RNA–Protein interactions for RNA: ENST00000542337.5

DDB1-220, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-220ENST00000542337 FAM240AA0A1B0GVK7 77 aa9.04□□□□□ -0.96
DDB1-220ENST00000542337 UQCRQO14949 82 aa9.04□□□□□ -0.96
DDB1-220ENST00000542337 ATOX1O00244 68 aa9.03□□□□□ -0.96
DDB1-220ENST00000542337 CRIPTQ9P021 101 aa9.01□□□□□ -0.97
DDB1-220ENST00000542337 H0Y9P7 68 aa8.99□□□□□ -0.97
DDB1-220ENST00000542337 IMUPQ9GZP8 106 aa8.99□□□□□ -0.97
DDB1-220ENST00000542337 A0A087WVE0 104 aa8.97□□□□□ -0.97
DDB1-220ENST00000542337 NDUFC1O43677 76 aa8.97□□□□□ -0.97
DDB1-220ENST00000542337 KRTAP10-5P60370 271 aa8.91□□□□□ -0.98
DDB1-220ENST00000542337 A8MUN3 132 aa8.89□□□□□ -0.99
DDB1-220ENST00000542337 LINC00643Q86TS7 51 aa8.89□□□□□ -0.99
DDB1-220ENST00000542337 H0YAA0 97 aa8.86□□□□□ -0.99
DDB1-220ENST00000542337 LINC00208Q96KT6 92 aa8.84□□□□□ -0.99
DDB1-220ENST00000542337 MP68P56378 58 aa8.83□□□□□ -1
DDB1-220ENST00000542337 ADM2Q7Z4H4 148 aa8.78□□□□□ -1
DDB1-220ENST00000542337 NEBP20929 6669 aa8.77□□□□□ -1.01
DDB1-220ENST00000542337 OCR1Q9BZK8 76 aa8.73□□□□□ -1.01
DDB1-220ENST00000542337 MUC12Q9UKN1 5478 aa8.66□□□□□ -1.02
DDB1-220ENST00000542337 H3BPC8 53 aa8.66□□□□□ -1.02
DDB1-220ENST00000542337 J3QR89 54 aa8.64□□□□□ -1.03
DDB1-220ENST00000542337 PRO2289Q9P1D8 64 aa8.64□□□□□ -1.03
DDB1-220ENST00000542337 A0A1B0GV90 55 aa8.63□□□□□ -1.03
DDB1-220ENST00000542337 C20orf197Q8N268 126 aa8.63□□□□□ -1.03
DDB1-220ENST00000542337 PLAC4Q8WY50 150 aa8.63□□□□□ -1.03
DDB1-220ENST00000542337 SCGB1A1P11684 91 aa8.62□□□□□ -1.03
DDB1-220ENST00000542337 KRTAP5-9P26371 169 aa8.62□□□□□ -1.03
DDB1-220ENST00000542337 R4GN34 69 aa8.6□□□□□ -1.03
DDB1-220ENST00000542337 DMAC1Q96GE9 116 aa8.55□□□□□ -1.04
DDB1-220ENST00000542337 P0C880 135 aa8.51□□□□□ -1.05
DDB1-220ENST00000542337 KRTAP20-1Q3LI63 56 aa8.51□□□□□ -1.05
DDB1-220ENST00000542337 M0QZ58 72 aa8.5□□□□□ -1.05
DDB1-220ENST00000542337 KMT2DO14686 5537 aa8.49□□□□□ -1.05
DDB1-220ENST00000542337 MT1XP80297 61 aa8.48□□□□□ -1.05
DDB1-220ENST00000542337 MDN1Q9NU22 5596 aa8.45□□□□□ -1.06
DDB1-220ENST00000542337 TRAV7A0A075B6U4 112 aa8.41□□□□□ -1.06
DDB1-220ENST00000542337 LINC01554Q52M75 96 aa8.4□□□□□ -1.06
DDB1-220ENST00000542337 SPRR2FQ96RM1 72 aa8.4□□□□□ -1.06
DDB1-220ENST00000542337 KRTAP3-2Q9BYR7 98 aa8.4□□□□□ -1.06
DDB1-220ENST00000542337 ACYP2P14621 99 aa8.39□□□□□ -1.07
DDB1-220ENST00000542337 SPTSSBQ8NFR3 76 aa8.36□□□□□ -1.07
DDB1-220ENST00000542337 KRTAP8-1Q8IUC2 63 aa8.35□□□□□ -1.07
DDB1-220ENST00000542337 SMIM20Q8N5G0 67 aa8.34□□□□□ -1.07
DDB1-220ENST00000542337 KRTAP12-2P59991 146 aa8.33□□□□□ -1.08
DDB1-220ENST00000542337 SPRR2EP22531 72 aa8.3□□□□□ -1.08
DDB1-220ENST00000542337 SPRR2BP35325 72 aa8.3□□□□□ -1.08
DDB1-220ENST00000542337 SPRR2AP35326 72 aa8.3□□□□□ -1.08
DDB1-220ENST00000542337 KRTAP2-3P0C7H8 128 aa8.28□□□□□ -1.08
DDB1-220ENST00000542337 KRTAP2-4Q9BYR9 128 aa8.28□□□□□ -1.08
DDB1-220ENST00000542337 CHKB-CPT1BH3BT56 60 aa8.26□□□□□ -1.09
DDB1-220ENST00000542337 MT-ATP8P03928 68 aa8.26□□□□□ -1.09
DDB1-220ENST00000542337 K7ERU9 68 aa8.21□□□□□ -1.1
DDB1-220ENST00000542337 KRTAP4-8A0A0G2JLE6 195 aa8.14□□□□□ -1.11
DDB1-220ENST00000542337 KRTAP4-8Q9BYQ9 185 aa8.14□□□□□ -1.11
DDB1-220ENST00000542337 LCE1AQ5T7P2 110 aa8.13□□□□□ -1.11
DDB1-220ENST00000542337 SNURFQ9Y675 71 aa8.12□□□□□ -1.11
DDB1-220ENST00000542337 KRTAP10-7P60409 375 aaPredicted RBP8.09□□□□□ -1.11
DDB1-220ENST00000542337 KRTAP10-12P60413 245 aa8.07□□□□□ -1.12
DDB1-220ENST00000542337 SPANXA2-OT1Q8N9U9 137 aa8.05□□□□□ -1.12
DDB1-220ENST00000542337 SPRR2DP22532 72 aa8.03□□□□□ -1.12
DDB1-220ENST00000542337 KRTAP2-2Q9BYT5 123 aa8.01□□□□□ -1.13
DDB1-220ENST00000542337 KRTAP2-1Q9BYU5 128 aa8.01□□□□□ -1.13
DDB1-220ENST00000542337 SERP2Q8N6R1 65 aa7.96□□□□□ -1.14
DDB1-220ENST00000542337 CAMK2N1Q7Z7J9 78 aa7.92□□□□□ -1.14
DDB1-220ENST00000542337 KRTAP13-4Q3LI77 160 aa7.87□□□□□ -1.15
DDB1-220ENST00000542337 SEC61GP60059 68 aa7.85□□□□□ -1.15
DDB1-220ENST00000542337 COA5Q86WW8 74 aa7.83□□□□□ -1.16
DDB1-220ENST00000542337 SERP1Q9Y6X1 66 aa7.82□□□□□ -1.16
DDB1-220ENST00000542337 LCE3BQ5TA77 95 aa7.81□□□□□ -1.16
DDB1-220ENST00000542337 A0A0D9SG42 100 aa7.71□□□□□ -1.18
DDB1-220ENST00000542337 COX7CP15954 63 aa7.67□□□□□ -1.18
DDB1-220ENST00000542337 A0A1B0GU33 70 aa7.65□□□□□ -1.18
DDB1-220ENST00000542337 SPATA8Q6RVD6 105 aa7.64□□□□□ -1.19
DDB1-220ENST00000542337 SPINT4Q6UDR6 99 aa7.64□□□□□ -1.19
DDB1-220ENST00000542337 KRTAP19-7Q3SYF9 63 aa7.56□□□□□ -1.2
DDB1-220ENST00000542337 H7BZZ5 65 aa7.55□□□□□ -1.2
DDB1-220ENST00000542337 MT1EP04732 61 aa7.53□□□□□ -1.2
DDB1-220ENST00000542337 LCE5AQ5TCM9 118 aa7.52□□□□□ -1.21
DDB1-220ENST00000542337 KRTAP19-3Q7Z4W3 81 aa7.51□□□□□ -1.21
DDB1-220ENST00000542337 KRTAP12-1P59990 96 aa7.5□□□□□ -1.21
DDB1-220ENST00000542337 A0A1B0GU69 56 aa7.48□□□□□ -1.21
DDB1-220ENST00000542337 CYSTM1Q9H1C7 97 aa7.48□□□□□ -1.21
DDB1-220ENST00000542337 SMIM26A0A096LP01 95 aa7.47□□□□□ -1.21
DDB1-220ENST00000542337 DSTQ03001 7570 aaKnown RBP7.42□□□□□ -1.22
DDB1-220ENST00000542337 KRTAP19-5Q3LI72 72 aa7.39□□□□□ -1.23
DDB1-220ENST00000542337 MT1GP13640 62 aa7.35□□□□□ -1.23
DDB1-220ENST00000542337 ANAPC13Q9BS18 74 aa7.35□□□□□ -1.23
DDB1-220ENST00000542337 PP632Q6XCG6 107 aa7.34□□□□□ -1.23
DDB1-220ENST00000542337 A8MU10 97 aa7.32□□□□□ -1.24
DDB1-220ENST00000542337 PRR15LQ9BU68 103 aa7.27□□□□□ -1.25
DDB1-220ENST00000542337 KRTAP4-9Q9BYQ8 210 aa7.27□□□□□ -1.25
DDB1-220ENST00000542337 TNP1P09430 55 aa7.26□□□□□ -1.25
DDB1-220ENST00000542337 ATP5EP56381 51 aaPredicted RBP7.19□□□□□ -1.26
DDB1-220ENST00000542337 MT1LQ93083 61 aa7.18□□□□□ -1.26
DDB1-220ENST00000542337 GPR98Q8WXG9 6306 aa7.18□□□□□ -1.26
DDB1-220ENST00000542337 LCE3AQ5TA76 89 aa7.17□□□□□ -1.26
DDB1-220ENST00000542337 MT1MQ8N339 61 aa7.17□□□□□ -1.26
DDB1-220ENST00000542337 C10orf95Q9H7T3 257 aa7.17□□□□□ -1.26
DDB1-220ENST00000542337 CCDC179H3BU77 68 aa7.15□□□□□ -1.26
DDB1-220ENST00000542337 LCE4AQ5TA78 99 aa7.1□□□□□ -1.27
DDB1-220ENST00000542337 LCE1DQ5T752 114 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms