RNA–Protein interactions for RNA: ENST00000542717.1

CHD4-209, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 204 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-209ENST00000542717 A6NJY4 79 aa1.16□□□□□ -2.22
CHD4-209ENST00000542717 C9JAW5 83 aa1.16□□□□□ -2.22
CHD4-209ENST00000542717 KRTAP5-2Q701N4 177 aa1.16□□□□□ -2.22
CHD4-209ENST00000542717 C1orf64Q8NEQ6 169 aa1.16□□□□□ -2.22
CHD4-209ENST00000542717 KRTAP3-3Q9BYR6 98 aa1.16□□□□□ -2.22
CHD4-209ENST00000542717 PRO1854Q9UHT4 67 aa1.16□□□□□ -2.22
CHD4-209ENST00000542717 A0A1B0GW54 56 aa1.15□□□□□ -2.23
CHD4-209ENST00000542717 DLEU1O43261 78 aa1.15□□□□□ -2.23
CHD4-209ENST00000542717 COX8AP10176 69 aa1.15□□□□□ -2.23
CHD4-209ENST00000542717 S100A1P23297 94 aa1.15□□□□□ -2.23
CHD4-209ENST00000542717 HIST3H2BBQ8N257 126 aa1.15□□□□□ -2.23
CHD4-209ENST00000542717 COX6CP09669 75 aa1.14□□□□□ -2.23
CHD4-209ENST00000542717 PSMB2P49721 201 aa1.14□□□□□ -2.23
CHD4-209ENST00000542717 CEND1Q8N111 149 aa1.14□□□□□ -2.23
CHD4-209ENST00000542717 HIGD1BQ9P298 99 aa1.14□□□□□ -2.23
CHD4-209ENST00000542717 HCG22E2RYF7 251 aa1.13□□□□□ -2.23
CHD4-209ENST00000542717 NREPQ16612 68 aa1.13□□□□□ -2.23
CHD4-209ENST00000542717 OBSCNQ5VST9 7968 aa1.12□□□□□ -2.23
CHD4-209ENST00000542717 LOC110117498A0A087WWA1 95 aa1.12□□□□□ -2.23
CHD4-209ENST00000542717 JMJD7-PLA2G4BH0Y9G9 81 aa1.12□□□□□ -2.23
CHD4-209ENST00000542717 S100A6P06703 90 aa1.12□□□□□ -2.23
CHD4-209ENST00000542717 BAALC-AS2P0C853 105 aa1.12□□□□□ -2.23
CHD4-209ENST00000542717 FXYD2P54710 66 aa1.12□□□□□ -2.23
CHD4-209ENST00000542717 CXCL6P80162 114 aa1.12□□□□□ -2.23
CHD4-209ENST00000542717 LINC01554Q52M75 96 aa1.12□□□□□ -2.23
CHD4-209ENST00000542717 C14orf144Q96I85 54 aa1.12□□□□□ -2.23
CHD4-209ENST00000542717 HIST1H2BLQ99880 126 aa1.12□□□□□ -2.23
CHD4-209ENST00000542717 A0A087WVE0 104 aa1.11□□□□□ -2.23
CHD4-209ENST00000542717 K7ERJ3 54 aa1.11□□□□□ -2.23
CHD4-209ENST00000542717 S100A2P29034 98 aa1.11□□□□□ -2.23
CHD4-209ENST00000542717 CASC2Q6XLA1 102 aa1.11□□□□□ -2.23
CHD4-209ENST00000542717 ADM2Q7Z4H4 148 aa1.11□□□□□ -2.23
CHD4-209ENST00000542717 KRTAP4-2Q9BYR5 136 aa1.11□□□□□ -2.23
CHD4-209ENST00000542717 PAM16Q9Y3D7 125 aa1.11□□□□□ -2.23
CHD4-209ENST00000542717 R4GN34 69 aa1.11□□□□□ -2.23
CHD4-209ENST00000542717 BPY2O14599 106 aa1.1□□□□□ -2.23
CHD4-209ENST00000542717 SCGB1C2P0DMR2 95 aa1.1□□□□□ -2.23
CHD4-209ENST00000542717 M0QZ58 72 aa1.09□□□□□ -2.23
CHD4-209ENST00000542717 NDUFC1O43677 76 aa1.09□□□□□ -2.23
CHD4-209ENST00000542717 SPATA45Q537H7 98 aa1.09□□□□□ -2.23
CHD4-209ENST00000542717 VAMP8Q9BV40 100 aa1.09□□□□□ -2.23
CHD4-209ENST00000542717 C14orf132Q9NPU4 83 aa1.09□□□□□ -2.23
CHD4-209ENST00000542717 HSD52Q0P140 79 aa1.08□□□□□ -2.24
CHD4-209ENST00000542717 ATXN8Q156A1 80 aa1.08□□□□□ -2.24
CHD4-209ENST00000542717 KRTAP19-5Q3LI72 72 aa1.08□□□□□ -2.24
CHD4-209ENST00000542717 Q8N9L7 120 aa1.08□□□□□ -2.24
CHD4-209ENST00000542717 MT1LQ93083 61 aa1.08□□□□□ -2.24
CHD4-209ENST00000542717 KRTAP5-5Q701N2 237 aaPredicted RBP1.07□□□□□ -2.24
CHD4-209ENST00000542717 C20orf197Q8N268 126 aa1.07□□□□□ -2.24
CHD4-209ENST00000542717 NAA38Q9BRA0 125 aaKnown RBP1.07□□□□□ -2.24
CHD4-209ENST00000542717 CYP4F30PQ9H0H9 118 aa1.07□□□□□ -2.24
CHD4-209ENST00000542717 TP53AIP1Q9HCN2 124 aa1.07□□□□□ -2.24
CHD4-209ENST00000542717 P0C880 135 aa1.06□□□□□ -2.24
CHD4-209ENST00000542717 BATFQ16520 125 aa1.06□□□□□ -2.24
CHD4-209ENST00000542717 K7EP34 96 aa1.05□□□□□ -2.24
CHD4-209ENST00000542717 M0R143 59 aa1.05□□□□□ -2.24
CHD4-209ENST00000542717 TSTD3H0UI37 97 aa1.04□□□□□ -2.24
CHD4-209ENST00000542717 ACYP1P07311 99 aa1.04□□□□□ -2.24
CHD4-209ENST00000542717 SMIM6P0DI80 62 aa1.04□□□□□ -2.24
CHD4-209ENST00000542717 UQCR10Q9UDW1 63 aa1.04□□□□□ -2.24
CHD4-209ENST00000542717 TRAV22A0A0B4J277 110 aa1.03□□□□□ -2.24
CHD4-209ENST00000542717 LOC101927531A0A1B0GV80 90 aa1.03□□□□□ -2.24
CHD4-209ENST00000542717 A0A1W2PPM0 123 aa1.03□□□□□ -2.24
CHD4-209ENST00000542717 KRTAP5-1Q6L8H4 278 aa1.03□□□□□ -2.24
CHD4-209ENST00000542717 KRTAP3-2Q9BYR7 98 aa1.03□□□□□ -2.24
CHD4-209ENST00000542717 MT-ATP8P03928 68 aa1.02□□□□□ -2.25
CHD4-209ENST00000542717 KRTAP9-4Q9BYQ2 154 aa1.02□□□□□ -2.25
CHD4-209ENST00000542717 C10orf95Q9H7T3 257 aa1.02□□□□□ -2.25
CHD4-209ENST00000542717 A0A0D9SG42 100 aa1.01□□□□□ -2.25
CHD4-209ENST00000542717 H3BT86 120 aa1.01□□□□□ -2.25
CHD4-209ENST00000542717 PYY3Q5JQD4 70 aa1.01□□□□□ -2.25
CHD4-209ENST00000542717 UBL5Q9BZL1 73 aa1.01□□□□□ -2.25
CHD4-209ENST00000542717 TMA7Q9Y2S6 64 aaKnown RBP1.01□□□□□ -2.25
CHD4-209ENST00000542717 PHGR1C9JFL3 82 aa0.99□□□□□ -2.25
CHD4-209ENST00000542717 ATOX1O00244 68 aa0.99□□□□□ -2.25
CHD4-209ENST00000542717 COL5A1-AS1Q5SY13 56 aa0.99□□□□□ -2.25
CHD4-209ENST00000542717 CAMK2N1Q7Z7J9 78 aa0.99□□□□□ -2.25
CHD4-209ENST00000542717 SPCS1Q9Y6A9 102 aa0.99□□□□□ -2.25
CHD4-209ENST00000542717 H0Y9P7 68 aa0.98□□□□□ -2.25
CHD4-209ENST00000542717 UQCRQO14949 82 aa0.98□□□□□ -2.25
CHD4-209ENST00000542717 KRTAP6-2Q3LI66 62 aa0.98□□□□□ -2.25
CHD4-209ENST00000542717 LCE3AQ5TA76 89 aa0.98□□□□□ -2.25
CHD4-209ENST00000542717 GTF2H5Q6ZYL4 71 aa0.98□□□□□ -2.25
CHD4-209ENST00000542717 C9orf118A6NHY6 69 aa0.97□□□□□ -2.25
CHD4-209ENST00000542717 F8W1H4 67 aa0.97□□□□□ -2.25
CHD4-209ENST00000542717 LOC105371267A0A1B0GV96 52 aa0.96□□□□□ -2.26
CHD4-209ENST00000542717 J3QR89 54 aa0.96□□□□□ -2.26
CHD4-209ENST00000542717 TAX1BP3O14907 124 aa0.96□□□□□ -2.26
CHD4-209ENST00000542717 ATP5EP2Q5VTU8 51 aa0.96□□□□□ -2.26
CHD4-209ENST00000542717 FAM240AA0A1B0GVK7 77 aa0.95□□□□□ -2.26
CHD4-209ENST00000542717 LINC00208Q96KT6 92 aa0.95□□□□□ -2.26
CHD4-209ENST00000542717 KRTAP4-12Q9BQ66 201 aa0.95□□□□□ -2.26
CHD4-209ENST00000542717 KRTAP6-1Q3LI64 71 aa0.94□□□□□ -2.26
CHD4-209ENST00000542717 DMAC1Q96GE9 116 aa0.94□□□□□ -2.26
CHD4-209ENST00000542717 MP68P56378 58 aa0.93□□□□□ -2.26
CHD4-209ENST00000542717 TRAV7A0A075B6U4 112 aa0.92□□□□□ -2.26
CHD4-209ENST00000542717 PCP4L1A6NKN8 68 aa0.92□□□□□ -2.26
CHD4-209ENST00000542717 MT1AP04731 61 aa0.92□□□□□ -2.26
CHD4-209ENST00000542717 KRTAP13-4Q3LI77 160 aa0.92□□□□□ -2.26
CHD4-209ENST00000542717 ETDBQ3ZM63 59 aa0.92□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms