RNA–Protein interactions for RNA: ENST00000558376.5

RABGGTA-204, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-204ENST00000558376 C20orf166-AS1Q96NR2 134 aa5.86□□□□□ -1.47
RABGGTA-204ENST00000558376 RPL37P61927 97 aaKnown RBP5.85□□□□□ -1.47
RABGGTA-204ENST00000558376 Q1T7F1 81 aa5.82□□□□□ -1.48
RABGGTA-204ENST00000558376 SPANXA2-OT1Q8N9U9 137 aa5.82□□□□□ -1.48
RABGGTA-204ENST00000558376 SSPOA2VEC9 5147 aa5.81□□□□□ -1.48
RABGGTA-204ENST00000558376 BRK1Q8WUW1 75 aa5.81□□□□□ -1.48
RABGGTA-204ENST00000558376 Q75L30 129 aa5.8□□□□□ -1.48
RABGGTA-204ENST00000558376 USH2AO75445 5202 aa5.79□□□□□ -1.48
RABGGTA-204ENST00000558376 IGKV2D-30A0A075B6S6 120 aa5.79□□□□□ -1.48
RABGGTA-204ENST00000558376 IGKV2-30P06310 120 aa5.79□□□□□ -1.48
RABGGTA-204ENST00000558376 V9GYY9 64 aa5.78□□□□□ -1.48
RABGGTA-204ENST00000558376 ATP11AUNQ6ZP68 121 aa5.76□□□□□ -1.49
RABGGTA-204ENST00000558376 LOC101927531A0A1B0GV80 90 aa5.75□□□□□ -1.49
RABGGTA-204ENST00000558376 KRTAP9-8Q9BYQ0 159 aa5.75□□□□□ -1.49
RABGGTA-204ENST00000558376 FCGBPQ9Y6R7 5405 aaPredicted RBP5.72□□□□□ -1.49
RABGGTA-204ENST00000558376 PSPHP1O15172 72 aa5.71□□□□□ -1.5
RABGGTA-204ENST00000558376 SPINK7P58062 85 aa5.71□□□□□ -1.5
RABGGTA-204ENST00000558376 HRES1P13985 223 aa5.7□□□□□ -1.5
RABGGTA-204ENST00000558376 C7orf65Q6ZTY9 151 aa5.68□□□□□ -1.5
RABGGTA-204ENST00000558376 COA5Q86WW8 74 aa5.67□□□□□ -1.5
RABGGTA-204ENST00000558376 A8MUN3 132 aa5.66□□□□□ -1.5
RABGGTA-204ENST00000558376 KRTAP19-1Q8IUB9 90 aa5.64□□□□□ -1.51
RABGGTA-204ENST00000558376 Q5VV11 94 aa5.64□□□□□ -1.51
RABGGTA-204ENST00000558376 MACF1Q9UPN3 7388 aaKnown RBP5.63□□□□□ -1.51
RABGGTA-204ENST00000558376 LCE2BO14633 110 aa5.62□□□□□ -1.51
RABGGTA-204ENST00000558376 MT2AP02795 61 aa5.62□□□□□ -1.51
RABGGTA-204ENST00000558376 PRR15LQ9BU68 103 aa5.62□□□□□ -1.51
RABGGTA-204ENST00000558376 CHKB-CPT1BH3BT56 60 aa5.61□□□□□ -1.51
RABGGTA-204ENST00000558376 SYNE2Q8WXH0 6885 aaKnown RBP5.61□□□□□ -1.51
RABGGTA-204ENST00000558376 KRTAP3-1Q9BYR8 98 aa5.59□□□□□ -1.51
RABGGTA-204ENST00000558376 MT1FP04733 61 aa5.58□□□□□ -1.52
RABGGTA-204ENST00000558376 KRTAP9-3Q9BYQ3 159 aa5.58□□□□□ -1.52
RABGGTA-204ENST00000558376 LINC01558Q9Y6Z2 57 aa5.56□□□□□ -1.52
RABGGTA-204ENST00000558376 A6NED7 52 aa5.54□□□□□ -1.52
RABGGTA-204ENST00000558376 DMAC1Q96GE9 116 aa5.54□□□□□ -1.52
RABGGTA-204ENST00000558376 ACYP2P14621 99 aa5.53□□□□□ -1.52
RABGGTA-204ENST00000558376 KRTAP10-10P60014 251 aa5.52□□□□□ -1.53
RABGGTA-204ENST00000558376 PMAIP1Q13794 54 aa5.52□□□□□ -1.53
RABGGTA-204ENST00000558376 H3BS24 57 aa5.5□□□□□ -1.53
RABGGTA-204ENST00000558376 A8MU10 97 aa5.49□□□□□ -1.53
RABGGTA-204ENST00000558376 CDC42SE1Q9NRR8 79 aa5.49□□□□□ -1.53
RABGGTA-204ENST00000558376 LCA10Q71F78 164 aa5.47□□□□□ -1.53
RABGGTA-204ENST00000558376 SPTSSBQ8NFR3 76 aa5.47□□□□□ -1.53
RABGGTA-204ENST00000558376 KRTAP19-6Q3LI70 58 aa5.45□□□□□ -1.54
RABGGTA-204ENST00000558376 RBM12B-AS1Q9P1G2 102 aa5.44□□□□□ -1.54
RABGGTA-204ENST00000558376 A0A0A0MQY5 61 aa5.41□□□□□ -1.54
RABGGTA-204ENST00000558376 H1FX-AS1Q4G0G2 97 aa5.4□□□□□ -1.55
RABGGTA-204ENST00000558376 KTN1-AS1Q86SY8 53 aa5.39□□□□□ -1.55
RABGGTA-204ENST00000558376 KRTAP6-3Q3LI67 103 aa5.38□□□□□ -1.55
RABGGTA-204ENST00000558376 KRTAP3-3Q9BYR6 98 aa5.38□□□□□ -1.55
RABGGTA-204ENST00000558376 A0A1B0GU69 56 aa5.37□□□□□ -1.55
RABGGTA-204ENST00000558376 A6NN06 94 aa5.37□□□□□ -1.55
RABGGTA-204ENST00000558376 S4R3F8 94 aa5.35□□□□□ -1.55
RABGGTA-204ENST00000558376 NEBP20929 6669 aa5.34□□□□□ -1.55
RABGGTA-204ENST00000558376 UQCR11O14957 56 aa5.28□□□□□ -1.56
RABGGTA-204ENST00000558376 SPATA8Q6RVD6 105 aa5.28□□□□□ -1.56
RABGGTA-204ENST00000558376 MIR22HGQ0VDD5 57 aa5.26□□□□□ -1.57
RABGGTA-204ENST00000558376 CSAG1Q6PB30 78 aa5.24□□□□□ -1.57
RABGGTA-204ENST00000558376 KRTAP3-2Q9BYR7 98 aa5.17□□□□□ -1.58
RABGGTA-204ENST00000558376 MUC12Q9UKN1 5478 aa5.17□□□□□ -1.58
RABGGTA-204ENST00000558376 ADM2Q7Z4H4 148 aa5.15□□□□□ -1.58
RABGGTA-204ENST00000558376 P0C880 135 aa5.15□□□□□ -1.59
RABGGTA-204ENST00000558376 KRTAP20-1Q3LI63 56 aa5.12□□□□□ -1.59
RABGGTA-204ENST00000558376 PRAC1Q96KF2 57 aa5.09□□□□□ -1.59
RABGGTA-204ENST00000558376 A0A1B0GU33 70 aa5.07□□□□□ -1.6
RABGGTA-204ENST00000558376 H0YAA0 97 aa5.06□□□□□ -1.6
RABGGTA-204ENST00000558376 MT1BP07438 61 aa5.05□□□□□ -1.6
RABGGTA-204ENST00000558376 KRTAP13-4Q3LI77 160 aa5.04□□□□□ -1.6
RABGGTA-204ENST00000558376 KRTAP5-9P26371 169 aa5□□□□□ -1.61
RABGGTA-204ENST00000558376 KMT2DO14686 5537 aa4.99□□□□□ -1.61
RABGGTA-204ENST00000558376 LINC01554Q52M75 96 aa4.98□□□□□ -1.61
RABGGTA-204ENST00000558376 KRTAP10-5P60370 271 aa4.98□□□□□ -1.61
RABGGTA-204ENST00000558376 KRTAP19-8Q3LI54 63 aa4.98□□□□□ -1.61
RABGGTA-204ENST00000558376 MDN1Q9NU22 5596 aa4.98□□□□□ -1.61
RABGGTA-204ENST00000558376 K7ERS5 55 aa4.97□□□□□ -1.61
RABGGTA-204ENST00000558376 A0A0D9SG42 100 aa4.96□□□□□ -1.62
RABGGTA-204ENST00000558376 M0QZ58 72 aa4.95□□□□□ -1.62
RABGGTA-204ENST00000558376 R4GN34 69 aa4.94□□□□□ -1.62
RABGGTA-204ENST00000558376 SPRR2GQ9BYE4 73 aa4.94□□□□□ -1.62
RABGGTA-204ENST00000558376 KRTAP2-3P0C7H8 128 aa4.91□□□□□ -1.62
RABGGTA-204ENST00000558376 KRTAP2-4Q9BYR9 128 aa4.91□□□□□ -1.62
RABGGTA-204ENST00000558376 KRTAP25-1Q3LHN0 102 aa4.86□□□□□ -1.63
RABGGTA-204ENST00000558376 CRIPTQ9P021 101 aa4.86□□□□□ -1.63
RABGGTA-204ENST00000558376 KRTAP12-2P59991 146 aa4.82□□□□□ -1.64
RABGGTA-204ENST00000558376 SPINT4Q6UDR6 99 aa4.82□□□□□ -1.64
RABGGTA-204ENST00000558376 ROMO1P60602 79 aa4.81□□□□□ -1.64
RABGGTA-204ENST00000558376 KRTAP12-1P59990 96 aa4.8□□□□□ -1.64
RABGGTA-204ENST00000558376 SPRR2EP22531 72 aa4.79□□□□□ -1.64
RABGGTA-204ENST00000558376 SPRR2BP35325 72 aa4.79□□□□□ -1.64
RABGGTA-204ENST00000558376 SPRR2AP35326 72 aa4.79□□□□□ -1.64
RABGGTA-204ENST00000558376 SPRR2FQ96RM1 72 aa4.77□□□□□ -1.65
RABGGTA-204ENST00000558376 KRTAP2-2Q9BYT5 123 aa4.73□□□□□ -1.65
RABGGTA-204ENST00000558376 KRTAP2-1Q9BYU5 128 aa4.73□□□□□ -1.65
RABGGTA-204ENST00000558376 LCE1AQ5T7P2 110 aa4.7□□□□□ -1.66
RABGGTA-204ENST00000558376 MT1XP80297 61 aa4.65□□□□□ -1.66
RABGGTA-204ENST00000558376 KRTAP8-1Q8IUC2 63 aa4.65□□□□□ -1.66
RABGGTA-204ENST00000558376 PLAC4Q8WY50 150 aa4.65□□□□□ -1.66
RABGGTA-204ENST00000558376 CAMK2N1Q7Z7J9 78 aa4.63□□□□□ -1.67
RABGGTA-204ENST00000558376 SPRR2DP22532 72 aa4.62□□□□□ -1.67
RABGGTA-204ENST00000558376 PRO2289Q9P1D8 64 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms