RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 MRPL34Q9BQ48 92 aaKnown RBP3.05□□□□□ -1.92
SCAF11-213ENST00000550629 IMUPQ9GZP8 106 aa3.04□□□□□ -1.92
SCAF11-213ENST00000550629 HIST1H4AP62805 103 aaKnown RBP3.03□□□□□ -1.92
SCAF11-213ENST00000550629 PCOTHQ58A44 107 aa3.02□□□□□ -1.93
SCAF11-213ENST00000550629 WFDC13Q8IUB5 93 aa3.02□□□□□ -1.93
SCAF11-213ENST00000550629 TP53AIP1Q9HCN2 124 aa3.02□□□□□ -1.93
SCAF11-213ENST00000550629 LPAP08519 4548 aa3.02□□□□□ -1.93
SCAF11-213ENST00000550629 ZCCHC13Q8WW36 166 aaKnown RBP3.01□□□□□ -1.93
SCAF11-213ENST00000550629 NDUFS5O43920 106 aa3□□□□□ -1.93
SCAF11-213ENST00000550629 KRTAP5-5Q701N2 237 aaPredicted RBP3□□□□□ -1.93
SCAF11-213ENST00000550629 MT-ATP8P03928 68 aa2.99□□□□□ -1.93
SCAF11-213ENST00000550629 A0A087WVE0 104 aa2.98□□□□□ -1.93
SCAF11-213ENST00000550629 UQCRQO14949 82 aa2.97□□□□□ -1.93
SCAF11-213ENST00000550629 RNF213Q63HN8 5207 aa2.97□□□□□ -1.93
SCAF11-213ENST00000550629 Q5W150 140 aa2.96□□□□□ -1.94
SCAF11-213ENST00000550629 SMIM20Q8N5G0 67 aa2.96□□□□□ -1.94
SCAF11-213ENST00000550629 KRTAP4-1Q9BYQ7 146 aa2.96□□□□□ -1.94
SCAF11-213ENST00000550629 TRAV22A0A0B4J277 110 aa2.95□□□□□ -1.94
SCAF11-213ENST00000550629 A0A0U1RQV1 116 aa2.95□□□□□ -1.94
SCAF11-213ENST00000550629 ATOX1O00244 68 aa2.95□□□□□ -1.94
SCAF11-213ENST00000550629 SCGB1A1P11684 91 aa2.95□□□□□ -1.94
SCAF11-213ENST00000550629 SPINK7P58062 85 aa2.95□□□□□ -1.94
SCAF11-213ENST00000550629 C7orf65Q6ZTY9 151 aa2.94□□□□□ -1.94
SCAF11-213ENST00000550629 MUC2Q02817 5179 aa2.94□□□□□ -1.94
SCAF11-213ENST00000550629 FAM236AA0A1B0GUQ0 79 aa2.93□□□□□ -1.94
SCAF11-213ENST00000550629 FAM236BA0A1B0GV22 79 aa2.93□□□□□ -1.94
SCAF11-213ENST00000550629 LOC101927531A0A1B0GV80 90 aa2.93□□□□□ -1.94
SCAF11-213ENST00000550629 C5orf47Q569G3 176 aa2.93□□□□□ -1.94
SCAF11-213ENST00000550629 H3BPC8 53 aa2.92□□□□□ -1.94
SCAF11-213ENST00000550629 MUC17Q685J3 4493 aa2.92□□□□□ -1.94
SCAF11-213ENST00000550629 TRAV7A0A075B6U4 112 aa2.91□□□□□ -1.94
SCAF11-213ENST00000550629 H0Y9P7 68 aa2.91□□□□□ -1.94
SCAF11-213ENST00000550629 HRES1P13985 223 aa2.91□□□□□ -1.94
SCAF11-213ENST00000550629 MP68P56378 58 aa2.91□□□□□ -1.94
SCAF11-213ENST00000550629 RBM12B-AS1Q9P1G2 102 aa2.91□□□□□ -1.94
SCAF11-213ENST00000550629 CYP4F30PQ9H0H9 118 aa2.9□□□□□ -1.95
SCAF11-213ENST00000550629 KRTAP19-2Q3LHN2 52 aa2.89□□□□□ -1.95
SCAF11-213ENST00000550629 C1orf64Q8NEQ6 169 aa2.89□□□□□ -1.95
SCAF11-213ENST00000550629 COX6B2Q6YFQ2 88 aa2.88□□□□□ -1.95
SCAF11-213ENST00000550629 SERP2Q8N6R1 65 aa2.88□□□□□ -1.95
SCAF11-213ENST00000550629 LCE1CQ5T751 118 aa2.87□□□□□ -1.95
SCAF11-213ENST00000550629 LCE1BQ5T7P3 118 aa2.87□□□□□ -1.95
SCAF11-213ENST00000550629 LINC00208Q96KT6 92 aa2.87□□□□□ -1.95
SCAF11-213ENST00000550629 FAM236DA0A1B0GTK5 79 aa2.86□□□□□ -1.95
SCAF11-213ENST00000550629 FAM236CP0DP71 79 aa2.86□□□□□ -1.95
SCAF11-213ENST00000550629 C4orf26Q17RF5 130 aa2.85□□□□□ -1.95
SCAF11-213ENST00000550629 FAT4Q6V0I7 4981 aa2.84□□□□□ -1.95
SCAF11-213ENST00000550629 H1FX-AS1Q4G0G2 97 aa2.84□□□□□ -1.95
SCAF11-213ENST00000550629 A8MUN3 132 aa2.83□□□□□ -1.96
SCAF11-213ENST00000550629 COX7CP15954 63 aa2.83□□□□□ -1.96
SCAF11-213ENST00000550629 MT1HP80294 61 aa2.83□□□□□ -1.96
SCAF11-213ENST00000550629 KLKP1Q107X0 134 aa2.82□□□□□ -1.96
SCAF11-213ENST00000550629 ANAPC13Q9BS18 74 aa2.82□□□□□ -1.96
SCAF11-213ENST00000550629 C20orf197Q8N268 126 aa2.81□□□□□ -1.96
SCAF11-213ENST00000550629 NDUFC1O43677 76 aa2.8□□□□□ -1.96
SCAF11-213ENST00000550629 M0R2T5 61 aa2.79□□□□□ -1.96
SCAF11-213ENST00000550629 SPANXA2-OT1Q8N9U9 137 aa2.79□□□□□ -1.96
SCAF11-213ENST00000550629 DMAC1Q96GE9 116 aa2.79□□□□□ -1.96
SCAF11-213ENST00000550629 SNURFQ9Y675 71 aa2.79□□□□□ -1.96
SCAF11-213ENST00000550629 S4R3F8 94 aa2.77□□□□□ -1.97
SCAF11-213ENST00000550629 FLGP20930 4061 aaPredicted RBP2.76□□□□□ -1.97
SCAF11-213ENST00000550629 LCA10Q71F78 164 aa2.75□□□□□ -1.97
SCAF11-213ENST00000550629 H7BZZ5 65 aa2.74□□□□□ -1.97
SCAF11-213ENST00000550629 ACYP2P14621 99 aa2.74□□□□□ -1.97
SCAF11-213ENST00000550629 CSAG1Q6PB30 78 aa2.74□□□□□ -1.97
SCAF11-213ENST00000550629 CCDC179H3BU77 68 aa2.73□□□□□ -1.97
SCAF11-213ENST00000550629 CYSTM1Q9H1C7 97 aa2.72□□□□□ -1.97
SCAF11-213ENST00000550629 ATP5EP56381 51 aaPredicted RBP2.71□□□□□ -1.98
SCAF11-213ENST00000550629 SPTSSBQ8NFR3 76 aa2.71□□□□□ -1.98
SCAF11-213ENST00000550629 H0YAA0 97 aa2.69□□□□□ -1.98
SCAF11-213ENST00000550629 CHKB-CPT1BH3BT56 60 aa2.69□□□□□ -1.98
SCAF11-213ENST00000550629 MT2AP02795 61 aa2.69□□□□□ -1.98
SCAF11-213ENST00000550629 TMEM258P61165 79 aa2.69□□□□□ -1.98
SCAF11-213ENST00000550629 COA5Q86WW8 74 aa2.67□□□□□ -1.98
SCAF11-213ENST00000550629 KRTAP10-10P60014 251 aa2.66□□□□□ -1.98
SCAF11-213ENST00000550629 MT1FP04733 61 aa2.65□□□□□ -1.99
SCAF11-213ENST00000550629 LCE3DQ9BYE3 92 aa2.65□□□□□ -1.99
SCAF11-213ENST00000550629 CRIPTQ9P021 101 aa2.64□□□□□ -1.99
SCAF11-213ENST00000550629 ADM2Q7Z4H4 148 aa2.61□□□□□ -1.99
SCAF11-213ENST00000550629 SERP1Q9Y6X1 66 aa2.6□□□□□ -1.99
SCAF11-213ENST00000550629 SPRR2GQ9BYE4 73 aa2.59□□□□□ -1.99
SCAF11-213ENST00000550629 SEC61GP60059 68 aa2.58□□□□□ -2
SCAF11-213ENST00000550629 P0C880 135 aa2.57□□□□□ -2
SCAF11-213ENST00000550629 PP632Q6XCG6 107 aa2.57□□□□□ -2
SCAF11-213ENST00000550629 M0QZ58 72 aa2.55□□□□□ -2
SCAF11-213ENST00000550629 RPS28P62857 69 aaKnown RBP2.55□□□□□ -2
SCAF11-213ENST00000550629 R4GN34 69 aa2.55□□□□□ -2
SCAF11-213ENST00000550629 A0A1B0GU69 56 aa2.54□□□□□ -2
SCAF11-213ENST00000550629 KRTAP19-8Q3LI54 63 aa2.54□□□□□ -2
SCAF11-213ENST00000550629 PRR15LQ9BU68 103 aa2.54□□□□□ -2
SCAF11-213ENST00000550629 LINC01558Q9Y6Z2 57 aa2.53□□□□□ -2
SCAF11-213ENST00000550629 Q5VV11 94 aa2.52□□□□□ -2.01
SCAF11-213ENST00000550629 V9GYY9 64 aa2.52□□□□□ -2.01
SCAF11-213ENST00000550629 SMIM26A0A096LP01 95 aa2.51□□□□□ -2.01
SCAF11-213ENST00000550629 A0A1B0GU33 70 aa2.5□□□□□ -2.01
SCAF11-213ENST00000550629 Q1T7F1 81 aa2.5□□□□□ -2.01
SCAF11-213ENST00000550629 USH2AO75445 5202 aa2.5□□□□□ -2.01
SCAF11-213ENST00000550629 MUC19Q7Z5P9 8384 aa2.49□□□□□ -2.01
SCAF11-213ENST00000550629 A6NN06 94 aa2.49□□□□□ -2.01
SCAF11-213ENST00000550629 MT1BP07438 61 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms