RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 LINC00643Q86TS7 51 aa2.53□□□□□ -2
CKAP4-203ENST00000553039 SIGMAR1Q99720 223 aa2.53□□□□□ -2
CKAP4-203ENST00000553039 MUC12Q9UKN1 5478 aa2.53□□□□□ -2
CKAP4-203ENST00000553039 IGFL1Q6UW32 110 aa2.52□□□□□ -2.01
CKAP4-203ENST00000553039 A0A1W2PNM2 257 aa2.51□□□□□ -2.01
CKAP4-203ENST00000553039 MT-ATP8P03928 68 aa2.51□□□□□ -2.01
CKAP4-203ENST00000553039 PMAIP1Q13794 54 aa2.51□□□□□ -2.01
CKAP4-203ENST00000553039 TRBV7-7A0A0K0K1E9 115 aa2.5□□□□□ -2.01
CKAP4-203ENST00000553039 A8MWP4 228 aa2.5□□□□□ -2.01
CKAP4-203ENST00000553039 LINC00313P59037 77 aa2.5□□□□□ -2.01
CKAP4-203ENST00000553039 NREPQ16612 68 aa2.5□□□□□ -2.01
CKAP4-203ENST00000553039 KRTAP4-7Q9BYR0 210 aa2.5□□□□□ -2.01
CKAP4-203ENST00000553039 IMUPQ9GZP8 106 aa2.5□□□□□ -2.01
CKAP4-203ENST00000553039 A0A087WSZ3 146 aa2.49□□□□□ -2.01
CKAP4-203ENST00000553039 A0A0G2JQZ4 141 aa2.49□□□□□ -2.01
CKAP4-203ENST00000553039 SCGB1A1P11684 91 aa2.49□□□□□ -2.01
CKAP4-203ENST00000553039 IGKV3D-7A0A0C4DH55 119 aa2.48□□□□□ -2.01
CKAP4-203ENST00000553039 HIST1H4AP62805 103 aaKnown RBP2.48□□□□□ -2.01
CKAP4-203ENST00000553039 Q96NJ1 140 aa2.48□□□□□ -2.01
CKAP4-203ENST00000553039 SS18L2Q9UHA2 77 aa2.48□□□□□ -2.01
CKAP4-203ENST00000553039 SPRR2EP22531 72 aa2.47□□□□□ -2.01
CKAP4-203ENST00000553039 SPRR2BP35325 72 aa2.47□□□□□ -2.01
CKAP4-203ENST00000553039 SPRR2AP35326 72 aa2.47□□□□□ -2.01
CKAP4-203ENST00000553039 FAM236AA0A1B0GUQ0 79 aa2.46□□□□□ -2.02
CKAP4-203ENST00000553039 FAM236BA0A1B0GV22 79 aa2.46□□□□□ -2.02
CKAP4-203ENST00000553039 K7ERS5 55 aa2.46□□□□□ -2.02
CKAP4-203ENST00000553039 J3KT08 172 aa2.45□□□□□ -2.02
CKAP4-203ENST00000553039 LCE1FQ5T754 118 aa2.45□□□□□ -2.02
CKAP4-203ENST00000553039 A0A087WVE0 104 aa2.44□□□□□ -2.02
CKAP4-203ENST00000553039 ATOX1O00244 68 aa2.44□□□□□ -2.02
CKAP4-203ENST00000553039 LINC00472Q9H8W2 130 aa2.44□□□□□ -2.02
CKAP4-203ENST00000553039 A8MUU9 505 aa2.43□□□□□ -2.02
CKAP4-203ENST00000553039 K7EQZ3 153 aa2.43□□□□□ -2.02
CKAP4-203ENST00000553039 NDUFB1O75438 58 aa2.43□□□□□ -2.02
CKAP4-203ENST00000553039 IGKV4-1P06312 121 aa2.43□□□□□ -2.02
CKAP4-203ENST00000553039 Q8N9L7 120 aa2.43□□□□□ -2.02
CKAP4-203ENST00000553039 SMIM20Q8N5G0 67 aa2.42□□□□□ -2.02
CKAP4-203ENST00000553039 SPRR2FQ96RM1 72 aa2.42□□□□□ -2.02
CKAP4-203ENST00000553039 HCG22E2RYF7 251 aa2.41□□□□□ -2.02
CKAP4-203ENST00000553039 PRR15Q8IV56 129 aa2.41□□□□□ -2.02
CKAP4-203ENST00000553039 GPR98Q8WXG9 6306 aa2.4□□□□□ -2.02
CKAP4-203ENST00000553039 MDN1Q9NU22 5596 aa2.4□□□□□ -2.02
CKAP4-203ENST00000553039 HRES1P13985 223 aa2.4□□□□□ -2.03
CKAP4-203ENST00000553039 SPRR2DP22532 72 aa2.4□□□□□ -2.03
CKAP4-203ENST00000553039 ADM2Q7Z4H4 148 aa2.4□□□□□ -2.03
CKAP4-203ENST00000553039 SERP2Q8N6R1 65 aa2.4□□□□□ -2.03
CKAP4-203ENST00000553039 KRTAP10-5P60370 271 aa2.39□□□□□ -2.03
CKAP4-203ENST00000553039 CASC2Q6XLA1 102 aa2.39□□□□□ -2.03
CKAP4-203ENST00000553039 WFDC13Q8IUB5 93 aa2.39□□□□□ -2.03
CKAP4-203ENST00000553039 TRAV7A0A075B6U4 112 aa2.38□□□□□ -2.03
CKAP4-203ENST00000553039 MMP24-AS1A0A0U1RRL7 71 aa2.38□□□□□ -2.03
CKAP4-203ENST00000553039 A8MUN3 132 aa2.38□□□□□ -2.03
CKAP4-203ENST00000553039 UQCRQO14949 82 aa2.38□□□□□ -2.03
CKAP4-203ENST00000553039 COX7CP15954 63 aa2.38□□□□□ -2.03
CKAP4-203ENST00000553039 Q5VV11 94 aa2.38□□□□□ -2.03
CKAP4-203ENST00000553039 KRTAP4-2Q9BYR5 136 aa2.38□□□□□ -2.03
CKAP4-203ENST00000553039 hDV103S1A0JD37 113 aa2.37□□□□□ -2.03
CKAP4-203ENST00000553039 A8MU10 97 aa2.37□□□□□ -2.03
CKAP4-203ENST00000553039 TMEM254Q8TBM7 123 aa2.36□□□□□ -2.03
CKAP4-203ENST00000553039 MRPL34Q9BQ48 92 aaKnown RBP2.36□□□□□ -2.03
CKAP4-203ENST00000553039 A6NED7 52 aa2.35□□□□□ -2.03
CKAP4-203ENST00000553039 CCDC179H3BU77 68 aa2.35□□□□□ -2.03
CKAP4-203ENST00000553039 TP53AIP1Q9HCN2 124 aa2.35□□□□□ -2.03
CKAP4-203ENST00000553039 C20orf197Q8N268 126 aa2.34□□□□□ -2.03
CKAP4-203ENST00000553039 TRAV22A0A0B4J277 110 aa2.33□□□□□ -2.04
CKAP4-203ENST00000553039 KLKP1Q107X0 134 aa2.33□□□□□ -2.04
CKAP4-203ENST00000553039 H0Y9P7 68 aa2.32□□□□□ -2.04
CKAP4-203ENST00000553039 H3BPC8 53 aa2.32□□□□□ -2.04
CKAP4-203ENST00000553039 NDUFC1O43677 76 aa2.32□□□□□ -2.04
CKAP4-203ENST00000553039 MT1BP07438 61 aa2.32□□□□□ -2.04
CKAP4-203ENST00000553039 SPINT4Q6UDR6 99 aa2.32□□□□□ -2.04
CKAP4-203ENST00000553039 A0A1B0GU33 70 aa2.31□□□□□ -2.04
CKAP4-203ENST00000553039 SPINK7P58062 85 aa2.31□□□□□ -2.04
CKAP4-203ENST00000553039 KRTAP8-1Q8IUC2 63 aa2.31□□□□□ -2.04
CKAP4-203ENST00000553039 SNURFQ9Y675 71 aa2.31□□□□□ -2.04
CKAP4-203ENST00000553039 KRTAP10-12P60413 245 aa2.3□□□□□ -2.04
CKAP4-203ENST00000553039 TMEM258P61165 79 aa2.3□□□□□ -2.04
CKAP4-203ENST00000553039 KRTAP19-8Q3LI54 63 aa2.3□□□□□ -2.04
CKAP4-203ENST00000553039 C1orf64Q8NEQ6 169 aa2.3□□□□□ -2.04
CKAP4-203ENST00000553039 LINC00208Q96KT6 92 aa2.3□□□□□ -2.04
CKAP4-203ENST00000553039 LOC101927531A0A1B0GV80 90 aa2.29□□□□□ -2.04
CKAP4-203ENST00000553039 H7BZZ5 65 aa2.29□□□□□ -2.04
CKAP4-203ENST00000553039 ZCCHC13Q8WW36 166 aaKnown RBP2.29□□□□□ -2.04
CKAP4-203ENST00000553039 CYSTM1Q9H1C7 97 aa2.29□□□□□ -2.04
CKAP4-203ENST00000553039 ATP5EP56381 51 aaPredicted RBP2.28□□□□□ -2.04
CKAP4-203ENST00000553039 H1FX-AS1Q4G0G2 97 aa2.28□□□□□ -2.04
CKAP4-203ENST00000553039 SPRR2GQ9BYE4 73 aa2.26□□□□□ -2.05
CKAP4-203ENST00000553039 KRTAP25-1Q3LHN0 102 aa2.25□□□□□ -2.05
CKAP4-203ENST00000553039 C7orf65Q6ZTY9 151 aa2.25□□□□□ -2.05
CKAP4-203ENST00000553039 CYP4F30PQ9H0H9 118 aa2.25□□□□□ -2.05
CKAP4-203ENST00000553039 PRO2289Q9P1D8 64 aa2.25□□□□□ -2.05
CKAP4-203ENST00000553039 LCA10Q71F78 164 aa2.24□□□□□ -2.05
CKAP4-203ENST00000553039 R4GN34 69 aa2.24□□□□□ -2.05
CKAP4-203ENST00000553039 LCE3CQ5T5A8 94 aa2.23□□□□□ -2.05
CKAP4-203ENST00000553039 KTN1-AS1Q86SY8 53 aa2.23□□□□□ -2.05
CKAP4-203ENST00000553039 SERP1Q9Y6X1 66 aa2.22□□□□□ -2.05
CKAP4-203ENST00000553039 RPS28P62857 69 aaKnown RBP2.21□□□□□ -2.06
CKAP4-203ENST00000553039 LINC01554Q52M75 96 aa2.2□□□□□ -2.06
CKAP4-203ENST00000553039 KRTAP5-10Q6L8G5 202 aa2.2□□□□□ -2.06
CKAP4-203ENST00000553039 DMAC1Q96GE9 116 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms