RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 KRTAP19-8Q3LI54 63 aa8.83□□□□□ -1
TNFRSF1B-204ENST00000536782 LOC101927531A0A1B0GV80 90 aa8.8□□□□□ -1
TNFRSF1B-204ENST00000536782 CYP4F30PQ9H0H9 118 aa8.8□□□□□ -1
TNFRSF1B-204ENST00000536782 UQCRQO14949 82 aa8.79□□□□□ -1
TNFRSF1B-204ENST00000536782 A0A087WVE0 104 aa8.75□□□□□ -1.01
TNFRSF1B-204ENST00000536782 ATOX1O00244 68 aa8.75□□□□□ -1.01
TNFRSF1B-204ENST00000536782 KRTAP10-5P60370 271 aa8.75□□□□□ -1.01
TNFRSF1B-204ENST00000536782 KLKP1Q107X0 134 aa8.75□□□□□ -1.01
TNFRSF1B-204ENST00000536782 H0Y9P7 68 aa8.71□□□□□ -1.02
TNFRSF1B-204ENST00000536782 KRTAP20-1Q3LI63 56 aa8.68□□□□□ -1.02
TNFRSF1B-204ENST00000536782 KRTAP3-3Q9BYR6 98 aa8.67□□□□□ -1.02
TNFRSF1B-204ENST00000536782 KMT2DO14686 5537 aa8.66□□□□□ -1.02
TNFRSF1B-204ENST00000536782 KRTAP5-9P26371 169 aa8.66□□□□□ -1.02
TNFRSF1B-204ENST00000536782 K7ERU9 68 aa8.64□□□□□ -1.03
TNFRSF1B-204ENST00000536782 OCR1Q9BZK8 76 aa8.62□□□□□ -1.03
TNFRSF1B-204ENST00000536782 CRIPTQ9P021 101 aa8.62□□□□□ -1.03
TNFRSF1B-204ENST00000536782 MDN1Q9NU22 5596 aa8.61□□□□□ -1.03
TNFRSF1B-204ENST00000536782 MP68P56378 58 aa8.6□□□□□ -1.03
TNFRSF1B-204ENST00000536782 IMUPQ9GZP8 106 aa8.6□□□□□ -1.03
TNFRSF1B-204ENST00000536782 SCGB1A1P11684 91 aa8.58□□□□□ -1.04
TNFRSF1B-204ENST00000536782 LINC00208Q96KT6 92 aa8.57□□□□□ -1.04
TNFRSF1B-204ENST00000536782 A8MUN3 132 aa8.54□□□□□ -1.04
TNFRSF1B-204ENST00000536782 H3BPC8 53 aa8.51□□□□□ -1.05
TNFRSF1B-204ENST00000536782 NDUFC1O43677 76 aa8.45□□□□□ -1.06
TNFRSF1B-204ENST00000536782 H0YAA0 97 aa8.44□□□□□ -1.06
TNFRSF1B-204ENST00000536782 SMIM20Q8N5G0 67 aa8.43□□□□□ -1.06
TNFRSF1B-204ENST00000536782 MT-ATP8P03928 68 aa8.42□□□□□ -1.06
TNFRSF1B-204ENST00000536782 KRTAP2-3P0C7H8 128 aa8.35□□□□□ -1.07
TNFRSF1B-204ENST00000536782 KRTAP2-4Q9BYR9 128 aa8.35□□□□□ -1.07
TNFRSF1B-204ENST00000536782 ADM2Q7Z4H4 148 aa8.34□□□□□ -1.07
TNFRSF1B-204ENST00000536782 PRO2289Q9P1D8 64 aa8.34□□□□□ -1.07
TNFRSF1B-204ENST00000536782 TRAV7A0A075B6U4 112 aa8.33□□□□□ -1.08
TNFRSF1B-204ENST00000536782 DMAC1Q96GE9 116 aa8.32□□□□□ -1.08
TNFRSF1B-204ENST00000536782 SPRR2FQ96RM1 72 aa8.31□□□□□ -1.08
TNFRSF1B-204ENST00000536782 MT1XP80297 61 aa8.27□□□□□ -1.09
TNFRSF1B-204ENST00000536782 SPRR2EP22531 72 aa8.25□□□□□ -1.09
TNFRSF1B-204ENST00000536782 SPRR2BP35325 72 aa8.25□□□□□ -1.09
TNFRSF1B-204ENST00000536782 SPRR2AP35326 72 aa8.25□□□□□ -1.09
TNFRSF1B-204ENST00000536782 PLAC4Q8WY50 150 aa8.25□□□□□ -1.09
TNFRSF1B-204ENST00000536782 KRTAP8-1Q8IUC2 63 aa8.19□□□□□ -1.1
TNFRSF1B-204ENST00000536782 R4GN34 69 aa8.16□□□□□ -1.1
TNFRSF1B-204ENST00000536782 ACYP2P14621 99 aa8.14□□□□□ -1.11
TNFRSF1B-204ENST00000536782 KRTAP12-2P59991 146 aa8.13□□□□□ -1.11
TNFRSF1B-204ENST00000536782 C20orf197Q8N268 126 aa8.13□□□□□ -1.11
TNFRSF1B-204ENST00000536782 SERP2Q8N6R1 65 aa8.13□□□□□ -1.11
TNFRSF1B-204ENST00000536782 LCE1AQ5T7P2 110 aa8.12□□□□□ -1.11
TNFRSF1B-204ENST00000536782 P0C880 135 aa8.1□□□□□ -1.11
TNFRSF1B-204ENST00000536782 M0QZ58 72 aa8.08□□□□□ -1.12
TNFRSF1B-204ENST00000536782 SNURFQ9Y675 71 aa8.08□□□□□ -1.12
TNFRSF1B-204ENST00000536782 KRTAP2-2Q9BYT5 123 aa8.07□□□□□ -1.12
TNFRSF1B-204ENST00000536782 KRTAP2-1Q9BYU5 128 aa8.07□□□□□ -1.12
TNFRSF1B-204ENST00000536782 SPTSSBQ8NFR3 76 aa8.06□□□□□ -1.12
TNFRSF1B-204ENST00000536782 SPANXA2-OT1Q8N9U9 137 aa8.02□□□□□ -1.13
TNFRSF1B-204ENST00000536782 KRTAP3-2Q9BYR7 98 aa8.02□□□□□ -1.13
TNFRSF1B-204ENST00000536782 KRTAP4-8A0A0G2JLE6 195 aa8□□□□□ -1.13
TNFRSF1B-204ENST00000536782 CHKB-CPT1BH3BT56 60 aa8□□□□□ -1.13
TNFRSF1B-204ENST00000536782 KRTAP4-8Q9BYQ9 185 aa8□□□□□ -1.13
TNFRSF1B-204ENST00000536782 SPRR2DP22532 72 aa7.98□□□□□ -1.13
TNFRSF1B-204ENST00000536782 LINC01554Q52M75 96 aa7.98□□□□□ -1.13
TNFRSF1B-204ENST00000536782 COX7CP15954 63 aa7.93□□□□□ -1.14
TNFRSF1B-204ENST00000536782 KRTAP10-7P60409 375 aaPredicted RBP7.89□□□□□ -1.15
TNFRSF1B-204ENST00000536782 KRTAP10-12P60413 245 aa7.85□□□□□ -1.15
TNFRSF1B-204ENST00000536782 ANAPC13Q9BS18 74 aa7.79□□□□□ -1.16
TNFRSF1B-204ENST00000536782 LCE3BQ5TA77 95 aa7.78□□□□□ -1.16
TNFRSF1B-204ENST00000536782 COA5Q86WW8 74 aa7.74□□□□□ -1.17
TNFRSF1B-204ENST00000536782 H7BZZ5 65 aa7.72□□□□□ -1.17
TNFRSF1B-204ENST00000536782 SEC61GP60059 68 aa7.66□□□□□ -1.18
TNFRSF1B-204ENST00000536782 CYSTM1Q9H1C7 97 aa7.65□□□□□ -1.18
TNFRSF1B-204ENST00000536782 SERP1Q9Y6X1 66 aa7.61□□□□□ -1.19
TNFRSF1B-204ENST00000536782 KRTAP13-4Q3LI77 160 aa7.58□□□□□ -1.2
TNFRSF1B-204ENST00000536782 GPR98Q8WXG9 6306 aa7.56□□□□□ -1.2
TNFRSF1B-204ENST00000536782 CCDC179H3BU77 68 aa7.53□□□□□ -1.2
TNFRSF1B-204ENST00000536782 ATP5EP56381 51 aaPredicted RBP7.53□□□□□ -1.2
TNFRSF1B-204ENST00000536782 DSTQ03001 7570 aaKnown RBP7.48□□□□□ -1.21
TNFRSF1B-204ENST00000536782 CAMK2N1Q7Z7J9 78 aa7.47□□□□□ -1.21
TNFRSF1B-204ENST00000536782 A0A1B0GU33 70 aa7.42□□□□□ -1.22
TNFRSF1B-204ENST00000536782 LCE5AQ5TCM9 118 aa7.4□□□□□ -1.22
TNFRSF1B-204ENST00000536782 A0A1B0GU69 56 aa7.39□□□□□ -1.23
TNFRSF1B-204ENST00000536782 KRTAP19-7Q3SYF9 63 aa7.39□□□□□ -1.23
TNFRSF1B-204ENST00000536782 KRTAP4-9Q9BYQ8 210 aa7.38□□□□□ -1.23
TNFRSF1B-204ENST00000536782 TMEM258P61165 79 aa7.37□□□□□ -1.23
TNFRSF1B-204ENST00000536782 SPATA8Q6RVD6 105 aa7.36□□□□□ -1.23
TNFRSF1B-204ENST00000536782 A0A0D9SG42 100 aa7.35□□□□□ -1.23
TNFRSF1B-204ENST00000536782 MT1EP04732 61 aa7.35□□□□□ -1.23
TNFRSF1B-204ENST00000536782 KRTAP19-3Q7Z4W3 81 aa7.35□□□□□ -1.23
TNFRSF1B-204ENST00000536782 PRR15LQ9BU68 103 aa7.31□□□□□ -1.24
TNFRSF1B-204ENST00000536782 SMIM26A0A096LP01 95 aa7.25□□□□□ -1.25
TNFRSF1B-204ENST00000536782 SPINT4Q6UDR6 99 aa7.25□□□□□ -1.25
TNFRSF1B-204ENST00000536782 KRTAP12-1P59990 96 aa7.23□□□□□ -1.25
TNFRSF1B-204ENST00000536782 LINC01558Q9Y6Z2 57 aa7.18□□□□□ -1.26
TNFRSF1B-204ENST00000536782 LCE1DQ5T752 114 aa7.16□□□□□ -1.26
TNFRSF1B-204ENST00000536782 MT1GP13640 62 aa7.15□□□□□ -1.26
TNFRSF1B-204ENST00000536782 KRTAP19-5Q3LI72 72 aa7.14□□□□□ -1.27
TNFRSF1B-204ENST00000536782 A8MU10 97 aa7.11□□□□□ -1.27
TNFRSF1B-204ENST00000536782 PP632Q6XCG6 107 aa7.11□□□□□ -1.27
TNFRSF1B-204ENST00000536782 HMCN1Q96RW7 5635 aa7.1□□□□□ -1.27
TNFRSF1B-204ENST00000536782 LCE4AQ5TA78 99 aa7.04□□□□□ -1.28
TNFRSF1B-204ENST00000536782 UQCR11O14957 56 aa7.03□□□□□ -1.28
TNFRSF1B-204ENST00000536782 V9GYY9 64 aa7.02□□□□□ -1.29
TNFRSF1B-204ENST00000536782 MT1MQ8N339 61 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms