RNA–Protein interactions for RNA: ENST00000555542.5

PRKCH-216, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-216ENST00000555542 A6NN06 94 aa10.95□□□□□ -0.66
PRKCH-216ENST00000555542 ATOX1O00244 68 aa10.95□□□□□ -0.66
PRKCH-216ENST00000555542 MT1BP07438 61 aa10.95□□□□□ -0.66
PRKCH-216ENST00000555542 KRTAP19-8Q3LI54 63 aa10.92□□□□□ -0.66
PRKCH-216ENST00000555542 KRTAP6-3Q3LI67 103 aa10.91□□□□□ -0.66
PRKCH-216ENST00000555542 NDUFC1O43677 76 aa10.85□□□□□ -0.67
PRKCH-216ENST00000555542 LINC00643Q86TS7 51 aa10.85□□□□□ -0.67
PRKCH-216ENST00000555542 IMUPQ9GZP8 106 aa10.85□□□□□ -0.67
PRKCH-216ENST00000555542 CRIPTQ9P021 101 aa10.83□□□□□ -0.68
PRKCH-216ENST00000555542 LINC00208Q96KT6 92 aa10.78□□□□□ -0.68
PRKCH-216ENST00000555542 A8MUN3 132 aa10.76□□□□□ -0.69
PRKCH-216ENST00000555542 KRTAP10-5P60370 271 aa10.74□□□□□ -0.69
PRKCH-216ENST00000555542 MP68P56378 58 aa10.73□□□□□ -0.69
PRKCH-216ENST00000555542 H0YAA0 97 aa10.7□□□□□ -0.7
PRKCH-216ENST00000555542 A0A1B0GV90 55 aa10.67□□□□□ -0.7
PRKCH-216ENST00000555542 OCR1Q9BZK8 76 aa10.66□□□□□ -0.7
PRKCH-216ENST00000555542 ADM2Q7Z4H4 148 aa10.65□□□□□ -0.7
PRKCH-216ENST00000555542 J3QR89 54 aa10.56□□□□□ -0.72
PRKCH-216ENST00000555542 H3BPC8 53 aa10.51□□□□□ -0.73
PRKCH-216ENST00000555542 SCGB1A1P11684 91 aa10.51□□□□□ -0.73
PRKCH-216ENST00000555542 NEBP20929 6669 aa10.47□□□□□ -0.73
PRKCH-216ENST00000555542 MUC12Q9UKN1 5478 aa10.43□□□□□ -0.74
PRKCH-216ENST00000555542 C20orf197Q8N268 126 aa10.41□□□□□ -0.74
PRKCH-216ENST00000555542 DMAC1Q96GE9 116 aa10.41□□□□□ -0.74
PRKCH-216ENST00000555542 R4GN34 69 aa10.41□□□□□ -0.74
PRKCH-216ENST00000555542 PLAC4Q8WY50 150 aa10.39□□□□□ -0.75
PRKCH-216ENST00000555542 PRO2289Q9P1D8 64 aa10.39□□□□□ -0.75
PRKCH-216ENST00000555542 P0C880 135 aa10.35□□□□□ -0.75
PRKCH-216ENST00000555542 KRTAP5-9P26371 169 aa10.35□□□□□ -0.75
PRKCH-216ENST00000555542 M0QZ58 72 aa10.32□□□□□ -0.76
PRKCH-216ENST00000555542 MT1XP80297 61 aa10.26□□□□□ -0.77
PRKCH-216ENST00000555542 TRAV7A0A075B6U4 112 aa10.21□□□□□ -0.77
PRKCH-216ENST00000555542 LINC01554Q52M75 96 aa10.21□□□□□ -0.77
PRKCH-216ENST00000555542 KRTAP20-1Q3LI63 56 aa10.19□□□□□ -0.78
PRKCH-216ENST00000555542 KRTAP3-2Q9BYR7 98 aa10.19□□□□□ -0.78
PRKCH-216ENST00000555542 KMT2DO14686 5537 aa10.18□□□□□ -0.78
PRKCH-216ENST00000555542 ACYP2P14621 99 aa10.18□□□□□ -0.78
PRKCH-216ENST00000555542 MT-ATP8P03928 68 aa10.15□□□□□ -0.78
PRKCH-216ENST00000555542 SMIM20Q8N5G0 67 aa10.15□□□□□ -0.78
PRKCH-216ENST00000555542 SPTSSBQ8NFR3 76 aa10.12□□□□□ -0.79
PRKCH-216ENST00000555542 SPRR2FQ96RM1 72 aa10.12□□□□□ -0.79
PRKCH-216ENST00000555542 MDN1Q9NU22 5596 aa10.11□□□□□ -0.79
PRKCH-216ENST00000555542 K7ERU9 68 aa10.08□□□□□ -0.8
PRKCH-216ENST00000555542 CHKB-CPT1BH3BT56 60 aa10.06□□□□□ -0.8
PRKCH-216ENST00000555542 KRTAP8-1Q8IUC2 63 aa10.06□□□□□ -0.8
PRKCH-216ENST00000555542 KRTAP12-2P59991 146 aa10.02□□□□□ -0.81
PRKCH-216ENST00000555542 SPRR2EP22531 72 aa9.99□□□□□ -0.81
PRKCH-216ENST00000555542 SPRR2BP35325 72 aa9.99□□□□□ -0.81
PRKCH-216ENST00000555542 SPRR2AP35326 72 aa9.99□□□□□ -0.81
PRKCH-216ENST00000555542 SNURFQ9Y675 71 aa9.96□□□□□ -0.82
PRKCH-216ENST00000555542 KRTAP2-3P0C7H8 128 aa9.88□□□□□ -0.83
PRKCH-216ENST00000555542 KRTAP2-4Q9BYR9 128 aa9.88□□□□□ -0.83
PRKCH-216ENST00000555542 KRTAP4-8A0A0G2JLE6 195 aa9.85□□□□□ -0.83
PRKCH-216ENST00000555542 KRTAP4-8Q9BYQ9 185 aa9.85□□□□□ -0.83
PRKCH-216ENST00000555542 KRTAP10-7P60409 375 aaPredicted RBP9.81□□□□□ -0.84
PRKCH-216ENST00000555542 SPANXA2-OT1Q8N9U9 137 aa9.8□□□□□ -0.84
PRKCH-216ENST00000555542 LCE1AQ5T7P2 110 aa9.78□□□□□ -0.84
PRKCH-216ENST00000555542 SERP2Q8N6R1 65 aa9.74□□□□□ -0.85
PRKCH-216ENST00000555542 KRTAP10-12P60413 245 aa9.73□□□□□ -0.85
PRKCH-216ENST00000555542 SPRR2DP22532 72 aa9.66□□□□□ -0.86
PRKCH-216ENST00000555542 KRTAP13-4Q3LI77 160 aa9.61□□□□□ -0.87
PRKCH-216ENST00000555542 CAMK2N1Q7Z7J9 78 aa9.59□□□□□ -0.87
PRKCH-216ENST00000555542 COA5Q86WW8 74 aa9.57□□□□□ -0.88
PRKCH-216ENST00000555542 KRTAP2-2Q9BYT5 123 aa9.56□□□□□ -0.88
PRKCH-216ENST00000555542 KRTAP2-1Q9BYU5 128 aa9.56□□□□□ -0.88
PRKCH-216ENST00000555542 SEC61GP60059 68 aa9.52□□□□□ -0.89
PRKCH-216ENST00000555542 SERP1Q9Y6X1 66 aa9.49□□□□□ -0.89
PRKCH-216ENST00000555542 A0A0D9SG42 100 aa9.41□□□□□ -0.9
PRKCH-216ENST00000555542 COX7CP15954 63 aa9.41□□□□□ -0.9
PRKCH-216ENST00000555542 LCE3BQ5TA77 95 aa9.39□□□□□ -0.91
PRKCH-216ENST00000555542 SPATA8Q6RVD6 105 aa9.33□□□□□ -0.92
PRKCH-216ENST00000555542 A0A1B0GU33 70 aa9.3□□□□□ -0.92
PRKCH-216ENST00000555542 SPINT4Q6UDR6 99 aa9.29□□□□□ -0.92
PRKCH-216ENST00000555542 H7BZZ5 65 aa9.27□□□□□ -0.93
PRKCH-216ENST00000555542 CYSTM1Q9H1C7 97 aa9.25□□□□□ -0.93
PRKCH-216ENST00000555542 KRTAP19-7Q3SYF9 63 aa9.15□□□□□ -0.94
PRKCH-216ENST00000555542 A0A1B0GU69 56 aa9.13□□□□□ -0.95
PRKCH-216ENST00000555542 KRTAP12-1P59990 96 aa9.13□□□□□ -0.95
PRKCH-216ENST00000555542 MT1EP04732 61 aa9.1□□□□□ -0.95
PRKCH-216ENST00000555542 SMIM26A0A096LP01 95 aa9.06□□□□□ -0.96
PRKCH-216ENST00000555542 LCE5AQ5TCM9 118 aa9.06□□□□□ -0.96
PRKCH-216ENST00000555542 KRTAP19-3Q7Z4W3 81 aa9.06□□□□□ -0.96
PRKCH-216ENST00000555542 ANAPC13Q9BS18 74 aa9.06□□□□□ -0.96
PRKCH-216ENST00000555542 A8MU10 97 aa8.96□□□□□ -0.98
PRKCH-216ENST00000555542 KRTAP19-5Q3LI72 72 aa8.95□□□□□ -0.98
PRKCH-216ENST00000555542 DSTQ03001 7570 aaKnown RBP8.91□□□□□ -0.98
PRKCH-216ENST00000555542 CCDC179H3BU77 68 aa8.85□□□□□ -0.99
PRKCH-216ENST00000555542 PRR15LQ9BU68 103 aa8.85□□□□□ -0.99
PRKCH-216ENST00000555542 MT1GP13640 62 aa8.83□□□□□ -1
PRKCH-216ENST00000555542 PP632Q6XCG6 107 aa8.82□□□□□ -1
PRKCH-216ENST00000555542 ATP5EP56381 51 aaPredicted RBP8.81□□□□□ -1
PRKCH-216ENST00000555542 TNP1P09430 55 aa8.79□□□□□ -1
PRKCH-216ENST00000555542 KRTAP4-9Q9BYQ8 210 aa8.75□□□□□ -1.01
PRKCH-216ENST00000555542 C10orf95Q9H7T3 257 aa8.73□□□□□ -1.01
PRKCH-216ENST00000555542 LCE3AQ5TA76 89 aa8.72□□□□□ -1.01
PRKCH-216ENST00000555542 MT1MQ8N339 61 aa8.68□□□□□ -1.02
PRKCH-216ENST00000555542 MT1LQ93083 61 aa8.68□□□□□ -1.02
PRKCH-216ENST00000555542 LINC01558Q9Y6Z2 57 aa8.65□□□□□ -1.02
PRKCH-216ENST00000555542 TMEM258P61165 79 aa8.52□□□□□ -1.05
PRKCH-216ENST00000555542 LCE1DQ5T752 114 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms