RNA–Protein interactions for RNA: ENST00000559281.5

TPM1-218, Transcript of tropomyosin 1, humanhuman

TSL 5 BASIC

Gene TPM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-218ENST00000559281 UQCRQO14949 82 aa7.93□□□□□ -1.14
TPM1-218ENST00000559281 ATOX1O00244 68 aa7.92□□□□□ -1.14
TPM1-218ENST00000559281 CRIPTQ9P021 101 aa7.91□□□□□ -1.14
TPM1-218ENST00000559281 IMUPQ9GZP8 106 aa7.89□□□□□ -1.15
TPM1-218ENST00000559281 A0A087WVE0 104 aa7.87□□□□□ -1.15
TPM1-218ENST00000559281 H0Y9P7 68 aa7.87□□□□□ -1.15
TPM1-218ENST00000559281 NDUFC1O43677 76 aa7.87□□□□□ -1.15
TPM1-218ENST00000559281 KRTAP10-5P60370 271 aa7.82□□□□□ -1.16
TPM1-218ENST00000559281 LINC00643Q86TS7 51 aa7.81□□□□□ -1.16
TPM1-218ENST00000559281 A8MUN3 132 aa7.8□□□□□ -1.16
TPM1-218ENST00000559281 A0A1B0GV90 55 aa7.79□□□□□ -1.16
TPM1-218ENST00000559281 H0YAA0 97 aa7.79□□□□□ -1.16
TPM1-218ENST00000559281 LINC00208Q96KT6 92 aa7.75□□□□□ -1.17
TPM1-218ENST00000559281 MP68P56378 58 aa7.74□□□□□ -1.17
TPM1-218ENST00000559281 ADM2Q7Z4H4 148 aa7.69□□□□□ -1.18
TPM1-218ENST00000559281 OCR1Q9BZK8 76 aa7.67□□□□□ -1.18
TPM1-218ENST00000559281 H3BPC8 53 aa7.61□□□□□ -1.19
TPM1-218ENST00000559281 NEBP20929 6669 aa7.61□□□□□ -1.19
TPM1-218ENST00000559281 J3QR89 54 aa7.58□□□□□ -1.2
TPM1-218ENST00000559281 KRTAP5-9P26371 169 aa7.58□□□□□ -1.2
TPM1-218ENST00000559281 PRO2289Q9P1D8 64 aa7.58□□□□□ -1.2
TPM1-218ENST00000559281 C20orf197Q8N268 126 aa7.57□□□□□ -1.2
TPM1-218ENST00000559281 PLAC4Q8WY50 150 aa7.56□□□□□ -1.2
TPM1-218ENST00000559281 SCGB1A1P11684 91 aa7.55□□□□□ -1.2
TPM1-218ENST00000559281 R4GN34 69 aa7.54□□□□□ -1.2
TPM1-218ENST00000559281 MUC12Q9UKN1 5478 aa7.51□□□□□ -1.21
TPM1-218ENST00000559281 DMAC1Q96GE9 116 aa7.5□□□□□ -1.21
TPM1-218ENST00000559281 P0C880 135 aa7.46□□□□□ -1.22
TPM1-218ENST00000559281 KRTAP20-1Q3LI63 56 aa7.46□□□□□ -1.22
TPM1-218ENST00000559281 M0QZ58 72 aa7.45□□□□□ -1.22
TPM1-218ENST00000559281 MT1XP80297 61 aa7.44□□□□□ -1.22
TPM1-218ENST00000559281 KMT2DO14686 5537 aa7.42□□□□□ -1.22
TPM1-218ENST00000559281 TRAV7A0A075B6U4 112 aa7.39□□□□□ -1.23
TPM1-218ENST00000559281 ACYP2P14621 99 aa7.37□□□□□ -1.23
TPM1-218ENST00000559281 KRTAP3-2Q9BYR7 98 aa7.37□□□□□ -1.23
TPM1-218ENST00000559281 LINC01554Q52M75 96 aa7.35□□□□□ -1.23
TPM1-218ENST00000559281 SPRR2FQ96RM1 72 aa7.35□□□□□ -1.23
TPM1-218ENST00000559281 MT-ATP8P03928 68 aa7.33□□□□□ -1.24
TPM1-218ENST00000559281 SPTSSBQ8NFR3 76 aa7.33□□□□□ -1.24
TPM1-218ENST00000559281 MDN1Q9NU22 5596 aa7.32□□□□□ -1.24
TPM1-218ENST00000559281 KRTAP12-2P59991 146 aa7.32□□□□□ -1.24
TPM1-218ENST00000559281 SMIM20Q8N5G0 67 aa7.32□□□□□ -1.24
TPM1-218ENST00000559281 KRTAP8-1Q8IUC2 63 aa7.31□□□□□ -1.24
TPM1-218ENST00000559281 SPRR2EP22531 72 aa7.27□□□□□ -1.25
TPM1-218ENST00000559281 SPRR2BP35325 72 aa7.27□□□□□ -1.25
TPM1-218ENST00000559281 SPRR2AP35326 72 aa7.27□□□□□ -1.25
TPM1-218ENST00000559281 KRTAP2-3P0C7H8 128 aa7.26□□□□□ -1.25
TPM1-218ENST00000559281 KRTAP2-4Q9BYR9 128 aa7.26□□□□□ -1.25
TPM1-218ENST00000559281 CHKB-CPT1BH3BT56 60 aa7.23□□□□□ -1.25
TPM1-218ENST00000559281 K7ERU9 68 aa7.23□□□□□ -1.25
TPM1-218ENST00000559281 KRTAP4-8A0A0G2JLE6 195 aa7.14□□□□□ -1.27
TPM1-218ENST00000559281 LCE1AQ5T7P2 110 aa7.14□□□□□ -1.27
TPM1-218ENST00000559281 KRTAP4-8Q9BYQ9 185 aa7.14□□□□□ -1.27
TPM1-218ENST00000559281 SNURFQ9Y675 71 aa7.11□□□□□ -1.27
TPM1-218ENST00000559281 KRTAP10-7P60409 375 aaPredicted RBP7.09□□□□□ -1.27
TPM1-218ENST00000559281 KRTAP10-12P60413 245 aa7.08□□□□□ -1.28
TPM1-218ENST00000559281 SPANXA2-OT1Q8N9U9 137 aa7.07□□□□□ -1.28
TPM1-218ENST00000559281 SPRR2DP22532 72 aa7.03□□□□□ -1.28
TPM1-218ENST00000559281 KRTAP2-2Q9BYT5 123 aa7.03□□□□□ -1.28
TPM1-218ENST00000559281 KRTAP2-1Q9BYU5 128 aa7.03□□□□□ -1.28
TPM1-218ENST00000559281 SERP2Q8N6R1 65 aa6.99□□□□□ -1.29
TPM1-218ENST00000559281 CAMK2N1Q7Z7J9 78 aa6.93□□□□□ -1.3
TPM1-218ENST00000559281 KRTAP13-4Q3LI77 160 aa6.9□□□□□ -1.3
TPM1-218ENST00000559281 SEC61GP60059 68 aa6.88□□□□□ -1.31
TPM1-218ENST00000559281 COA5Q86WW8 74 aa6.86□□□□□ -1.31
TPM1-218ENST00000559281 SERP1Q9Y6X1 66 aa6.85□□□□□ -1.31
TPM1-218ENST00000559281 LCE3BQ5TA77 95 aa6.84□□□□□ -1.31
TPM1-218ENST00000559281 CYSTM1Q9H1C7 97 aa6.77□□□□□ -1.33
TPM1-218ENST00000559281 COX7CP15954 63 aa6.76□□□□□ -1.33
TPM1-218ENST00000559281 A0A0D9SG42 100 aa6.75□□□□□ -1.33
TPM1-218ENST00000559281 A0A1B0GU33 70 aa6.72□□□□□ -1.33
TPM1-218ENST00000559281 H7BZZ5 65 aa6.69□□□□□ -1.34
TPM1-218ENST00000559281 SPATA8Q6RVD6 105 aa6.69□□□□□ -1.34
TPM1-218ENST00000559281 SPINT4Q6UDR6 99 aa6.69□□□□□ -1.34
TPM1-218ENST00000559281 KRTAP19-7Q3SYF9 63 aa6.64□□□□□ -1.35
TPM1-218ENST00000559281 MT1EP04732 61 aa6.61□□□□□ -1.35
TPM1-218ENST00000559281 LCE5AQ5TCM9 118 aa6.61□□□□□ -1.35
TPM1-218ENST00000559281 KRTAP19-3Q7Z4W3 81 aa6.6□□□□□ -1.35
TPM1-218ENST00000559281 KRTAP12-1P59990 96 aa6.58□□□□□ -1.36
TPM1-218ENST00000559281 A0A1B0GU69 56 aa6.56□□□□□ -1.36
TPM1-218ENST00000559281 SMIM26A0A096LP01 95 aa6.55□□□□□ -1.36
TPM1-218ENST00000559281 ANAPC13Q9BS18 74 aa6.51□□□□□ -1.37
TPM1-218ENST00000559281 DSTQ03001 7570 aaKnown RBP6.49□□□□□ -1.37
TPM1-218ENST00000559281 KRTAP19-5Q3LI72 72 aa6.47□□□□□ -1.37
TPM1-218ENST00000559281 CCDC179H3BU77 68 aa6.46□□□□□ -1.38
TPM1-218ENST00000559281 MT1GP13640 62 aa6.46□□□□□ -1.38
TPM1-218ENST00000559281 PP632Q6XCG6 107 aa6.44□□□□□ -1.38
TPM1-218ENST00000559281 A8MU10 97 aa6.41□□□□□ -1.38
TPM1-218ENST00000559281 TNP1P09430 55 aa6.37□□□□□ -1.39
TPM1-218ENST00000559281 PRR15LQ9BU68 103 aa6.36□□□□□ -1.39
TPM1-218ENST00000559281 KRTAP4-9Q9BYQ8 210 aa6.36□□□□□ -1.39
TPM1-218ENST00000559281 ATP5EP56381 51 aaPredicted RBP6.3□□□□□ -1.4
TPM1-218ENST00000559281 MT1LQ93083 61 aa6.3□□□□□ -1.4
TPM1-218ENST00000559281 C10orf95Q9H7T3 257 aa6.3□□□□□ -1.4
TPM1-218ENST00000559281 MT1MQ8N339 61 aa6.29□□□□□ -1.4
TPM1-218ENST00000559281 LCE3AQ5TA76 89 aa6.28□□□□□ -1.4
TPM1-218ENST00000559281 LCE4AQ5TA78 99 aa6.23□□□□□ -1.41
TPM1-218ENST00000559281 LINC01558Q9Y6Z2 57 aa6.22□□□□□ -1.41
TPM1-218ENST00000559281 LCE1DQ5T752 114 aa6.21□□□□□ -1.42
TPM1-218ENST00000559281 GPR98Q8WXG9 6306 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms