RNA–Protein interactions for RNA: ENST00000550587.5

DEPDC4-209, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,165 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-209ENST00000550587 KRTAP13-3Q3SY46 172 aa3.34□□□□□ -1.87
DEPDC4-209ENST00000550587 ANAPC13Q9BS18 74 aa3.34□□□□□ -1.87
DEPDC4-209ENST00000550587 UQCRQO14949 82 aa3.33□□□□□ -1.88
DEPDC4-209ENST00000550587 C5orf47Q569G3 176 aa3.33□□□□□ -1.88
DEPDC4-209ENST00000550587 C20orf166-AS1Q96NR2 134 aa3.33□□□□□ -1.88
DEPDC4-209ENST00000550587 A8MUU9 505 aa3.32□□□□□ -1.88
DEPDC4-209ENST00000550587 NDUFS5O43920 106 aa3.32□□□□□ -1.88
DEPDC4-209ENST00000550587 COX7CP15954 63 aa3.32□□□□□ -1.88
DEPDC4-209ENST00000550587 Q75L30 129 aa3.31□□□□□ -1.88
DEPDC4-209ENST00000550587 TRAV22A0A0B4J277 110 aa3.29□□□□□ -1.88
DEPDC4-209ENST00000550587 H3BPC8 53 aa3.29□□□□□ -1.88
DEPDC4-209ENST00000550587 MP68P56378 58 aa3.29□□□□□ -1.88
DEPDC4-209ENST00000550587 Q5W150 140 aa3.29□□□□□ -1.88
DEPDC4-209ENST00000550587 H0Y9P7 68 aa3.28□□□□□ -1.88
DEPDC4-209ENST00000550587 ZCCHC13Q8WW36 166 aaKnown RBP3.28□□□□□ -1.88
DEPDC4-209ENST00000550587 KRTAP9-6A8MVA2 160 aa3.27□□□□□ -1.89
DEPDC4-209ENST00000550587 CCDC179H3BU77 68 aa3.27□□□□□ -1.89
DEPDC4-209ENST00000550587 RPL37P61927 97 aaKnown RBP3.27□□□□□ -1.89
DEPDC4-209ENST00000550587 C20orf197Q8N268 126 aa3.27□□□□□ -1.89
DEPDC4-209ENST00000550587 A0A0A0MQY5 61 aa3.26□□□□□ -1.89
DEPDC4-209ENST00000550587 KLKP1Q107X0 134 aa3.26□□□□□ -1.89
DEPDC4-209ENST00000550587 ATP11AUNQ6ZP68 121 aa3.26□□□□□ -1.89
DEPDC4-209ENST00000550587 C1orf64Q8NEQ6 169 aa3.26□□□□□ -1.89
DEPDC4-209ENST00000550587 LINC00208Q96KT6 92 aa3.26□□□□□ -1.89
DEPDC4-209ENST00000550587 LOC101927531A0A1B0GV80 90 aa3.24□□□□□ -1.89
DEPDC4-209ENST00000550587 M0R2T5 61 aa3.24□□□□□ -1.89
DEPDC4-209ENST00000550587 CYP4F30PQ9H0H9 118 aa3.24□□□□□ -1.89
DEPDC4-209ENST00000550587 SNURFQ9Y675 71 aa3.24□□□□□ -1.89
DEPDC4-209ENST00000550587 NDUFC1O43677 76 aa3.23□□□□□ -1.89
DEPDC4-209ENST00000550587 KRTAP10-12P60413 245 aa3.23□□□□□ -1.89
DEPDC4-209ENST00000550587 KRTAP4-1Q9BYQ7 146 aa3.23□□□□□ -1.89
DEPDC4-209ENST00000550587 PCOTHQ58A44 107 aa3.22□□□□□ -1.89
DEPDC4-209ENST00000550587 COX6B2Q6YFQ2 88 aa3.22□□□□□ -1.89
DEPDC4-209ENST00000550587 LCE1FQ5T754 118 aa3.21□□□□□ -1.9
DEPDC4-209ENST00000550587 CYSTM1Q9H1C7 97 aa3.21□□□□□ -1.9
DEPDC4-209ENST00000550587 H7BZZ5 65 aa3.2□□□□□ -1.9
DEPDC4-209ENST00000550587 SPINK7P58062 85 aa3.2□□□□□ -1.9
DEPDC4-209ENST00000550587 C7orf65Q6ZTY9 151 aa3.2□□□□□ -1.9
DEPDC4-209ENST00000550587 MUC17Q685J3 4493 aa3.2□□□□□ -1.9
DEPDC4-209ENST00000550587 MT1HP80294 61 aa3.19□□□□□ -1.9
DEPDC4-209ENST00000550587 SPANXA2-OT1Q8N9U9 137 aa3.17□□□□□ -1.9
DEPDC4-209ENST00000550587 HRES1P13985 223 aa3.16□□□□□ -1.9
DEPDC4-209ENST00000550587 TMEM258P61165 79 aa3.16□□□□□ -1.9
DEPDC4-209ENST00000550587 SYNE2Q8WXH0 6885 aaKnown RBP3.14□□□□□ -1.91
DEPDC4-209ENST00000550587 ATP5EP56381 51 aaPredicted RBP3.14□□□□□ -1.91
DEPDC4-209ENST00000550587 KRTAP19-2Q3LHN2 52 aa3.14□□□□□ -1.91
DEPDC4-209ENST00000550587 C4orf26Q17RF5 130 aa3.13□□□□□ -1.91
DEPDC4-209ENST00000550587 FAM236DA0A1B0GTK5 79 aa3.12□□□□□ -1.91
DEPDC4-209ENST00000550587 FAM236CP0DP71 79 aa3.12□□□□□ -1.91
DEPDC4-209ENST00000550587 SSPOA2VEC9 5147 aa3.11□□□□□ -1.91
DEPDC4-209ENST00000550587 A8MUN3 132 aa3.11□□□□□ -1.91
DEPDC4-209ENST00000550587 DMAC1Q96GE9 116 aa3.11□□□□□ -1.91
DEPDC4-209ENST00000550587 ACYP2P14621 99 aa3.1□□□□□ -1.91
DEPDC4-209ENST00000550587 RBM12B-AS1Q9P1G2 102 aa3.1□□□□□ -1.91
DEPDC4-209ENST00000550587 MACF1Q9UPN3 7388 aaKnown RBP3.09□□□□□ -1.91
DEPDC4-209ENST00000550587 RPS28P62857 69 aaKnown RBP3.07□□□□□ -1.92
DEPDC4-209ENST00000550587 SERP1Q9Y6X1 66 aa3.07□□□□□ -1.92
DEPDC4-209ENST00000550587 H1FX-AS1Q4G0G2 97 aa3.06□□□□□ -1.92
DEPDC4-209ENST00000550587 LCE3CQ5T5A8 94 aa3.05□□□□□ -1.92
DEPDC4-209ENST00000550587 COA5Q86WW8 74 aa3.05□□□□□ -1.92
DEPDC4-209ENST00000550587 FLGP20930 4061 aaPredicted RBP3.04□□□□□ -1.92
DEPDC4-209ENST00000550587 OBSCNQ5VST9 7968 aa3.03□□□□□ -1.92
DEPDC4-209ENST00000550587 CHKB-CPT1BH3BT56 60 aa3.02□□□□□ -1.93
DEPDC4-209ENST00000550587 NEBP20929 6669 aa3.02□□□□□ -1.93
DEPDC4-209ENST00000550587 FCGBPQ9Y6R7 5405 aaPredicted RBP3.02□□□□□ -1.93
DEPDC4-209ENST00000550587 KRTAP4-3Q9BYR4 195 aa3.01□□□□□ -1.93
DEPDC4-209ENST00000550587 S4R3F8 94 aa3.01□□□□□ -1.93
DEPDC4-209ENST00000550587 USH2AO75445 5202 aa3.01□□□□□ -1.93
DEPDC4-209ENST00000550587 LCA10Q71F78 164 aa3□□□□□ -1.93
DEPDC4-209ENST00000550587 SPTSSBQ8NFR3 76 aa3□□□□□ -1.93
DEPDC4-209ENST00000550587 SMIM26A0A096LP01 95 aa2.99□□□□□ -1.93
DEPDC4-209ENST00000550587 KRTAP20-1Q3LI63 56 aa2.98□□□□□ -1.93
DEPDC4-209ENST00000550587 CSAG1Q6PB30 78 aa2.98□□□□□ -1.93
DEPDC4-209ENST00000550587 KRTAP10-10P60014 251 aa2.97□□□□□ -1.93
DEPDC4-209ENST00000550587 KRTAP5-2Q701N4 177 aa2.97□□□□□ -1.93
DEPDC4-209ENST00000550587 Q1T7F1 81 aa2.95□□□□□ -1.94
DEPDC4-209ENST00000550587 KRTAP6-3Q3LI67 103 aa2.95□□□□□ -1.94
DEPDC4-209ENST00000550587 V9GYY9 64 aa2.95□□□□□ -1.94
DEPDC4-209ENST00000550587 MT2AP02795 61 aa2.93□□□□□ -1.94
DEPDC4-209ENST00000550587 LINC01558Q9Y6Z2 57 aa2.93□□□□□ -1.94
DEPDC4-209ENST00000550587 H0YAA0 97 aa2.91□□□□□ -1.94
DEPDC4-209ENST00000550587 SEC61GP60059 68 aa2.91□□□□□ -1.94
DEPDC4-209ENST00000550587 MT1FP04733 61 aa2.9□□□□□ -1.95
DEPDC4-209ENST00000550587 A0A1B0GU69 56 aa2.89□□□□□ -1.95
DEPDC4-209ENST00000550587 PRR15LQ9BU68 103 aa2.89□□□□□ -1.95
DEPDC4-209ENST00000550587 PSPHP1O15172 72 aa2.87□□□□□ -1.95
DEPDC4-209ENST00000550587 ADM2Q7Z4H4 148 aa2.86□□□□□ -1.95
DEPDC4-209ENST00000550587 KRTAP19-6Q3LI70 58 aa2.85□□□□□ -1.95
DEPDC4-209ENST00000550587 P0C880 135 aa2.84□□□□□ -1.95
DEPDC4-209ENST00000550587 Q5VV11 94 aa2.84□□□□□ -1.95
DEPDC4-209ENST00000550587 A0A1B0GU33 70 aa2.83□□□□□ -1.96
DEPDC4-209ENST00000550587 GPR98Q8WXG9 6306 aa2.81□□□□□ -1.96
DEPDC4-209ENST00000550587 UQCR11O14957 56 aa2.81□□□□□ -1.96
DEPDC4-209ENST00000550587 CRIPTQ9P021 101 aa2.81□□□□□ -1.96
DEPDC4-209ENST00000550587 M0QZ58 72 aa2.8□□□□□ -1.96
DEPDC4-209ENST00000550587 LCE3EQ5T5B0 92 aa2.79□□□□□ -1.96
DEPDC4-209ENST00000550587 A6NED7 52 aa2.78□□□□□ -1.96
DEPDC4-209ENST00000550587 SPATA8Q6RVD6 105 aa2.78□□□□□ -1.96
DEPDC4-209ENST00000550587 R4GN34 69 aa2.78□□□□□ -1.96
DEPDC4-209ENST00000550587 KRTAP2-3P0C7H8 128 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms