RNA–Protein interactions for RNA: ENST00000554353.1

MTHFD1-206, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-206ENST00000554353 Q6ZRN7 208 aaPredicted RBP3.01□□□□□ -1.93
MTHFD1-206ENST00000554353 LRCOL1A6NCL2 159 aa3□□□□□ -1.93
MTHFD1-206ENST00000554353 PSCAO43653 123 aa3□□□□□ -1.93
MTHFD1-206ENST00000554353 SPRR4Q96PI1 79 aa3□□□□□ -1.93
MTHFD1-206ENST00000554353 UBR4Q5T4S7 5183 aa2.99□□□□□ -1.93
MTHFD1-206ENST00000554353 A0A087WTM6 91 aa2.99□□□□□ -1.93
MTHFD1-206ENST00000554353 IGKV2-24A0A0C4DH68 120 aa2.99□□□□□ -1.93
MTHFD1-206ENST00000554353 KRTAP10-1P60331 282 aa2.99□□□□□ -1.93
MTHFD1-206ENST00000554353 MIR22HGQ0VDD5 57 aa2.99□□□□□ -1.93
MTHFD1-206ENST00000554353 NREPQ16612 68 aa2.99□□□□□ -1.93
MTHFD1-206ENST00000554353 KRTAP25-1Q3LHN0 102 aa2.99□□□□□ -1.93
MTHFD1-206ENST00000554353 C1orf137Q5JT78 98 aa2.99□□□□□ -1.93
MTHFD1-206ENST00000554353 Q5VSD8 79 aa2.99□□□□□ -1.93
MTHFD1-206ENST00000554353 C9orf163Q8N9P6 203 aa2.99□□□□□ -1.93
MTHFD1-206ENST00000554353 SPTSSBQ8NFR3 76 aa2.99□□□□□ -1.93
MTHFD1-206ENST00000554353 HIGD2AQ9BW72 106 aa2.99□□□□□ -1.93
MTHFD1-206ENST00000554353 CYP4F30PQ9H0H9 118 aa2.99□□□□□ -1.93
MTHFD1-206ENST00000554353 HMCN2Q8NDA2 5059 aa2.98□□□□□ -1.93
MTHFD1-206ENST00000554353 SMR3BP02814 79 aaPredicted RBP2.98□□□□□ -1.93
MTHFD1-206ENST00000554353 A0A0G2JQZ4 141 aa2.97□□□□□ -1.93
MTHFD1-206ENST00000554353 H7BZZ5 65 aa2.97□□□□□ -1.93
MTHFD1-206ENST00000554353 SPRR1BP22528 89 aa2.97□□□□□ -1.93
MTHFD1-206ENST00000554353 PRLHP81277 87 aa2.97□□□□□ -1.93
MTHFD1-206ENST00000554353 KLKP1Q107X0 134 aa2.97□□□□□ -1.93
MTHFD1-206ENST00000554353 SPINT4Q6UDR6 99 aa2.97□□□□□ -1.93
MTHFD1-206ENST00000554353 IGFL1Q6UW32 110 aa2.97□□□□□ -1.93
MTHFD1-206ENST00000554353 C20orf197Q8N268 126 aa2.97□□□□□ -1.93
MTHFD1-206ENST00000554353 LINC00474Q9P2X8 69 aa2.97□□□□□ -1.93
MTHFD1-206ENST00000554353 KRTAP13-1Q8IUC0 172 aa2.96□□□□□ -1.94
MTHFD1-206ENST00000554353 HCG22E2RYF7 251 aa2.95□□□□□ -1.94
MTHFD1-206ENST00000554353 SNURFQ9Y675 71 aa2.95□□□□□ -1.94
MTHFD1-206ENST00000554353 TNXBP22105 4242 aa2.95□□□□□ -1.94
MTHFD1-206ENST00000554353 F8WEM9 126 aa2.94□□□□□ -1.94
MTHFD1-206ENST00000554353 LINC00483Q53H64 154 aa2.94□□□□□ -1.94
MTHFD1-206ENST00000554353 CDC42SE1Q9NRR8 79 aa2.94□□□□□ -1.94
MTHFD1-206ENST00000554353 K7EQZ3 153 aa2.93□□□□□ -1.94
MTHFD1-206ENST00000554353 SPACA4Q8TDM5 124 aa2.93□□□□□ -1.94
MTHFD1-206ENST00000554353 LRP2P98164 4655 aa2.92□□□□□ -1.94
MTHFD1-206ENST00000554353 KRTAP5-8O75690 187 aa2.91□□□□□ -1.94
MTHFD1-206ENST00000554353 LINC00472Q9H8W2 130 aa2.91□□□□□ -1.94
MTHFD1-206ENST00000554353 PSORS1C2Q9UIG4 136 aa2.91□□□□□ -1.94
MTHFD1-206ENST00000554353 RPL37AP61513 92 aaKnown RBP2.9□□□□□ -1.95
MTHFD1-206ENST00000554353 ZCCHC13Q8WW36 166 aaKnown RBP2.9□□□□□ -1.95
MTHFD1-206ENST00000554353 R4GN34 69 aa2.9□□□□□ -1.95
MTHFD1-206ENST00000554353 P0C880 135 aa2.89□□□□□ -1.95
MTHFD1-206ENST00000554353 Q6ZSA8 131 aa2.89□□□□□ -1.95
MTHFD1-206ENST00000554353 PLAC8Q9NZF1 115 aa2.89□□□□□ -1.95
MTHFD1-206ENST00000554353 Q96NJ1 140 aa2.88□□□□□ -1.95
MTHFD1-206ENST00000554353 KRTAP10-4P60372 401 aaPredicted RBP2.87□□□□□ -1.95
MTHFD1-206ENST00000554353 WFDC13Q8IUB5 93 aa2.87□□□□□ -1.95
MTHFD1-206ENST00000554353 LIMD2Q9BT23 127 aa2.87□□□□□ -1.95
MTHFD1-206ENST00000554353 MMP24-AS1A0A0U1RRL7 71 aa2.86□□□□□ -1.95
MTHFD1-206ENST00000554353 MOBPQ13875 183 aa2.86□□□□□ -1.95
MTHFD1-206ENST00000554353 PRO2289Q9P1D8 64 aa2.86□□□□□ -1.95
MTHFD1-206ENST00000554353 LPAP08519 4548 aa2.86□□□□□ -1.95
MTHFD1-206ENST00000554353 RNF213Q63HN8 5207 aa2.86□□□□□ -1.95
MTHFD1-206ENST00000554353 CHKB-CPT1BH3BT56 60 aa2.85□□□□□ -1.95
MTHFD1-206ENST00000554353 DMAC1Q96GE9 116 aa2.85□□□□□ -1.95
MTHFD1-206ENST00000554353 TRAV22A0A0B4J277 110 aa2.84□□□□□ -1.95
MTHFD1-206ENST00000554353 CSAG1Q6PB30 78 aa2.84□□□□□ -1.95
MTHFD1-206ENST00000554353 H0Y9P7 68 aa2.82□□□□□ -1.96
MTHFD1-206ENST00000554353 HRES1P13985 223 aa2.82□□□□□ -1.96
MTHFD1-206ENST00000554353 Q5VV11 94 aa2.82□□□□□ -1.96
MTHFD1-206ENST00000554353 NDUFB1O75438 58 aa2.81□□□□□ -1.96
MTHFD1-206ENST00000554353 LINC00208Q96KT6 92 aa2.81□□□□□ -1.96
MTHFD1-206ENST00000554353 MT1HL1P0DM35 61 aa2.8□□□□□ -1.96
MTHFD1-206ENST00000554353 KRTAP13-2Q52LG2 175 aa2.79□□□□□ -1.96
MTHFD1-206ENST00000554353 SSBP3-AS1Q7Z2R9 100 aa2.79□□□□□ -1.96
MTHFD1-206ENST00000554353 TP53AIP1Q9HCN2 124 aa2.78□□□□□ -1.96
MTHFD1-206ENST00000554353 KRTAP13-3Q3SY46 172 aa2.77□□□□□ -1.97
MTHFD1-206ENST00000554353 MRPL34Q9BQ48 92 aaKnown RBP2.77□□□□□ -1.97
MTHFD1-206ENST00000554353 MUC2Q02817 5179 aa2.76□□□□□ -1.97
MTHFD1-206ENST00000554353 SPAG11AQ6PDA7 123 aa2.75□□□□□ -1.97
MTHFD1-206ENST00000554353 SPINK6Q6UWN8 80 aa2.75□□□□□ -1.97
MTHFD1-206ENST00000554353 LOC101927531A0A1B0GV80 90 aa2.74□□□□□ -1.97
MTHFD1-206ENST00000554353 KRTAP10-8P60410 259 aa2.74□□□□□ -1.97
MTHFD1-206ENST00000554353 PCOTHQ58A44 107 aa2.73□□□□□ -1.97
MTHFD1-206ENST00000554353 COA5Q86WW8 74 aa2.72□□□□□ -1.97
MTHFD1-206ENST00000554353 LCE3AQ5TA76 89 aa2.71□□□□□ -1.98
MTHFD1-206ENST00000554353 TPRXLQ17RH7 258 aa2.7□□□□□ -1.98
MTHFD1-206ENST00000554353 FAT4Q6V0I7 4981 aa2.69□□□□□ -1.98
MTHFD1-206ENST00000554353 PRR15LQ9BU68 103 aa2.68□□□□□ -1.98
MTHFD1-206ENST00000554353 MUC17Q685J3 4493 aa2.68□□□□□ -1.98
MTHFD1-206ENST00000554353 SPINK1P00995 79 aa2.67□□□□□ -1.98
MTHFD1-206ENST00000554353 RPS29P62273 56 aaKnown RBP2.67□□□□□ -1.98
MTHFD1-206ENST00000554353 LINC01558Q9Y6Z2 57 aa2.67□□□□□ -1.98
MTHFD1-206ENST00000554353 LINC00304Q8N9R0 145 aa2.65□□□□□ -1.99
MTHFD1-206ENST00000554353 ACYP2P14621 99 aa2.64□□□□□ -1.99
MTHFD1-206ENST00000554353 UQCR11O14957 56 aa2.63□□□□□ -1.99
MTHFD1-206ENST00000554353 LCE3DQ9BYE3 92 aa2.63□□□□□ -1.99
MTHFD1-206ENST00000554353 SPINK7P58062 85 aa2.6□□□□□ -1.99
MTHFD1-206ENST00000554353 INE1O15225 51 aa2.59□□□□□ -1.99
MTHFD1-206ENST00000554353 SPRR5A0A1B0GTR4 108 aa2.58□□□□□ -2
MTHFD1-206ENST00000554353 C9orf92A6NGG3 77 aa2.58□□□□□ -2
MTHFD1-206ENST00000554353 KRTAP5-5Q701N2 237 aaPredicted RBP2.54□□□□□ -2
MTHFD1-206ENST00000554353 A0A1B0GU69 56 aa2.53□□□□□ -2
MTHFD1-206ENST00000554353 SPATA8Q6RVD6 105 aa2.53□□□□□ -2
MTHFD1-206ENST00000554353 KRTAP10-10P60014 251 aa2.5□□□□□ -2.01
MTHFD1-206ENST00000554353 PP632Q6XCG6 107 aa2.5□□□□□ -2.01
MTHFD1-206ENST00000554353 COX6B2Q6YFQ2 88 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms