RNA–Protein interactions for RNA: ENST00000555985.5

LINC00648-202, long intergenic non-protein coding RNA 648, humanhuman

TSL 2 BASIC

Gene LINC00648, Length 2,885 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-202ENST00000555985 CASC2Q6XLA1 102 aa2.3□□□□□ -2.04
LINC00648-202ENST00000555985 SPAG11AQ6PDA7 123 aa2.3□□□□□ -2.04
LINC00648-202ENST00000555985 DHRS4-AS1Q9P1J3 65 aa2.3□□□□□ -2.04
LINC00648-202ENST00000555985 RPL37AP8A6NKH3 93 aa2.29□□□□□ -2.04
LINC00648-202ENST00000555985 LRP2P98164 4655 aa2.29□□□□□ -2.04
LINC00648-202ENST00000555985 KRTAP13-2Q52LG2 175 aa2.29□□□□□ -2.04
LINC00648-202ENST00000555985 KRTAP3-1Q9BYR8 98 aa2.29□□□□□ -2.04
LINC00648-202ENST00000555985 A0A087X002 238 aa2.28□□□□□ -2.04
LINC00648-202ENST00000555985 ASB16-AS1Q495Z4 193 aa2.28□□□□□ -2.04
LINC00648-202ENST00000555985 LINC00483Q53H64 154 aa2.28□□□□□ -2.04
LINC00648-202ENST00000555985 Q6ZRX8 168 aa2.28□□□□□ -2.04
LINC00648-202ENST00000555985 ADM2Q7Z4H4 148 aa2.28□□□□□ -2.04
LINC00648-202ENST00000555985 KRTAP23-1A1A580 65 aa2.28□□□□□ -2.04
LINC00648-202ENST00000555985 RNF213Q63HN8 5207 aa2.26□□□□□ -2.05
LINC00648-202ENST00000555985 IGFL1Q6UW32 110 aa2.26□□□□□ -2.05
LINC00648-202ENST00000555985 A0A087WSZ3 146 aa2.26□□□□□ -2.05
LINC00648-202ENST00000555985 A0A0G2JQZ4 141 aa2.26□□□□□ -2.05
LINC00648-202ENST00000555985 HRES1P13985 223 aa2.26□□□□□ -2.05
LINC00648-202ENST00000555985 PRLHP81277 87 aa2.26□□□□□ -2.05
LINC00648-202ENST00000555985 PCOTHQ58A44 107 aa2.26□□□□□ -2.05
LINC00648-202ENST00000555985 NOTCH2NLQ7Z3S9 236 aa2.25□□□□□ -2.05
LINC00648-202ENST00000555985 A8MWP4 228 aa2.25□□□□□ -2.05
LINC00648-202ENST00000555985 IGLV8-61A0A075B6I0 122 aa2.24□□□□□ -2.05
LINC00648-202ENST00000555985 SPRR1BP22528 89 aa2.24□□□□□ -2.05
LINC00648-202ENST00000555985 ANAPC11Q9NYG5 84 aa2.24□□□□□ -2.05
LINC00648-202ENST00000555985 MMP24-AS1A0A0U1RRL7 71 aa2.24□□□□□ -2.05
LINC00648-202ENST00000555985 LINC00472Q9H8W2 130 aa2.24□□□□□ -2.05
LINC00648-202ENST00000555985 RETNLBQ9BQ08 111 aa2.23□□□□□ -2.05
LINC00648-202ENST00000555985 RPS29P62273 56 aaKnown RBP2.23□□□□□ -2.05
LINC00648-202ENST00000555985 TP53AIP1Q9HCN2 124 aa2.23□□□□□ -2.05
LINC00648-202ENST00000555985 SPATA8Q6RVD6 105 aa2.22□□□□□ -2.05
LINC00648-202ENST00000555985 TYMSOSQ8TAI1 123 aa2.22□□□□□ -2.05
LINC00648-202ENST00000555985 ZNF706Q9Y5V0 76 aaPredicted RBP2.22□□□□□ -2.05
LINC00648-202ENST00000555985 CSAG1Q6PB30 78 aa2.22□□□□□ -2.05
LINC00648-202ENST00000555985 LINC00304Q8N9R0 145 aa2.21□□□□□ -2.06
LINC00648-202ENST00000555985 MUC2Q02817 5179 aa2.21□□□□□ -2.06
LINC00648-202ENST00000555985 IGHV6-1A0A0B4J1U7 121 aa2.2□□□□□ -2.06
LINC00648-202ENST00000555985 TPRXLQ17RH7 258 aa2.2□□□□□ -2.06
LINC00648-202ENST00000555985 SSBP3-AS1Q7Z2R9 100 aa2.2□□□□□ -2.06
LINC00648-202ENST00000555985 MIR22HGQ0VDD5 57 aa2.19□□□□□ -2.06
LINC00648-202ENST00000555985 A0A1B0GU69 56 aa2.19□□□□□ -2.06
LINC00648-202ENST00000555985 SPINK1P00995 79 aa2.19□□□□□ -2.06
LINC00648-202ENST00000555985 ACYP2P14621 99 aa2.19□□□□□ -2.06
LINC00648-202ENST00000555985 KRTAP5-9P26371 169 aa2.19□□□□□ -2.06
LINC00648-202ENST00000555985 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.19□□□□□ -2.06
LINC00648-202ENST00000555985 KRTAP13-3Q3SY46 172 aa2.18□□□□□ -2.06
LINC00648-202ENST00000555985 C8orf17Q9NRJ1 99 aa2.18□□□□□ -2.06
LINC00648-202ENST00000555985 UQCR11O14957 56 aa2.18□□□□□ -2.06
LINC00648-202ENST00000555985 Q96NJ1 140 aa2.17□□□□□ -2.06
LINC00648-202ENST00000555985 ROMO1P60602 79 aa2.16□□□□□ -2.06
LINC00648-202ENST00000555985 MRPL34Q9BQ48 92 aaKnown RBP2.16□□□□□ -2.06
LINC00648-202ENST00000555985 A0A1B0GVX0 72 aa2.16□□□□□ -2.06
LINC00648-202ENST00000555985 DMAC1Q96GE9 116 aa2.16□□□□□ -2.06
LINC00648-202ENST00000555985 FAT4Q6V0I7 4981 aa2.15□□□□□ -2.07
LINC00648-202ENST00000555985 KRTAP25-1Q3LHN0 102 aa2.14□□□□□ -2.07
LINC00648-202ENST00000555985 Q5W150 140 aa2.14□□□□□ -2.07
LINC00648-202ENST00000555985 KRTAP4-1Q9BYQ7 146 aa2.14□□□□□ -2.07
LINC00648-202ENST00000555985 FLGP20930 4061 aaPredicted RBP2.13□□□□□ -2.07
LINC00648-202ENST00000555985 KRTAP19-2Q3LHN2 52 aa2.12□□□□□ -2.07
LINC00648-202ENST00000555985 GPR98Q8WXG9 6306 aa2.11□□□□□ -2.07
LINC00648-202ENST00000555985 P0C880 135 aa2.11□□□□□ -2.07
LINC00648-202ENST00000555985 A8MUU9 505 aa2.1□□□□□ -2.07
LINC00648-202ENST00000555985 KRTAP16-1A8MUX0 517 aa2.08□□□□□ -2.08
LINC00648-202ENST00000555985 IGKV2-30P06310 120 aa2.08□□□□□ -2.08
LINC00648-202ENST00000555985 RPL37P61927 97 aaKnown RBP2.07□□□□□ -2.08
LINC00648-202ENST00000555985 H0YAA0 97 aa2.06□□□□□ -2.08
LINC00648-202ENST00000555985 C20orf166-AS1Q96NR2 134 aa2.05□□□□□ -2.08
LINC00648-202ENST00000555985 C9orf92A6NGG3 77 aa2.05□□□□□ -2.08
LINC00648-202ENST00000555985 IGKV2D-30A0A075B6S6 120 aa2.04□□□□□ -2.08
LINC00648-202ENST00000555985 KRTAP15-1Q3LI76 137 aa2.04□□□□□ -2.08
LINC00648-202ENST00000555985 MT1HP80294 61 aa2.04□□□□□ -2.08
LINC00648-202ENST00000555985 CRIPTQ9P021 101 aa2.04□□□□□ -2.08
LINC00648-202ENST00000555985 CRCT1Q9UGL9 99 aa2.03□□□□□ -2.08
LINC00648-202ENST00000555985 A0A1B0GU33 70 aa2.02□□□□□ -2.09
LINC00648-202ENST00000555985 NDUFAF8A1L188 74 aa2.01□□□□□ -2.09
LINC00648-202ENST00000555985 LUZP6Q538Z0 58 aa2.01□□□□□ -2.09
LINC00648-202ENST00000555985 SPINT4Q6UDR6 99 aa2.01□□□□□ -2.09
LINC00648-202ENST00000555985 H1FX-AS1Q4G0G2 97 aa2□□□□□ -2.09
LINC00648-202ENST00000555985 CAMK2N1Q7Z7J9 78 aa2□□□□□ -2.09
LINC00648-202ENST00000555985 K7ERS5 55 aa2□□□□□ -2.09
LINC00648-202ENST00000555985 KRTAP10-6P60371 365 aaPredicted RBP1.99□□□□□ -2.09
LINC00648-202ENST00000555985 SSPOA2VEC9 5147 aa1.96□□□□□ -2.1
LINC00648-202ENST00000555985 COX6B2Q6YFQ2 88 aa1.95□□□□□ -2.1
LINC00648-202ENST00000555985 C10orf95Q9H7T3 257 aa1.94□□□□□ -2.1
LINC00648-202ENST00000555985 MT2AP02795 61 aa1.9□□□□□ -2.1
LINC00648-202ENST00000555985 USH2AO75445 5202 aa1.89□□□□□ -2.11
LINC00648-202ENST00000555985 MT1FP04733 61 aa1.89□□□□□ -2.11
LINC00648-202ENST00000555985 KRTAP13-4Q3LI77 160 aa1.89□□□□□ -2.11
LINC00648-202ENST00000555985 KRTAP20-1Q3LI63 56 aa1.88□□□□□ -2.11
LINC00648-202ENST00000555985 KRTAP5-4Q6L8H1 288 aa1.88□□□□□ -2.11
LINC00648-202ENST00000555985 A0A0D9SG42 100 aa1.88□□□□□ -2.11
LINC00648-202ENST00000555985 S4R3F8 94 aa1.87□□□□□ -2.11
LINC00648-202ENST00000555985 M0R2T5 61 aa1.86□□□□□ -2.11
LINC00648-202ENST00000555985 KRTAP12-2P59991 146 aa1.84□□□□□ -2.11
LINC00648-202ENST00000555985 KRTAP4-4Q9BYR3 166 aa1.83□□□□□ -2.12
LINC00648-202ENST00000555985 KRTAP12-1P59990 96 aa1.82□□□□□ -2.12
LINC00648-202ENST00000555985 AHNAKQ09666 5890 aaKnown RBP1.81□□□□□ -2.12
LINC00648-202ENST00000555985 PLAC4Q8WY50 150 aa1.81□□□□□ -2.12
LINC00648-202ENST00000555985 FSIP2Q5CZC0 6907 aa1.81□□□□□ -2.12
LINC00648-202ENST00000555985 NEBP20929 6669 aa1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms