RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 SPANXCQ9NY87 97 aa0.43□□□□□ -2.34
PRPF39-208ENST00000554785 SS18L2Q9UHA2 77 aa0.43□□□□□ -2.34
PRPF39-208ENST00000554785 IGLV5-48A0A075B6I7 105 aa0.43□□□□□ -2.34
PRPF39-208ENST00000554785 TRAV13-2A0A0B4J235 113 aa0.43□□□□□ -2.34
PRPF39-208ENST00000554785 K7EQZ3 153 aa0.43□□□□□ -2.34
PRPF39-208ENST00000554785 PDE6GP18545 87 aa0.43□□□□□ -2.34
PRPF39-208ENST00000554785 Q6ZQT0 140 aa0.43□□□□□ -2.34
PRPF39-208ENST00000554785 LINC00308Q8TCZ7 52 aa0.43□□□□□ -2.34
PRPF39-208ENST00000554785 S100ZQ8WXG8 99 aa0.43□□□□□ -2.34
PRPF39-208ENST00000554785 HSPB8Q9UJY1 196 aa0.43□□□□□ -2.34
PRPF39-208ENST00000554785 LAMTOR2Q9Y2Q5 125 aa0.43□□□□□ -2.34
PRPF39-208ENST00000554785 S4R3F8 94 aa0.43□□□□□ -2.34
PRPF39-208ENST00000554785 NDUFC2O95298 119 aa0.42□□□□□ -2.34
PRPF39-208ENST00000554785 FABP2P12104 132 aa0.42□□□□□ -2.34
PRPF39-208ENST00000554785 FABP4P15090 132 aa0.42□□□□□ -2.34
PRPF39-208ENST00000554785 OCIAD2Q56VL3 154 aa0.42□□□□□ -2.34
PRPF39-208ENST00000554785 KRTAP19-3Q7Z4W3 81 aa0.42□□□□□ -2.34
PRPF39-208ENST00000554785 HIST3H2BBQ8N257 126 aa0.42□□□□□ -2.34
PRPF39-208ENST00000554785 SMIM11BQ8TCY0 68 aa0.42□□□□□ -2.34
PRPF39-208ENST00000554785 PLAC4Q8WY50 150 aa0.42□□□□□ -2.34
PRPF39-208ENST00000554785 IFI27L1Q96BM0 104 aa0.42□□□□□ -2.34
PRPF39-208ENST00000554785 SPANXDQ9BXN6 97 aa0.42□□□□□ -2.34
PRPF39-208ENST00000554785 SNURFQ9Y675 71 aa0.42□□□□□ -2.34
PRPF39-208ENST00000554785 A0A087WVE0 104 aa0.41□□□□□ -2.34
PRPF39-208ENST00000554785 hADV29S1A0JD25 119 aa0.41□□□□□ -2.34
PRPF39-208ENST00000554785 ZNF815PA8K554 130 aa0.41□□□□□ -2.34
PRPF39-208ENST00000554785 LINC00587B1AMM8 73 aa0.41□□□□□ -2.34
PRPF39-208ENST00000554785 H3BMG7 143 aa0.41□□□□□ -2.34
PRPF39-208ENST00000554785 KRTAP20-2Q3LI61 65 aa0.41□□□□□ -2.34
PRPF39-208ENST00000554785 Q6JHZ5 121 aa0.41□□□□□ -2.34
PRPF39-208ENST00000554785 PRR15Q8IV56 129 aa0.41□□□□□ -2.34
PRPF39-208ENST00000554785 C18orf32Q8TCD1 76 aa0.41□□□□□ -2.34
PRPF39-208ENST00000554785 DSCR8Q96T75 97 aa0.41□□□□□ -2.34
PRPF39-208ENST00000554785 TRACP01848 142 aa0.41□□□□□ -2.34
PRPF39-208ENST00000554785 CCKP06307 115 aa0.41□□□□□ -2.34
PRPF39-208ENST00000554785 CSAG1Q6PB30 78 aa0.41□□□□□ -2.34
PRPF39-208ENST00000554785 TEN1Q86WV5 123 aa0.41□□□□□ -2.34
PRPF39-208ENST00000554785 LINC00472Q9H8W2 130 aa0.41□□□□□ -2.34
PRPF39-208ENST00000554785 TRAV12-1A0A0B4J245 112 aa0.4□□□□□ -2.35
PRPF39-208ENST00000554785 A0A1W2PPM0 123 aa0.4□□□□□ -2.35
PRPF39-208ENST00000554785 K7EP34 96 aa0.4□□□□□ -2.35
PRPF39-208ENST00000554785 M0QZ58 72 aa0.4□□□□□ -2.35
PRPF39-208ENST00000554785 IGKCP01834 107 aa0.4□□□□□ -2.35
PRPF39-208ENST00000554785 MT1EP04732 61 aa0.4□□□□□ -2.35
PRPF39-208ENST00000554785 BAALC-AS2P0C853 105 aa0.4□□□□□ -2.35
PRPF39-208ENST00000554785 PLNP26678 52 aa0.4□□□□□ -2.35
PRPF39-208ENST00000554785 KRTAP19-7Q3SYF9 63 aa0.4□□□□□ -2.35
PRPF39-208ENST00000554785 LINC00575Q6W349 94 aa0.4□□□□□ -2.35
PRPF39-208ENST00000554785 MUSTN1Q8IVN3 82 aa0.4□□□□□ -2.35
PRPF39-208ENST00000554785 ATOH7Q8N100 152 aa0.4□□□□□ -2.35
PRPF39-208ENST00000554785 hDV103S1A0JD37 113 aa0.4□□□□□ -2.35
PRPF39-208ENST00000554785 DPM2O94777 84 aa0.4□□□□□ -2.35
PRPF39-208ENST00000554785 LEPROTL1O95214 131 aa0.4□□□□□ -2.35
PRPF39-208ENST00000554785 MT-ND4LP03901 98 aa0.4□□□□□ -2.35
PRPF39-208ENST00000554785 PEA15Q15121 130 aa0.4□□□□□ -2.35
PRPF39-208ENST00000554785 SEC11CQ9BY50 192 aa0.4□□□□□ -2.35
PRPF39-208ENST00000554785 LINC01549A6NIU2 74 aa0.39□□□□□ -2.35
PRPF39-208ENST00000554785 TIMM17BO60830 172 aa0.39□□□□□ -2.35
PRPF39-208ENST00000554785 TRGC2P03986 189 aa0.39□□□□□ -2.35
PRPF39-208ENST00000554785 S100A6P06703 90 aa0.39□□□□□ -2.35
PRPF39-208ENST00000554785 S100PP25815 95 aa0.39□□□□□ -2.35
PRPF39-208ENST00000554785 MT1MQ8N339 61 aa0.39□□□□□ -2.35
PRPF39-208ENST00000554785 HIST1H2BLQ99880 126 aa0.39□□□□□ -2.35
PRPF39-208ENST00000554785 LINC01546A6NGU7 62 aa0.38□□□□□ -2.35
PRPF39-208ENST00000554785 NDUFB1O75438 58 aa0.38□□□□□ -2.35
PRPF39-208ENST00000554785 MT-ATP8P03928 68 aa0.38□□□□□ -2.35
PRPF39-208ENST00000554785 KRTAP19-5Q3LI72 72 aa0.38□□□□□ -2.35
PRPF39-208ENST00000554785 LOC110117498A0A087WWA1 95 aa0.38□□□□□ -2.35
PRPF39-208ENST00000554785 TRBV7-6A0A0J9YX20 115 aa0.38□□□□□ -2.35
PRPF39-208ENST00000554785 MT1GP13640 62 aa0.38□□□□□ -2.35
PRPF39-208ENST00000554785 BVES-AS1Q5T3Y7 98 aa0.38□□□□□ -2.35
PRPF39-208ENST00000554785 RAB37Q96AX2 223 aa0.38□□□□□ -2.35
PRPF39-208ENST00000554785 MRPL34Q9BQ48 92 aaKnown RBP0.38□□□□□ -2.35
PRPF39-208ENST00000554785 TRBV7-4A0A0J9YYF1 115 aa0.37□□□□□ -2.35
PRPF39-208ENST00000554785 MMP24-AS1A0A0U1RRL7 71 aa0.37□□□□□ -2.35
PRPF39-208ENST00000554785 HCG22E2RYF7 251 aa0.37□□□□□ -2.35
PRPF39-208ENST00000554785 DNAL4O96015 105 aa0.37□□□□□ -2.35
PRPF39-208ENST00000554785 KRTDAPP60985 99 aa0.37□□□□□ -2.35
PRPF39-208ENST00000554785 A0A0D9SG42 100 aa0.37□□□□□ -2.35
PRPF39-208ENST00000554785 MT1LQ93083 61 aa0.37□□□□□ -2.35
PRPF39-208ENST00000554785 CHCHD1Q96BP2 118 aaKnown RBP0.37□□□□□ -2.35
PRPF39-208ENST00000554785 C14orf132Q9NPU4 83 aa0.37□□□□□ -2.35
PRPF39-208ENST00000554785 CRIPTQ9P021 101 aa0.37□□□□□ -2.35
PRPF39-208ENST00000554785 SYS1-DBNDD2H3BUS1 97 aa0.36□□□□□ -2.35
PRPF39-208ENST00000554785 NDUFC1O43677 76 aa0.36□□□□□ -2.35
PRPF39-208ENST00000554785 APOC3P02656 99 aa0.36□□□□□ -2.35
PRPF39-208ENST00000554785 IFITM1P13164 125 aa0.36□□□□□ -2.35
PRPF39-208ENST00000554785 C10orf95Q9H7T3 257 aa0.36□□□□□ -2.35
PRPF39-208ENST00000554785 CDC42SE1Q9NRR8 79 aa0.36□□□□□ -2.35
PRPF39-208ENST00000554785 ORMDL1Q9P0S3 153 aa0.36□□□□□ -2.35
PRPF39-208ENST00000554785 MUC16Q8WXI7 14507 aa0.36□□□□□ -2.35
PRPF39-208ENST00000554785 INE1O15225 51 aa0.35□□□□□ -2.35
PRPF39-208ENST00000554785 SNCGO76070 127 aa0.35□□□□□ -2.35
PRPF39-208ENST00000554785 CASC2Q6XLA1 102 aa0.35□□□□□ -2.35
PRPF39-208ENST00000554785 TMEM254Q8TBM7 123 aa0.35□□□□□ -2.35
PRPF39-208ENST00000554785 PPDPFLQ8WWR9 84 aa0.35□□□□□ -2.35
PRPF39-208ENST00000554785 COPS9Q8WXC6 57 aa0.35□□□□□ -2.35
PRPF39-208ENST00000554785 TMEM218A2RU14 115 aa0.35□□□□□ -2.35
PRPF39-208ENST00000554785 J3KT08 172 aa0.35□□□□□ -2.35
PRPF39-208ENST00000554785 K7ERJ3 54 aa0.35□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms