3□□□□□ -2.2
LRRC28-218ENST00000560236 C6orf226Q5I0X4 101 aa1.3□□□□□ -2.2
LRRC28-218ENST00000560236 S100A7L2Q5SY68 101 aa1.3□□□□□ -2.2
LRRC28-218ENST00000560236 Q5XG85 94 aa1.3□□□□□ -2.2
LRRC28-218ENST00000560236 Q8NDZ9 215 aa1.3□□□□□ -2.2
LRRC28-218ENST00000560236 RBM12B-AS1Q9P1G2 102 aa1.3□□□□□ -2.2
LRRC28-218ENST00000560236 TRAV7A0A075B6U4 112 aa1.29□□□□□ -2.2
LRRC28-218ENST00000560236 A0A087WVE0 104 aa1.29□□□□□ -2.2
LRRC28-218ENST00000560236 TRBV7-6A0A0J9YX20 115 aa1.29□□□□□ -2.2
LRRC28-218ENST00000560236 TRBV7-4A0A0J9YYF1 115 aa1.29□□□□□ -2.2
LRRC28-218ENST00000560236 hADV29S1A0JD25 119 aa1.29□□□□□ -2.2
LRRC28-218ENST00000560236 H3BQ85 93 aa1.29□□□□□ -2.2
LRRC28-218ENST00000560236 H7BZZ5 65 aa1.29□□□□□ -2.2
LRRC28-218ENST00000560236 TMEM256-PLSCR3K7ERE1 68 aa1.29□□□□□ -2.2
LRRC28-218ENST00000560236 NCR3O14931 201 aa1.29□□□□□ -2.2
LRRC28-218ENST00000560236 ERC2-IT1O76042 136 aa1.29□□□□□ -2.2
LRRC28-218ENST00000560236 DNAL4O96015 105 aa1.29□□□□□ -2.2
LRRC28-218ENST00000560236 CD164Q04900 197 aa1.29□□□□□ -2.2
LRRC28-218ENST00000560236 KLKP1Q107X0 134 aa1.29□□□□□ -2.2
LRRC28-218ENST00000560236 LINC00575Q6W349 94 aa1.29□□□□□ -2.2
LRRC28-218ENST00000560236 Q6ZQT0 140 aa1.29□□□□□ -2.2
LRRC28-218ENST00000560236 C14orf132Q9NPU4 83 aa1.29□□□□□ -2.2
LRRC28-218ENST00000560236 ORMDL1Q9P0S3 153 aa1.29□□□□□ -2.2
LRRC28-218ENST00000560236 IGKV3D-7A0A0C4DH55 119 aa1.28□□□□□ -2.2
LRRC28-218ENST00000560236 PDE6GP18545 87 aa1.28□□□□□ -2.2
LRRC28-218ENST00000560236 LINC00158P58513 81 aa1.28□□□□□ -2.2
LRRC28-218ENST00000560236 KRTAP5-10Q6L8G5 202 aa1.28□□□□□ -2.2
LRRC28-218ENST00000560236 ZCCHC13Q8WW36 166 aaKnown RBP1.28□□□□□ -2.2
LRRC28-218ENST00000560236 DSCR8Q96T75 97 aa1.28□□□□□ -2.2
LRRC28-218ENST00000560236 SERP1Q9Y6X1 66 aa1.28□□□□□ -2.2
LRRC28-218ENST00000560236 DSTQ03001 7570 aaKnown RBP1.27□□□□□ -2.21
LRRC28-218ENST00000560236 A0A0G2JQZ4 141 aa1.27□□□□□ -2.21
LRRC28-218ENST00000560236 BPY2O14599 106 aa1.27□□□□□ -2.21
LRRC28-218ENST00000560236 ELOF1P60002 83 aaKnown RBP1.27□□□□□ -2.21
LRRC28-218ENST00000560236 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.27□□□□□ -2.21
LRRC28-218ENST00000560236 OR13C6PQ8NH95 151 aa1.27□□□□□ -2.21
LRRC28-218ENST00000560236 TOMM7Q9P0U1 55 aa1.27□□□□□ -2.21
LRRC28-218ENST00000560236 IGLV5-48A0A075B6I7 105 aa1.26□□□□□ -2.21
LRRC28-218ENST00000560236 TRAV23DV6A0A075B6W5 121 aa1.26□□□□□ -2.21
LRRC28-218ENST00000560236 SMIM26A0A096LP01 95 aa1.26□□□□□ -2.21
LRRC28-218ENST00000560236 A0A1B0GW54 56 aa1.26□□□□□ -2.21
LRRC28-218ENST00000560236 NDUFC1O43677 76 aa1.26□□□□□ -2.21
LRRC28-218ENST00000560236 PFN2P35080 140 aa1.26□□□□□ -2.21
LRRC28-218ENST00000560236 SPRR1AP35321 89 aa1.26□□□□□ -2.21
LRRC28-218ENST00000560236 ATP5EP56381 51 aaPredicted RBP1.26□□□□□ -2.21
LRRC28-218ENST00000560236 RBM3P98179 157 aaKnown RBP1.26□□□□□ -2.21
LRRC28-218ENST00000560236 C4orf26Q17RF5 130 aa1.26□□□□□ -2.21
LRRC28-218ENST00000560236 C1orf195Q5TG92 126 aa1.26□□□□□ -2.21
LRRC28-218ENST00000560236 UBL5Q9BZL1 73 aa1.26□□□□□ -2.21
LRRC28-218ENST00000560236 ETDCA0A1B0GVM5 59 aa1.25□□□□□ -2.21
LRRC28-218ENST00000560236 COX7BP24311 80 aa1.25□□□□□ -2.21
LRRC28-218ENST00000560236 Q5VV11 94 aa1.25□□□□□ -2.21
LRRC28-218ENST00000560236 Q6ZQY7 126 aa1.25□□□□□ -2.21
LRRC28-218ENST00000560236 C20orf197Q8N268 126 aa1.25□□□□□ -2.21
LRRC28-218ENST00000560236 KCNQ1DNQ9H478 68 aa1.25□□□□□ -2.21
LRRC28-218ENST00000560236 ZNF73O43830 326 aaPredicted RBP1.24□□□□□ -2.21
LRRC28-218ENST00000560236 P0C880 135 aa1.24□□□□□ -2.21
LRRC28-218ENST00000560236 NREPQ16612 68 aa1.24□□□□□ -2.21
LRRC28-218ENST00000560236 HRCT1Q6UXD1 115 aa1.24□□□□□ -2.21
LRRC28-218ENST00000560236 KRTAP8-1Q8IUC2 63 aa1.24□□□□□ -2.21
LRRC28-218ENST00000560236 ST20-AS1Q8NBB2 130 aa1.24□□□□□ -2.21
LRRC28-218ENST00000560236 TMEM254Q8TBM7 123 aa1.24□□□□□ -2.21
LRRC28-218ENST00000560236 C8orf17Q9NRJ1 99 aa1.24□□□□□ -2.21
LRRC28-218ENST00000560236 PRO0628Q9UI54 55 aa1.24□□□□□ -2.21
LRRC28-218ENST00000560236 A0A1W2PNM2 257 aa1.23□□□□□ -2.21
LRRC28-218ENST00000560236 hDV103S1A0JD37 113 aa1.23□□□□□ -2.21
LRRC28-218ENST00000560236 F8WEM9 126 aa1.23□□□□□ -2.21
LRRC28-218ENST00000560236 MT1BP07438 61 aa1.23□□□□□ -2.21
LRRC28-218ENST00000560236 KRTAP13-4Q3LI77 160 aa1.23□□□□□ -2.21
LRRC28-218ENST00000560236 SPANXA2-OT1Q8N9U9 137 aa1.23□□□□□ -2.21
LRRC28-218ENST00000560236 CYP4F30PQ9H0H9 118 aa1.23□□□□□ -2.21
LRRC28-218ENST00000560236 LAMTOR3Q9UHA4 124 aa1.23□□□□□ -2.21
LRRC28-218ENST00000560236 AHNAK2Q8IVF2 5795 aa1.23□□□□□ -2.21
LRRC28-218ENST00000560236 HRES1P13985 223 aa1.22□□□□□ -2.21
LRRC28-218ENST00000560236 SPRR1BP22528 89 aa1.22□□□□□ -2.21
LRRC28-218ENST00000560236 Q1T7F1 81 aa1.22□□□□□ -2.21
LRRC28-218ENST00000560236 Q6ZRX8 168 aa1.22□□□□□ -2.21
LRRC28-218ENST00000560236 Q9BRP9 147 aa1.22□□□□□ -2.21
LRRC28-218ENST00000560236 SNURFQ9Y675 71 aa1.22□□□□□ -2.21
LRRC28-218ENST00000560236 KRTAP19-8Q3LI54 63 aa1.21□□□□□ -2.22
LRRC28-218ENST00000560236 Q96NJ1 140 aa1.21□□□□□ -2.22
LRRC28-218ENST00000560236 PRR15Q8IV56 129 aa1.2□□□□□ -2.22
LRRC28-218ENST00000560236 C1orf64Q8NEQ6 169 aa1.2□□□□□ -2.22
LRRC28-218ENST00000560236 TRAV22A0A0B4J277 110 aa1.19□□□□□ -2.22
LRRC28-218ENST00000560236 HCG22E2RYF7 251 aa1.19□□□□□ -2.22
LRRC28-218ENST00000560236 H3BPC8 53 aa1.19□□□□□ -2.22
LRRC28-218ENST00000560236 K7EQZ3 153 aa1.19□□□□□ -2.22
LRRC28-218ENST00000560236 LOC101927531A0A1B0GV80 90 aa1.18□□□□□ -2.22
LRRC28-218ENST00000560236 NDUFB1O75438 58 aa1.18□□□□□ -2.22
LRRC28-218ENST00000560236 SPRR2GQ9BYE4 73 aa1.18□□□□□ -2.22
LRRC28-218ENST00000560236 LINC00472Q9H8W2 130 aa1.18□□□□□ -2.22
LRRC28-218ENST00000560236 PRO2289Q9P1D8 64 aa1.18□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms