RNA–Protein interactions for RNA: ENST00000554081.5

PRPF39-205, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 3,223 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-205ENST00000554081 FAT4Q6V0I7 4981 aa1.4□□□□□ -2.19
PRPF39-205ENST00000554081 BPY2O14599 106 aa1.4□□□□□ -2.19
PRPF39-205ENST00000554081 CAMK2N1Q7Z7J9 78 aa1.4□□□□□ -2.19
PRPF39-205ENST00000554081 PKHD1L1Q86WI1 4243 aa1.39□□□□□ -2.19
PRPF39-205ENST00000554081 LUZP6Q538Z0 58 aa1.39□□□□□ -2.19
PRPF39-205ENST00000554081 ATP5EP2Q5VTU8 51 aa1.39□□□□□ -2.19
PRPF39-205ENST00000554081 ADM2Q7Z4H4 148 aa1.39□□□□□ -2.19
PRPF39-205ENST00000554081 LINC01546A6NGU7 62 aa1.39□□□□□ -2.19
PRPF39-205ENST00000554081 ROMO1P60602 79 aa1.39□□□□□ -2.19
PRPF39-205ENST00000554081 Q5VV11 94 aa1.39□□□□□ -2.19
PRPF39-205ENST00000554081 SMIM29Q86T20 159 aa1.39□□□□□ -2.19
PRPF39-205ENST00000554081 TRAV22A0A0B4J277 110 aa1.38□□□□□ -2.19
PRPF39-205ENST00000554081 A0A1B0GVX0 72 aa1.38□□□□□ -2.19
PRPF39-205ENST00000554081 A8MWP4 228 aa1.38□□□□□ -2.19
PRPF39-205ENST00000554081 HCG22E2RYF7 251 aa1.38□□□□□ -2.19
PRPF39-205ENST00000554081 K7ERS5 55 aa1.38□□□□□ -2.19
PRPF39-205ENST00000554081 A6NED7 52 aa1.38□□□□□ -2.19
PRPF39-205ENST00000554081 SPRR1AP35321 89 aa1.38□□□□□ -2.19
PRPF39-205ENST00000554081 KRTAP13-1Q8IUC0 172 aa1.38□□□□□ -2.19
PRPF39-205ENST00000554081 C20orf197Q8N268 126 aa1.38□□□□□ -2.19
PRPF39-205ENST00000554081 IGKV3D-7A0A0C4DH55 119 aa1.37□□□□□ -2.19
PRPF39-205ENST00000554081 LOC101927531A0A1B0GV80 90 aa1.37□□□□□ -2.19
PRPF39-205ENST00000554081 KRTAP5-1Q6L8H4 278 aa1.37□□□□□ -2.19
PRPF39-205ENST00000554081 TPRXLQ17RH7 258 aa1.36□□□□□ -2.19
PRPF39-205ENST00000554081 KRTAP13-3Q3SY46 172 aa1.36□□□□□ -2.19
PRPF39-205ENST00000554081 A0A1W2PNM2 257 aa1.36□□□□□ -2.19
PRPF39-205ENST00000554081 C1orf64Q8NEQ6 169 aa1.36□□□□□ -2.19
PRPF39-205ENST00000554081 C20orf166-AS1Q96NR2 134 aa1.36□□□□□ -2.19
PRPF39-205ENST00000554081 UBL5Q9BZL1 73 aa1.36□□□□□ -2.19
PRPF39-205ENST00000554081 CASC2Q6XLA1 102 aa1.36□□□□□ -2.19
PRPF39-205ENST00000554081 KRTAP5-2Q701N4 177 aa1.36□□□□□ -2.19
PRPF39-205ENST00000554081 K7EQZ3 153 aa1.35□□□□□ -2.19
PRPF39-205ENST00000554081 Q6ZQT0 140 aa1.35□□□□□ -2.19
PRPF39-205ENST00000554081 TRBV7-4A0A0J9YYF1 115 aa1.35□□□□□ -2.19
PRPF39-205ENST00000554081 KRTAP10-10P60014 251 aa1.35□□□□□ -2.19
PRPF39-205ENST00000554081 Q8N9P0 234 aaPredicted RBP1.35□□□□□ -2.19
PRPF39-205ENST00000554081 A8MU10 97 aa1.34□□□□□ -2.19
PRPF39-205ENST00000554081 JMJD7-PLA2G4BH0Y9G9 81 aa1.34□□□□□ -2.19
PRPF39-205ENST00000554081 SPINK7P58062 85 aa1.34□□□□□ -2.19
PRPF39-205ENST00000554081 LINC00483Q53H64 154 aa1.34□□□□□ -2.19
PRPF39-205ENST00000554081 HMCN2Q8NDA2 5059 aa1.34□□□□□ -2.19
PRPF39-205ENST00000554081 A8MUU9 505 aa1.34□□□□□ -2.2
PRPF39-205ENST00000554081 KRTAP5-8O75690 187 aa1.34□□□□□ -2.2
PRPF39-205ENST00000554081 P0C880 135 aa1.34□□□□□ -2.2
PRPF39-205ENST00000554081 IGLV5-48A0A075B6I7 105 aa1.33□□□□□ -2.2
PRPF39-205ENST00000554081 CHKB-CPT1BH3BT56 60 aa1.33□□□□□ -2.2
PRPF39-205ENST00000554081 RPL37P61927 97 aaKnown RBP1.33□□□□□ -2.2
PRPF39-205ENST00000554081 LCE1EQ5T753 118 aa1.33□□□□□ -2.2
PRPF39-205ENST00000554081 SPANXA2-OT1Q8N9U9 137 aa1.33□□□□□ -2.2
PRPF39-205ENST00000554081 KRTAP4-1Q9BYQ7 146 aa1.33□□□□□ -2.2
PRPF39-205ENST00000554081 H3BPC8 53 aa1.32□□□□□ -2.2
PRPF39-205ENST00000554081 MIR22HGQ0VDD5 57 aa1.32□□□□□ -2.2
PRPF39-205ENST00000554081 SNURFQ9Y675 71 aa1.32□□□□□ -2.2
PRPF39-205ENST00000554081 SPRR1BP22528 89 aa1.32□□□□□ -2.2
PRPF39-205ENST00000554081 A0A087WVE0 104 aa1.32□□□□□ -2.2
PRPF39-205ENST00000554081 TMEM254Q8TBM7 123 aa1.31□□□□□ -2.2
PRPF39-205ENST00000554081 MRPL34Q9BQ48 92 aaKnown RBP1.3□□□□□ -2.2
PRPF39-205ENST00000554081 USH2AO75445 5202 aa1.3□□□□□ -2.2
PRPF39-205ENST00000554081 PDE6GP18545 87 aa1.3□□□□□ -2.2
PRPF39-205ENST00000554081 LINC00208Q96KT6 92 aa1.3□□□□□ -2.2
PRPF39-205ENST00000554081 LINC00846Q9NV44 126 aa1.3□□□□□ -2.2
PRPF39-205ENST00000554081 CSAG1Q6PB30 78 aa1.3□□□□□ -2.2
PRPF39-205ENST00000554081 ZCCHC13Q8WW36 166 aaKnown RBP1.3□□□□□ -2.2
PRPF39-205ENST00000554081 H3BQ85 93 aa1.29□□□□□ -2.2
PRPF39-205ENST00000554081 PRR15LQ9BU68 103 aa1.29□□□□□ -2.2
PRPF39-205ENST00000554081 A0A1B0GU33 70 aa1.29□□□□□ -2.2
PRPF39-205ENST00000554081 Q5W150 140 aa1.29□□□□□ -2.2
PRPF39-205ENST00000554081 LINC01558Q9Y6Z2 57 aa1.29□□□□□ -2.2
PRPF39-205ENST00000554081 KRTAP10-6P60371 365 aaPredicted RBP1.28□□□□□ -2.2
PRPF39-205ENST00000554081 LINC00472Q9H8W2 130 aa1.28□□□□□ -2.2
PRPF39-205ENST00000554081 RPS29P62273 56 aaKnown RBP1.28□□□□□ -2.2
PRPF39-205ENST00000554081 KRTAP25-1Q3LHN0 102 aa1.28□□□□□ -2.2
PRPF39-205ENST00000554081 DMAC1Q96GE9 116 aa1.28□□□□□ -2.2
PRPF39-205ENST00000554081 AHNAK2Q8IVF2 5795 aa1.27□□□□□ -2.21
PRPF39-205ENST00000554081 NDUFAF8A1L188 74 aa1.27□□□□□ -2.21
PRPF39-205ENST00000554081 H0Y9P7 68 aa1.27□□□□□ -2.21
PRPF39-205ENST00000554081 DSTQ03001 7570 aaKnown RBP1.26□□□□□ -2.21
PRPF39-205ENST00000554081 MT1HP80294 61 aa1.26□□□□□ -2.21
PRPF39-205ENST00000554081 KRTAP15-1Q3LI76 137 aa1.26□□□□□ -2.21
PRPF39-205ENST00000554081 TNXBP22105 4242 aa1.26□□□□□ -2.21
PRPF39-205ENST00000554081 MMP24-AS1A0A0U1RRL7 71 aa1.25□□□□□ -2.21
PRPF39-205ENST00000554081 CRCT1Q9UGL9 99 aa1.25□□□□□ -2.21
PRPF39-205ENST00000554081 S4R3F8 94 aa1.25□□□□□ -2.21
PRPF39-205ENST00000554081 SPATA8Q6RVD6 105 aa1.25□□□□□ -2.21
PRPF39-205ENST00000554081 KRTAP3-1Q9BYR8 98 aa1.25□□□□□ -2.21
PRPF39-205ENST00000554081 LOC110117498A0A087WWA1 95 aa1.24□□□□□ -2.21
PRPF39-205ENST00000554081 H1FX-AS1Q4G0G2 97 aa1.24□□□□□ -2.21
PRPF39-205ENST00000554081 A0A0D9SG42 100 aa1.23□□□□□ -2.21
PRPF39-205ENST00000554081 UQCR11O14957 56 aa1.23□□□□□ -2.21
PRPF39-205ENST00000554081 R4GN34 69 aa1.23□□□□□ -2.21
PRPF39-205ENST00000554081 OBSCNQ5VST9 7968 aa1.23□□□□□ -2.21
PRPF39-205ENST00000554081 SSPOA2VEC9 5147 aa1.23□□□□□ -2.21
PRPF39-205ENST00000554081 PRO2289Q9P1D8 64 aa1.23□□□□□ -2.21
PRPF39-205ENST00000554081 KMT2DO14686 5537 aa1.22□□□□□ -2.21
PRPF39-205ENST00000554081 MUC17Q685J3 4493 aa1.22□□□□□ -2.21
PRPF39-205ENST00000554081 MACF1Q9UPN3 7388 aaKnown RBP1.22□□□□□ -2.21
PRPF39-205ENST00000554081 HRES1P13985 223 aa1.22□□□□□ -2.21
PRPF39-205ENST00000554081 SYNE2Q8WXH0 6885 aaKnown RBP1.21□□□□□ -2.22
PRPF39-205ENST00000554081 M0QZ58 72 aa1.21□□□□□ -2.22
PRPF39-205ENST00000554081 TP53AIP1Q9HCN2 124 aa1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms