RNA–Protein interactions for RNA: ENST00000536404.6

CHRNB1-202, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNB1, Length 1,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-202ENST00000536404 IGLV7-43P04211 117 aa6.69□□□□□ -1.34
CHRNB1-202ENST00000536404 KRTAP10-8P60410 259 aa6.69□□□□□ -1.34
CHRNB1-202ENST00000536404 KRTAP25-1Q3LHN0 102 aa6.67□□□□□ -1.34
CHRNB1-202ENST00000536404 Q5W150 140 aa6.65□□□□□ -1.34
CHRNB1-202ENST00000536404 ANAPC11Q9NYG5 84 aa6.64□□□□□ -1.35
CHRNB1-202ENST00000536404 IGKV2-30P06310 120 aa6.61□□□□□ -1.35
CHRNB1-202ENST00000536404 LPAP08519 4548 aa6.57□□□□□ -1.36
CHRNB1-202ENST00000536404 LCE2DQ5TA82 110 aaPredicted RBP6.53□□□□□ -1.36
CHRNB1-202ENST00000536404 KRTAP1-4P0C5Y4 121 aa6.51□□□□□ -1.37
CHRNB1-202ENST00000536404 A8MUU9 505 aa6.5□□□□□ -1.37
CHRNB1-202ENST00000536404 KRTAP16-1A8MUX0 517 aa6.5□□□□□ -1.37
CHRNB1-202ENST00000536404 IGKV2D-30A0A075B6S6 120 aa6.48□□□□□ -1.37
CHRNB1-202ENST00000536404 A0A0A0MQY5 61 aa6.46□□□□□ -1.38
CHRNB1-202ENST00000536404 KRTAP13-2Q52LG2 175 aa6.45□□□□□ -1.38
CHRNB1-202ENST00000536404 SPINK1P00995 79 aa6.43□□□□□ -1.38
CHRNB1-202ENST00000536404 K7ERS5 55 aa6.43□□□□□ -1.38
CHRNB1-202ENST00000536404 P0C880 135 aa6.42□□□□□ -1.38
CHRNB1-202ENST00000536404 RPS29P62273 56 aaKnown RBP6.41□□□□□ -1.38
CHRNB1-202ENST00000536404 LINC00304Q8N9R0 145 aa6.4□□□□□ -1.38
CHRNB1-202ENST00000536404 TYMSOSQ8TAI1 123 aa6.38□□□□□ -1.39
CHRNB1-202ENST00000536404 MUC2Q02817 5179 aa6.37□□□□□ -1.39
CHRNB1-202ENST00000536404 FAT4Q6V0I7 4981 aa6.31□□□□□ -1.4
CHRNB1-202ENST00000536404 C20orf166-AS1Q96NR2 134 aa6.31□□□□□ -1.4
CHRNB1-202ENST00000536404 H0YAA0 97 aa6.3□□□□□ -1.4
CHRNB1-202ENST00000536404 MUC17Q685J3 4493 aa6.3□□□□□ -1.4
CHRNB1-202ENST00000536404 SPINT4Q6UDR6 99 aa6.29□□□□□ -1.4
CHRNB1-202ENST00000536404 A0A1B0GU33 70 aa6.26□□□□□ -1.41
CHRNB1-202ENST00000536404 H1FX-AS1Q4G0G2 97 aa6.22□□□□□ -1.41
CHRNB1-202ENST00000536404 NDUFAF8A1L188 74 aa6.21□□□□□ -1.41
CHRNB1-202ENST00000536404 TPRXLQ17RH7 258 aa6.19□□□□□ -1.42
CHRNB1-202ENST00000536404 KRTAP15-1Q3LI76 137 aa6.17□□□□□ -1.42
CHRNB1-202ENST00000536404 LCE2AQ5TA79 106 aaPredicted RBP6.15□□□□□ -1.42
CHRNB1-202ENST00000536404 COX6B2Q6YFQ2 88 aa6.11□□□□□ -1.43
CHRNB1-202ENST00000536404 KRTAP9-2Q9BYQ4 174 aa6.11□□□□□ -1.43
CHRNB1-202ENST00000536404 C9orf92A6NGG3 77 aa6.09□□□□□ -1.43
CHRNB1-202ENST00000536404 LUZP6Q538Z0 58 aa6.09□□□□□ -1.43
CHRNB1-202ENST00000536404 KRTAP3-1Q9BYR8 98 aa6.07□□□□□ -1.44
CHRNB1-202ENST00000536404 CRIPTQ9P021 101 aa6.07□□□□□ -1.44
CHRNB1-202ENST00000536404 KRTAP4-1Q9BYQ7 146 aa6.06□□□□□ -1.44
CHRNB1-202ENST00000536404 RPL37P61927 97 aaKnown RBP6.04□□□□□ -1.44
CHRNB1-202ENST00000536404 SEC61BP60468 96 aaKnown RBP6□□□□□ -1.45
CHRNB1-202ENST00000536404 XP32Q5T750 250 aa5.98□□□□□ -1.45
CHRNB1-202ENST00000536404 KRTAP9-6A0A140TA67 174 aa5.94□□□□□ -1.46
CHRNB1-202ENST00000536404 LCE2CQ5TA81 110 aa5.9□□□□□ -1.46
CHRNB1-202ENST00000536404 S4R3F8 94 aa5.88□□□□□ -1.47
CHRNB1-202ENST00000536404 KRTAP19-2Q3LHN2 52 aa5.87□□□□□ -1.47
CHRNB1-202ENST00000536404 KRTAP3-3Q9BYR6 98 aa5.87□□□□□ -1.47
CHRNB1-202ENST00000536404 KRTAP3-2Q9BYR7 98 aa5.87□□□□□ -1.47
CHRNB1-202ENST00000536404 KRTAP10-6P60371 365 aaPredicted RBP5.85□□□□□ -1.47
CHRNB1-202ENST00000536404 MT1HP80294 61 aa5.82□□□□□ -1.48
CHRNB1-202ENST00000536404 FSIP2Q5CZC0 6907 aa5.82□□□□□ -1.48
CHRNB1-202ENST00000536404 C10orf95Q9H7T3 257 aa5.81□□□□□ -1.48
CHRNB1-202ENST00000536404 A0A0D9SG42 100 aa5.77□□□□□ -1.49
CHRNB1-202ENST00000536404 FLGP20930 4061 aaPredicted RBP5.76□□□□□ -1.49
CHRNB1-202ENST00000536404 CRCT1Q9UGL9 99 aa5.76□□□□□ -1.49
CHRNB1-202ENST00000536404 KRTAP13-4Q3LI77 160 aa5.74□□□□□ -1.49
CHRNB1-202ENST00000536404 LORP23490 312 aaPredicted RBP5.73□□□□□ -1.49
CHRNB1-202ENST00000536404 M0QZ58 72 aa5.71□□□□□ -1.5
CHRNB1-202ENST00000536404 M0R2T5 61 aa5.7□□□□□ -1.5
CHRNB1-202ENST00000536404 CAMK2N1Q7Z7J9 78 aa5.68□□□□□ -1.5
CHRNB1-202ENST00000536404 PLAC4Q8WY50 150 aa5.64□□□□□ -1.51
CHRNB1-202ENST00000536404 KRTAP12-1P59990 96 aa5.62□□□□□ -1.51
CHRNB1-202ENST00000536404 KRTAP12-2P59991 146 aa5.62□□□□□ -1.51
CHRNB1-202ENST00000536404 USH2AO75445 5202 aa5.55□□□□□ -1.52
CHRNB1-202ENST00000536404 SSPOA2VEC9 5147 aa5.53□□□□□ -1.52
CHRNB1-202ENST00000536404 KRTAP9-8Q9BYQ0 159 aa5.5□□□□□ -1.53
CHRNB1-202ENST00000536404 PP632Q6XCG6 107 aa5.46□□□□□ -1.54
CHRNB1-202ENST00000536404 R4GN34 69 aa5.45□□□□□ -1.54
CHRNB1-202ENST00000536404 MT2AP02795 61 aa5.41□□□□□ -1.54
CHRNB1-202ENST00000536404 PRO2289Q9P1D8 64 aa5.39□□□□□ -1.55
CHRNB1-202ENST00000536404 FCGBPQ9Y6R7 5405 aaPredicted RBP5.39□□□□□ -1.55
CHRNB1-202ENST00000536404 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.37□□□□□ -1.55
CHRNB1-202ENST00000536404 MT1FP04733 61 aa5.37□□□□□ -1.55
CHRNB1-202ENST00000536404 LCE2BO14633 110 aa5.34□□□□□ -1.55
CHRNB1-202ENST00000536404 KRTAP10-10P60014 251 aa5.33□□□□□ -1.56
CHRNB1-202ENST00000536404 KRTAP9-3Q9BYQ3 159 aa5.33□□□□□ -1.56
CHRNB1-202ENST00000536404 KRTAP9-7A8MTY7 169 aa5.32□□□□□ -1.56
CHRNB1-202ENST00000536404 LOC100996750A0A140TA64 210 aa5.3□□□□□ -1.56
CHRNB1-202ENST00000536404 KRTAP19-1Q8IUB9 90 aa5.3□□□□□ -1.56
CHRNB1-202ENST00000536404 KRTAP4-6Q9BYQ5 205 aa5.3□□□□□ -1.56
CHRNB1-202ENST00000536404 INE1O15225 51 aa5.25□□□□□ -1.57
CHRNB1-202ENST00000536404 MACF1Q9UPN3 7388 aaKnown RBP5.2□□□□□ -1.58
CHRNB1-202ENST00000536404 SPRR5A0A1B0GTR4 108 aa5.19□□□□□ -1.58
CHRNB1-202ENST00000536404 SYNE2Q8WXH0 6885 aaKnown RBP5.18□□□□□ -1.58
CHRNB1-202ENST00000536404 KRTAP23-1A1A580 65 aa5.15□□□□□ -1.58
CHRNB1-202ENST00000536404 KRTAP19-6Q3LI70 58 aa5.15□□□□□ -1.59
CHRNB1-202ENST00000536404 TNP1P09430 55 aa5.08□□□□□ -1.6
CHRNB1-202ENST00000536404 KRTAP6-3Q3LI67 103 aa4.97□□□□□ -1.61
CHRNB1-202ENST00000536404 NEBP20929 6669 aa4.91□□□□□ -1.62
CHRNB1-202ENST00000536404 MT1BP07438 61 aa4.9□□□□□ -1.63
CHRNB1-202ENST00000536404 MUC12Q9UKN1 5478 aa4.86□□□□□ -1.63
CHRNB1-202ENST00000536404 KRTAP19-8Q3LI54 63 aa4.86□□□□□ -1.63
CHRNB1-202ENST00000536404 SPRR2GQ9BYE4 73 aa4.85□□□□□ -1.63
CHRNB1-202ENST00000536404 KRTAP10-5P60370 271 aa4.79□□□□□ -1.64
CHRNB1-202ENST00000536404 MDN1Q9NU22 5596 aa4.74□□□□□ -1.65
CHRNB1-202ENST00000536404 KMT2DO14686 5537 aa4.73□□□□□ -1.65
CHRNB1-202ENST00000536404 KRTAP4-8Q9BYQ9 185 aa4.7□□□□□ -1.66
CHRNB1-202ENST00000536404 KRTAP5-9P26371 169 aa4.68□□□□□ -1.66
CHRNB1-202ENST00000536404 KRTAP20-1Q3LI63 56 aa4.66□□□□□ -1.66
CHRNB1-202ENST00000536404 LCE3AQ5TA76 89 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms