RNA–Protein interactions for RNA: ENST00000556534.1

SCFD1-221, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-221ENST00000556534 PKIAP61925 76 aa0.24□□□□□ -2.37
SCFD1-221ENST00000556534 KRTAP19-8Q3LI54 63 aa0.24□□□□□ -2.37
SCFD1-221ENST00000556534 GAFA1Q96PS6 74 aa0.24□□□□□ -2.37
SCFD1-221ENST00000556534 TRBV7-4A0A0J9YYF1 115 aa0.23□□□□□ -2.37
SCFD1-221ENST00000556534 H3BUA1 57 aa0.23□□□□□ -2.37
SCFD1-221ENST00000556534 PMCHL1Q16048 86 aa0.23□□□□□ -2.37
SCFD1-221ENST00000556534 PSMG4Q5JS54 123 aa0.23□□□□□ -2.37
SCFD1-221ENST00000556534 COL5A1-AS1Q5SY13 56 aa0.23□□□□□ -2.37
SCFD1-221ENST00000556534 WFDC10BQ8IUB3 73 aa0.23□□□□□ -2.37
SCFD1-221ENST00000556534 USMG5Q96IX5 58 aa0.23□□□□□ -2.37
SCFD1-221ENST00000556534 TRBV7-7A0A0K0K1E9 115 aa0.22□□□□□ -2.37
SCFD1-221ENST00000556534 SYS1-DBNDD2H3BUS1 97 aa0.22□□□□□ -2.37
SCFD1-221ENST00000556534 DEFB130BP0DP73 79 aa0.22□□□□□ -2.37
SCFD1-221ENST00000556534 DEFB130AP0DP74 79 aa0.22□□□□□ -2.37
SCFD1-221ENST00000556534 MT1GP13640 62 aa0.22□□□□□ -2.37
SCFD1-221ENST00000556534 SPRR1AP35321 89 aa0.22□□□□□ -2.37
SCFD1-221ENST00000556534 LINC01556Q5JQF7 62 aa0.22□□□□□ -2.37
SCFD1-221ENST00000556534 NCBP2-AS2Q69YL0 99 aa0.21□□□□□ -2.38
SCFD1-221ENST00000556534 HEPN1Q6WQI6 88 aa0.21□□□□□ -2.38
SCFD1-221ENST00000556534 LEAP2Q969E1 77 aa0.21□□□□□ -2.38
SCFD1-221ENST00000556534 SPRR2GQ9BYE4 73 aa0.21□□□□□ -2.38
SCFD1-221ENST00000556534 PVALEFA0A1B0GWK0 134 aa0.2□□□□□ -2.38
SCFD1-221ENST00000556534 IFI6P09912 130 aa0.2□□□□□ -2.38
SCFD1-221ENST00000556534 FAUP35544 74 aaKnown RBP0.2□□□□□ -2.38
SCFD1-221ENST00000556534 DEFB131AP59861 70 aa0.2□□□□□ -2.38
SCFD1-221ENST00000556534 MT1XP80297 61 aa0.2□□□□□ -2.38
SCFD1-221ENST00000556534 DEFB107AQ8IZN7 70 aa0.2□□□□□ -2.38
SCFD1-221ENST00000556534 MT1MQ8N339 61 aa0.2□□□□□ -2.38
SCFD1-221ENST00000556534 FXYD6Q9H0Q3 95 aa0.2□□□□□ -2.38
SCFD1-221ENST00000556534 H3BQF6 201 aa0.19□□□□□ -2.38
SCFD1-221ENST00000556534 NDUFA4O00483 81 aa0.19□□□□□ -2.38
SCFD1-221ENST00000556534 NDUFA3O95167 84 aa0.19□□□□□ -2.38
SCFD1-221ENST00000556534 MT1EP04732 61 aa0.19□□□□□ -2.38
SCFD1-221ENST00000556534 APELAP0DMC3 54 aa0.19□□□□□ -2.38
SCFD1-221ENST00000556534 KRTAP19-7Q3SYF9 63 aa0.19□□□□□ -2.38
SCFD1-221ENST00000556534 RPS27LQ71UM5 84 aaKnown RBP0.19□□□□□ -2.38
SCFD1-221ENST00000556534 TIMM8BQ9Y5J9 83 aaPredicted RBP0.19□□□□□ -2.38
SCFD1-221ENST00000556534 A0A1B0GU69 56 aa0.18□□□□□ -2.38
SCFD1-221ENST00000556534 K7EQZ3 153 aa0.18□□□□□ -2.38
SCFD1-221ENST00000556534 DEFA5Q01523 94 aa0.18□□□□□ -2.38
SCFD1-221ENST00000556534 KLK9Q2XQG4 91 aa0.18□□□□□ -2.38
SCFD1-221ENST00000556534 KRTAP6-2Q3LI66 62 aa0.18□□□□□ -2.38
SCFD1-221ENST00000556534 RHPN1-AS1Q9BWJ2 59 aa0.18□□□□□ -2.38
SCFD1-221ENST00000556534 TTTY10Q9BZA0 68 aa0.18□□□□□ -2.38
SCFD1-221ENST00000556534 UBE2D4Q9Y2X8 147 aa0.18□□□□□ -2.38
SCFD1-221ENST00000556534 H0YAA0 97 aa0.17□□□□□ -2.38
SCFD1-221ENST00000556534 ARMS2P0C7Q2 107 aa0.17□□□□□ -2.38
SCFD1-221ENST00000556534 SPRR1BP22528 89 aa0.17□□□□□ -2.38
SCFD1-221ENST00000556534 RPS29P62273 56 aaKnown RBP0.17□□□□□ -2.38
SCFD1-221ENST00000556534 GNGT1P63211 74 aa0.17□□□□□ -2.38
SCFD1-221ENST00000556534 C6orf201Q7Z4U5 140 aa0.17□□□□□ -2.38
SCFD1-221ENST00000556534 NOP10Q9NPE3 64 aaKnown RBP0.17□□□□□ -2.38
SCFD1-221ENST00000556534 A0A096LNI7 61 aa0.16□□□□□ -2.38
SCFD1-221ENST00000556534 H0Y9P7 68 aa0.16□□□□□ -2.38
SCFD1-221ENST00000556534 C9orf92A6NGG3 77 aa0.15□□□□□ -2.39
SCFD1-221ENST00000556534 A8MTW9 85 aa0.15□□□□□ -2.39
SCFD1-221ENST00000556534 HMGN2P05204 90 aaKnown RBP0.15□□□□□ -2.39
SCFD1-221ENST00000556534 PLGLAQ15195 96 aa0.15□□□□□ -2.39
SCFD1-221ENST00000556534 C20orf78Q9BR46 151 aa0.15□□□□□ -2.39
SCFD1-221ENST00000556534 PSENENQ9NZ42 101 aa0.15□□□□□ -2.39
SCFD1-221ENST00000556534 HIGD1BQ9P298 99 aa0.15□□□□□ -2.39
SCFD1-221ENST00000556534 RABAC1Q9UI14 185 aa0.15□□□□□ -2.39
SCFD1-221ENST00000556534 F8WEM9 126 aa0.14□□□□□ -2.39
SCFD1-221ENST00000556534 ETDBQ3ZM63 59 aa0.14□□□□□ -2.39
SCFD1-221ENST00000556534 ENHOQ6UWT2 76 aa0.14□□□□□ -2.39
SCFD1-221ENST00000556534 COX8AP10176 69 aa0.13□□□□□ -2.39
SCFD1-221ENST00000556534 HTN1P15515 57 aa0.13□□□□□ -2.39
SCFD1-221ENST00000556534 TMEM167AQ8TBQ9 72 aa0.13□□□□□ -2.39
SCFD1-221ENST00000556534 MT1LQ93083 61 aa0.13□□□□□ -2.39
SCFD1-221ENST00000556534 SPINK4O60575 86 aa0.12□□□□□ -2.39
SCFD1-221ENST00000556534 LEPROTL1O95214 131 aa0.12□□□□□ -2.39
SCFD1-221ENST00000556534 DEFB1P60022 68 aa0.12□□□□□ -2.39
SCFD1-221ENST00000556534 KRTAP6-1Q3LI64 71 aa0.12□□□□□ -2.39
SCFD1-221ENST00000556534 A0A087WWC5 75 aa0.11□□□□□ -2.39
SCFD1-221ENST00000556534 PRCDQ00LT1 54 aa0.11□□□□□ -2.39
SCFD1-221ENST00000556534 DEFB105AQ8NG35 78 aa0.11□□□□□ -2.39
SCFD1-221ENST00000556534 D6R8Y8 96 aa0.1□□□□□ -2.39
SCFD1-221ENST00000556534 CYB5AP00167 134 aa0.1□□□□□ -2.39
SCFD1-221ENST00000556534 MT1AP04731 61 aa0.1□□□□□ -2.39
SCFD1-221ENST00000556534 HMGN3Q15651 99 aa0.1□□□□□ -2.39
SCFD1-221ENST00000556534 MUSTN1Q8IVN3 82 aa0.1□□□□□ -2.39
SCFD1-221ENST00000556534 CRIPTQ9P021 101 aa0.1□□□□□ -2.39
SCFD1-221ENST00000556534 K7EIM0 57 aa0.09□□□□□ -2.4
SCFD1-221ENST00000556534 SFTA3P0C7M3 94 aa0.09□□□□□ -2.4
SCFD1-221ENST00000556534 RPL39P5Q59GN2 51 aa0.09□□□□□ -2.4
SCFD1-221ENST00000556534 Q9H521 79 aa0.09□□□□□ -2.4
SCFD1-221ENST00000556534 I3L3M4 83 aa0.08□□□□□ -2.4
SCFD1-221ENST00000556534 PRM1P04553 51 aa0.08□□□□□ -2.4
SCFD1-221ENST00000556534 KRTAP19-5Q3LI72 72 aa0.08□□□□□ -2.4
SCFD1-221ENST00000556534 CPSF4LA6NMK7 179 aaKnown RBP0.07□□□□□ -2.4
SCFD1-221ENST00000556534 RPS27P42677 84 aaKnown RBP0.07□□□□□ -2.4
SCFD1-221ENST00000556534 WT1-ASQ06250 92 aa0.06□□□□□ -2.4
SCFD1-221ENST00000556534 PEA15Q15121 130 aa0.06□□□□□ -2.4
SCFD1-221ENST00000556534 ALKAL2Q6UX46 152 aa0.06□□□□□ -2.4
SCFD1-221ENST00000556534 V9GYS6 101 aa0.06□□□□□ -2.4
SCFD1-221ENST00000556534 IGLC2P0DOY2 106 aa0.05□□□□□ -2.4
SCFD1-221ENST00000556534 IGLC3P0DOY3 106 aa0.05□□□□□ -2.4
SCFD1-221ENST00000556534 SMIM11AP58511 58 aa0.05□□□□□ -2.4
SCFD1-221ENST00000556534 CLPSL2Q6UWE3 100 aa0.05□□□□□ -2.4
SCFD1-221ENST00000556534 K7EP34 96 aa0.04□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms