RNA–Protein interactions for RNA: ENST00000542502.5

MDM2-228, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-228ENST00000542502 IGKV3D-7A0A0C4DH55 119 aa2.33□□□□□ -2.04
MDM2-228ENST00000542502 hDV103S1A0JD37 113 aa2.33□□□□□ -2.04
MDM2-228ENST00000542502 LINC00643Q86TS7 51 aa2.33□□□□□ -2.04
MDM2-228ENST00000542502 TMEM254Q8TBM7 123 aa2.33□□□□□ -2.04
MDM2-228ENST00000542502 C8orf17Q9NRJ1 99 aa2.33□□□□□ -2.04
MDM2-228ENST00000542502 MRPL34Q9BQ48 92 aaKnown RBP2.32□□□□□ -2.04
MDM2-228ENST00000542502 TP53AIP1Q9HCN2 124 aa2.32□□□□□ -2.04
MDM2-228ENST00000542502 UBR4Q5T4S7 5183 aa2.31□□□□□ -2.04
MDM2-228ENST00000542502 HCG22E2RYF7 251 aa2.31□□□□□ -2.04
MDM2-228ENST00000542502 K7EQZ3 153 aa2.31□□□□□ -2.04
MDM2-228ENST00000542502 PCOTHQ58A44 107 aa2.31□□□□□ -2.04
MDM2-228ENST00000542502 CASC2Q6XLA1 102 aa2.31□□□□□ -2.04
MDM2-228ENST00000542502 MMP24-AS1A0A0U1RRL7 71 aa2.3□□□□□ -2.04
MDM2-228ENST00000542502 IMUPQ9GZP8 106 aa2.3□□□□□ -2.04
MDM2-228ENST00000542502 NDUFS5O43920 106 aa2.29□□□□□ -2.04
MDM2-228ENST00000542502 KRTAP10-10P60014 251 aa2.29□□□□□ -2.04
MDM2-228ENST00000542502 WFDC13Q8IUB5 93 aa2.29□□□□□ -2.04
MDM2-228ENST00000542502 ZCCHC13Q8WW36 166 aaKnown RBP2.29□□□□□ -2.04
MDM2-228ENST00000542502 LPAP08519 4548 aa2.29□□□□□ -2.04
MDM2-228ENST00000542502 HIST1H4AP62805 103 aaKnown RBP2.28□□□□□ -2.04
MDM2-228ENST00000542502 RBM12B-AS1Q9P1G2 102 aa2.28□□□□□ -2.04
MDM2-228ENST00000542502 ATOX1O00244 68 aa2.27□□□□□ -2.05
MDM2-228ENST00000542502 RNF213Q63HN8 5207 aa2.26□□□□□ -2.05
MDM2-228ENST00000542502 SMIM20Q8N5G0 67 aa2.26□□□□□ -2.05
MDM2-228ENST00000542502 V9GYY9 64 aa2.26□□□□□ -2.05
MDM2-228ENST00000542502 MUC2Q02817 5179 aa2.25□□□□□ -2.05
MDM2-228ENST00000542502 UQCRQO14949 82 aa2.25□□□□□ -2.05
MDM2-228ENST00000542502 SCGB1A1P11684 91 aa2.25□□□□□ -2.05
MDM2-228ENST00000542502 SPINK7P58062 85 aa2.25□□□□□ -2.05
MDM2-228ENST00000542502 COX6B2Q6YFQ2 88 aa2.25□□□□□ -2.05
MDM2-228ENST00000542502 C7orf65Q6ZTY9 151 aa2.25□□□□□ -2.05
MDM2-228ENST00000542502 TRAV22A0A0B4J277 110 aa2.24□□□□□ -2.05
MDM2-228ENST00000542502 FAM236DA0A1B0GTK5 79 aa2.23□□□□□ -2.05
MDM2-228ENST00000542502 LOC101927531A0A1B0GV80 90 aa2.23□□□□□ -2.05
MDM2-228ENST00000542502 H3BPC8 53 aa2.23□□□□□ -2.05
MDM2-228ENST00000542502 FAM236CP0DP71 79 aa2.23□□□□□ -2.05
MDM2-228ENST00000542502 MP68P56378 58 aa2.23□□□□□ -2.05
MDM2-228ENST00000542502 C5orf47Q569G3 176 aa2.23□□□□□ -2.05
MDM2-228ENST00000542502 Q5W150 140 aa2.23□□□□□ -2.05
MDM2-228ENST00000542502 MUC17Q685J3 4493 aa2.23□□□□□ -2.05
MDM2-228ENST00000542502 A0A087WVE0 104 aa2.2□□□□□ -2.06
MDM2-228ENST00000542502 SMIM26A0A096LP01 95 aa2.2□□□□□ -2.06
MDM2-228ENST00000542502 KRTAP4-1Q9BYQ7 146 aa2.2□□□□□ -2.06
MDM2-228ENST00000542502 TRAV7A0A075B6U4 112 aa2.19□□□□□ -2.06
MDM2-228ENST00000542502 H0Y9P7 68 aa2.19□□□□□ -2.06
MDM2-228ENST00000542502 M0R2T5 61 aa2.19□□□□□ -2.06
MDM2-228ENST00000542502 HRES1P13985 223 aa2.19□□□□□ -2.06
MDM2-228ENST00000542502 CYP4F30PQ9H0H9 118 aa2.19□□□□□ -2.06
MDM2-228ENST00000542502 FLGP20930 4061 aaPredicted RBP2.18□□□□□ -2.06
MDM2-228ENST00000542502 FAM236AA0A1B0GUQ0 79 aa2.18□□□□□ -2.06
MDM2-228ENST00000542502 FAM236BA0A1B0GV22 79 aa2.18□□□□□ -2.06
MDM2-228ENST00000542502 A8MUN3 132 aa2.18□□□□□ -2.06
MDM2-228ENST00000542502 MT-ATP8P03928 68 aa2.18□□□□□ -2.06
MDM2-228ENST00000542502 H1FX-AS1Q4G0G2 97 aa2.18□□□□□ -2.06
MDM2-228ENST00000542502 C1orf64Q8NEQ6 169 aa2.18□□□□□ -2.06
MDM2-228ENST00000542502 LINC00208Q96KT6 92 aa2.17□□□□□ -2.06
MDM2-228ENST00000542502 KRTAP19-2Q3LHN2 52 aa2.16□□□□□ -2.06
MDM2-228ENST00000542502 SERP2Q8N6R1 65 aa2.16□□□□□ -2.06
MDM2-228ENST00000542502 MT1HP80294 61 aa2.15□□□□□ -2.07
MDM2-228ENST00000542502 C4orf26Q17RF5 130 aa2.15□□□□□ -2.07
MDM2-228ENST00000542502 PSPHP1O15172 72 aa2.14□□□□□ -2.07
MDM2-228ENST00000542502 FAT4Q6V0I7 4981 aa2.14□□□□□ -2.07
MDM2-228ENST00000542502 NDUFC1O43677 76 aa2.13□□□□□ -2.07
MDM2-228ENST00000542502 CSAG1Q6PB30 78 aa2.13□□□□□ -2.07
MDM2-228ENST00000542502 S4R3F8 94 aa2.12□□□□□ -2.07
MDM2-228ENST00000542502 ACYP2P14621 99 aa2.11□□□□□ -2.07
MDM2-228ENST00000542502 COX7CP15954 63 aa2.11□□□□□ -2.07
MDM2-228ENST00000542502 KLKP1Q107X0 134 aa2.11□□□□□ -2.07
MDM2-228ENST00000542502 SPANXA2-OT1Q8N9U9 137 aa2.11□□□□□ -2.07
MDM2-228ENST00000542502 SPTSSBQ8NFR3 76 aa2.11□□□□□ -2.07
MDM2-228ENST00000542502 ANAPC13Q9BS18 74 aa2.1□□□□□ -2.07
MDM2-228ENST00000542502 SPRR5A0A1B0GTR4 108 aa2.09□□□□□ -2.07
MDM2-228ENST00000542502 KRTAP21-2Q3LI59 83 aa2.09□□□□□ -2.07
MDM2-228ENST00000542502 C20orf197Q8N268 126 aa2.09□□□□□ -2.07
MDM2-228ENST00000542502 DMAC1Q96GE9 116 aa2.09□□□□□ -2.07
MDM2-228ENST00000542502 PRO0628Q9UI54 55 aa2.09□□□□□ -2.07
MDM2-228ENST00000542502 H0YAA0 97 aa2.07□□□□□ -2.08
MDM2-228ENST00000542502 LCA10Q71F78 164 aa2.07□□□□□ -2.08
MDM2-228ENST00000542502 SNURFQ9Y675 71 aa2.07□□□□□ -2.08
MDM2-228ENST00000542502 CHKB-CPT1BH3BT56 60 aa2.06□□□□□ -2.08
MDM2-228ENST00000542502 CRIPTQ9P021 101 aa2.06□□□□□ -2.08
MDM2-228ENST00000542502 ATP5EP56381 51 aaPredicted RBP2.05□□□□□ -2.08
MDM2-228ENST00000542502 LUZP6Q538Z0 58 aa2.04□□□□□ -2.08
MDM2-228ENST00000542502 H7BZZ5 65 aa2.03□□□□□ -2.08
MDM2-228ENST00000542502 MT2AP02795 61 aa2.03□□□□□ -2.08
MDM2-228ENST00000542502 TMEM258P61165 79 aa2□□□□□ -2.09
MDM2-228ENST00000542502 MT1FP04733 61 aa1.99□□□□□ -2.09
MDM2-228ENST00000542502 ADM2Q7Z4H4 148 aa1.99□□□□□ -2.09
MDM2-228ENST00000542502 COA5Q86WW8 74 aa1.99□□□□□ -2.09
MDM2-228ENST00000542502 CCDC179H3BU77 68 aa1.98□□□□□ -2.09
MDM2-228ENST00000542502 SERP1Q9Y6X1 66 aa1.98□□□□□ -2.09
MDM2-228ENST00000542502 R4GN34 69 aa1.98□□□□□ -2.09
MDM2-228ENST00000542502 M0QZ58 72 aa1.97□□□□□ -2.09
MDM2-228ENST00000542502 SPINT4Q6UDR6 99 aa1.97□□□□□ -2.09
MDM2-228ENST00000542502 SPRR2GQ9BYE4 73 aa1.97□□□□□ -2.09
MDM2-228ENST00000542502 PRR15LQ9BU68 103 aa1.96□□□□□ -2.1
MDM2-228ENST00000542502 Q5VV11 94 aa1.95□□□□□ -2.1
MDM2-228ENST00000542502 CYSTM1Q9H1C7 97 aa1.94□□□□□ -2.1
MDM2-228ENST00000542502 CRCT1Q9UGL9 99 aa1.94□□□□□ -2.1
MDM2-228ENST00000542502 A0A1B0GU69 56 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 117.9 ms