RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

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Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 IGKV2-24A0A0C4DH68 120 aa2.48□□□□□ -2.01
SCAF11-212ENST00000549162 NPC2P61916 151 aa2.48□□□□□ -2.01
SCAF11-212ENST00000549162 Q1T7F1 81 aa2.48□□□□□ -2.01
SCAF11-212ENST00000549162 CASC2Q6XLA1 102 aa2.48□□□□□ -2.01
SCAF11-212ENST00000549162 KRTAP19-8Q3LI54 63 aa2.47□□□□□ -2.01
SCAF11-212ENST00000549162 C7orf65Q6ZTY9 151 aa2.47□□□□□ -2.01
SCAF11-212ENST00000549162 A0A087WSZ3 146 aa2.47□□□□□ -2.01
SCAF11-212ENST00000549162 KRTAP4-5Q9BYR2 181 aa2.47□□□□□ -2.01
SCAF11-212ENST00000549162 DPH3Q96FX2 82 aa2.46□□□□□ -2.02
SCAF11-212ENST00000549162 COX6B2Q6YFQ2 88 aa2.46□□□□□ -2.02
SCAF11-212ENST00000549162 KRTAP9-3Q9BYQ3 159 aa2.45□□□□□ -2.02
SCAF11-212ENST00000549162 WNK1Q9H4A3 2382 aa2.44□□□□□ -2.02
SCAF11-212ENST00000549162 FAT4Q6V0I7 4981 aa2.44□□□□□ -2.02
SCAF11-212ENST00000549162 KRTAP25-1Q3LHN0 102 aa2.44□□□□□ -2.02
SCAF11-212ENST00000549162 SPRR2GQ9BYE4 73 aa2.44□□□□□ -2.02
SCAF11-212ENST00000549162 SERP1Q9Y6X1 66 aa2.44□□□□□ -2.02
SCAF11-212ENST00000549162 A0A0G2JQZ4 141 aa2.43□□□□□ -2.02
SCAF11-212ENST00000549162 MGAM2Q2M2H8 2515 aa2.43□□□□□ -2.02
SCAF11-212ENST00000549162 FLG2Q5D862 2391 aaPredicted RBP2.43□□□□□ -2.02
SCAF11-212ENST00000549162 RETNLBQ9BQ08 111 aa2.42□□□□□ -2.02
SCAF11-212ENST00000549162 A0A1B0GU33 70 aa2.42□□□□□ -2.02
SCAF11-212ENST00000549162 LINC01558Q9Y6Z2 57 aa2.42□□□□□ -2.02
SCAF11-212ENST00000549162 H1FX-AS1Q4G0G2 97 aa2.41□□□□□ -2.02
SCAF11-212ENST00000549162 Q5VV11 94 aa2.4□□□□□ -2.03
SCAF11-212ENST00000549162 C9orf153Q5TBE3 101 aa2.4□□□□□ -2.03
SCAF11-212ENST00000549162 STAB2Q8WWQ8 2551 aa2.4□□□□□ -2.03
SCAF11-212ENST00000549162 CYSTM1Q9H1C7 97 aa2.39□□□□□ -2.03
SCAF11-212ENST00000549162 KRTAP4-1Q9BYQ7 146 aa2.39□□□□□ -2.03
SCAF11-212ENST00000549162 ROMO1P60602 79 aa2.39□□□□□ -2.03
SCAF11-212ENST00000549162 R4GN34 69 aa2.37□□□□□ -2.03
SCAF11-212ENST00000549162 KRTAP9-8Q9BYQ0 159 aa2.37□□□□□ -2.03
SCAF11-212ENST00000549162 H0Y9P7 68 aa2.37□□□□□ -2.03
SCAF11-212ENST00000549162 KRTAP12-2P59991 146 aa2.36□□□□□ -2.03
SCAF11-212ENST00000549162 MT1HP80294 61 aa2.36□□□□□ -2.03
SCAF11-212ENST00000549162 ACYP2P14621 99 aa2.35□□□□□ -2.03
SCAF11-212ENST00000549162 SPTSSBQ8NFR3 76 aa2.35□□□□□ -2.03
SCAF11-212ENST00000549162 KRTAP4-12Q9BQ66 201 aa2.35□□□□□ -2.03
SCAF11-212ENST00000549162 SPINT4Q6UDR6 99 aa2.34□□□□□ -2.04
SCAF11-212ENST00000549162 LCE1AQ5T7P2 110 aa2.33□□□□□ -2.04
SCAF11-212ENST00000549162 LOC100996750A0A140TA64 210 aa2.32□□□□□ -2.04
SCAF11-212ENST00000549162 KRTAP10-6P60371 365 aaPredicted RBP2.32□□□□□ -2.04
SCAF11-212ENST00000549162 DEFB105AQ8NG35 78 aa2.32□□□□□ -2.04
SCAF11-212ENST00000549162 KRTAP4-6Q9BYQ5 205 aa2.32□□□□□ -2.04
SCAF11-212ENST00000549162 ATP11AUNQ6ZP68 121 aa2.31□□□□□ -2.04
SCAF11-212ENST00000549162 P0C880 135 aa2.31□□□□□ -2.04
SCAF11-212ENST00000549162 M0QZ58 72 aa2.3□□□□□ -2.04
SCAF11-212ENST00000549162 KRTAP9-2Q9BYQ4 174 aa2.3□□□□□ -2.04
SCAF11-212ENST00000549162 SPINK7P58062 85 aa2.3□□□□□ -2.04
SCAF11-212ENST00000549162 C20orf197Q8N268 126 aa2.3□□□□□ -2.04
SCAF11-212ENST00000549162 SPATA8Q6RVD6 105 aa2.29□□□□□ -2.04
SCAF11-212ENST00000549162 A0A087WVE0 104 aa2.29□□□□□ -2.04
SCAF11-212ENST00000549162 HAMPP81172 84 aa2.28□□□□□ -2.04
SCAF11-212ENST00000549162 KRTAP19-6Q3LI70 58 aa2.28□□□□□ -2.04
SCAF11-212ENST00000549162 Q8N9L7 120 aa2.28□□□□□ -2.04
SCAF11-212ENST00000549162 LCE1FQ5T754 118 aa2.27□□□□□ -2.05
SCAF11-212ENST00000549162 SMR3BP02814 79 aaPredicted RBP2.25□□□□□ -2.05
SCAF11-212ENST00000549162 MIR22HGQ0VDD5 57 aa2.25□□□□□ -2.05
SCAF11-212ENST00000549162 MT3P25713 68 aa2.25□□□□□ -2.05
SCAF11-212ENST00000549162 LINC00208Q96KT6 92 aa2.24□□□□□ -2.05
SCAF11-212ENST00000549162 PRO2289Q9P1D8 64 aa2.24□□□□□ -2.05
SCAF11-212ENST00000549162 UBR4Q5T4S7 5183 aa2.24□□□□□ -2.05
SCAF11-212ENST00000549162 MT2AP02795 61 aa2.23□□□□□ -2.05
SCAF11-212ENST00000549162 COA5Q86WW8 74 aa2.23□□□□□ -2.05
SCAF11-212ENST00000549162 S4R3F8 94 aa2.23□□□□□ -2.05
SCAF11-212ENST00000549162 C9orf92A6NGG3 77 aa2.22□□□□□ -2.05
SCAF11-212ENST00000549162 KRTAP4-8Q9BYQ9 185 aa2.22□□□□□ -2.05
SCAF11-212ENST00000549162 PCOTHQ58A44 107 aa2.21□□□□□ -2.06
SCAF11-212ENST00000549162 KRTAP10-12P60413 245 aa2.21□□□□□ -2.06
SCAF11-212ENST00000549162 C10orf95Q9H7T3 257 aa2.19□□□□□ -2.06
SCAF11-212ENST00000549162 MT1BP07438 61 aa2.19□□□□□ -2.06
SCAF11-212ENST00000549162 RNF213Q63HN8 5207 aa2.18□□□□□ -2.06
SCAF11-212ENST00000549162 KRTAP10-5P60370 271 aa2.18□□□□□ -2.06
SCAF11-212ENST00000549162 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.17□□□□□ -2.06
SCAF11-212ENST00000549162 PRR15LQ9BU68 103 aa2.17□□□□□ -2.06
SCAF11-212ENST00000549162 CDC42SE1Q9NRR8 79 aa2.17□□□□□ -2.06
SCAF11-212ENST00000549162 CSAG1Q6PB30 78 aa2.16□□□□□ -2.06
SCAF11-212ENST00000549162 KRTAP2-2Q9BYT5 123 aa2.16□□□□□ -2.06
SCAF11-212ENST00000549162 SRRM2Q9UQ35 2752 aaKnown RBP2.16□□□□□ -2.06
SCAF11-212ENST00000549162 MT1FP04733 61 aa2.15□□□□□ -2.06
SCAF11-212ENST00000549162 LCE3BQ5TA77 95 aa2.15□□□□□ -2.07
SCAF11-212ENST00000549162 KRTAP5-9P26371 169 aa2.14□□□□□ -2.07
SCAF11-212ENST00000549162 CRCT1Q9UGL9 99 aa2.14□□□□□ -2.07
SCAF11-212ENST00000549162 USH2AO75445 5202 aa2.12□□□□□ -2.07
SCAF11-212ENST00000549162 DMBT1Q9UGM3 2413 aaPredicted RBP2.1□□□□□ -2.07
SCAF11-212ENST00000549162 A8MU10 97 aa2.1□□□□□ -2.07
SCAF11-212ENST00000549162 LCE3CQ5T5A8 94 aa2.1□□□□□ -2.07
SCAF11-212ENST00000549162 KRTAP12-1P59990 96 aa2.09□□□□□ -2.08
SCAF11-212ENST00000549162 MT1XP80297 61 aa2.08□□□□□ -2.08
SCAF11-212ENST00000549162 SPRR5A0A1B0GTR4 108 aa2.07□□□□□ -2.08
SCAF11-212ENST00000549162 SNURFQ9Y675 71 aa2.07□□□□□ -2.08
SCAF11-212ENST00000549162 PP632Q6XCG6 107 aa2.07□□□□□ -2.08
SCAF11-212ENST00000549162 KRTAP10-10P60014 251 aa2.06□□□□□ -2.08
SCAF11-212ENST00000549162 KRTAP8-1Q8IUC2 63 aa2.06□□□□□ -2.08
SCAF11-212ENST00000549162 UQCR11O14957 56 aa2.06□□□□□ -2.08
SCAF11-212ENST00000549162 SSPOA2VEC9 5147 aa2.05□□□□□ -2.08
SCAF11-212ENST00000549162 KRTAP13-4Q3LI77 160 aa2.05□□□□□ -2.08
SCAF11-212ENST00000549162 GPR98Q8WXG9 6306 aa2.04□□□□□ -2.08
SCAF11-212ENST00000549162 LCE1DQ5T752 114 aa2.01□□□□□ -2.09
SCAF11-212ENST00000549162 A0A1B0GU69 56 aa2□□□□□ -2.09
SCAF11-212ENST00000549162 MUC2Q02817 5179 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms