RNA–Protein interactions for RNA: ENST00000535871.1

CDCA3-205, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 454 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-205ENST00000535871 KRTAP9-2Q9BYQ4 174 aa3.39□□□□□ -1.87
CDCA3-205ENST00000535871 A8MUN3 132 aa3.38□□□□□ -1.87
CDCA3-205ENST00000535871 H7BZZ5 65 aa3.38□□□□□ -1.87
CDCA3-205ENST00000535871 ATP5EP56381 51 aaPredicted RBP3.38□□□□□ -1.87
CDCA3-205ENST00000535871 LCE3BQ5TA77 95 aa3.38□□□□□ -1.87
CDCA3-205ENST00000535871 LCE5AQ5TCM9 118 aa3.38□□□□□ -1.87
CDCA3-205ENST00000535871 LPAP08519 4548 aa3.37□□□□□ -1.87
CDCA3-205ENST00000535871 CCDC179H3BU77 68 aa3.37□□□□□ -1.87
CDCA3-205ENST00000535871 TMEM258P61165 79 aa3.36□□□□□ -1.87
CDCA3-205ENST00000535871 SNURFQ9Y675 71 aa3.36□□□□□ -1.87
CDCA3-205ENST00000535871 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.34□□□□□ -1.87
CDCA3-205ENST00000535871 HRES1P13985 223 aa3.34□□□□□ -1.87
CDCA3-205ENST00000535871 RBM12B-AS1Q9P1G2 102 aa3.34□□□□□ -1.87
CDCA3-205ENST00000535871 V9GYY9 64 aa3.34□□□□□ -1.87
CDCA3-205ENST00000535871 MUC17Q685J3 4493 aa3.34□□□□□ -1.88
CDCA3-205ENST00000535871 COX6B2Q6YFQ2 88 aa3.33□□□□□ -1.88
CDCA3-205ENST00000535871 DMAC1Q96GE9 116 aa3.33□□□□□ -1.88
CDCA3-205ENST00000535871 ACYP2P14621 99 aa3.31□□□□□ -1.88
CDCA3-205ENST00000535871 CYSTM1Q9H1C7 97 aa3.31□□□□□ -1.88
CDCA3-205ENST00000535871 FAM236DA0A1B0GTK5 79 aa3.29□□□□□ -1.88
CDCA3-205ENST00000535871 FAM236CP0DP71 79 aa3.29□□□□□ -1.88
CDCA3-205ENST00000535871 C4orf26Q17RF5 130 aa3.29□□□□□ -1.88
CDCA3-205ENST00000535871 KRTAP4-1Q9BYQ7 146 aa3.28□□□□□ -1.88
CDCA3-205ENST00000535871 H1FX-AS1Q4G0G2 97 aa3.27□□□□□ -1.89
CDCA3-205ENST00000535871 RPS28P62857 69 aaKnown RBP3.26□□□□□ -1.89
CDCA3-205ENST00000535871 KRTAP19-2Q3LHN2 52 aa3.25□□□□□ -1.89
CDCA3-205ENST00000535871 SPTSSBQ8NFR3 76 aa3.25□□□□□ -1.89
CDCA3-205ENST00000535871 SERP1Q9Y6X1 66 aa3.25□□□□□ -1.89
CDCA3-205ENST00000535871 UBR4Q5T4S7 5183 aa3.25□□□□□ -1.89
CDCA3-205ENST00000535871 MUC2Q02817 5179 aa3.24□□□□□ -1.89
CDCA3-205ENST00000535871 FLGP20930 4061 aaPredicted RBP3.21□□□□□ -1.9
CDCA3-205ENST00000535871 COA5Q86WW8 74 aa3.21□□□□□ -1.9
CDCA3-205ENST00000535871 CHKB-CPT1BH3BT56 60 aa3.2□□□□□ -1.9
CDCA3-205ENST00000535871 S4R3F8 94 aa3.2□□□□□ -1.9
CDCA3-205ENST00000535871 RNF213Q63HN8 5207 aa3.18□□□□□ -1.9
CDCA3-205ENST00000535871 H0YAA0 97 aa3.18□□□□□ -1.9
CDCA3-205ENST00000535871 CSAG1Q6PB30 78 aa3.18□□□□□ -1.9
CDCA3-205ENST00000535871 LCA10Q71F78 164 aa3.17□□□□□ -1.9
CDCA3-205ENST00000535871 SMIM26A0A096LP01 95 aa3.16□□□□□ -1.9
CDCA3-205ENST00000535871 LCE1DQ5T752 114 aa3.16□□□□□ -1.9
CDCA3-205ENST00000535871 CAMK2N1Q7Z7J9 78 aa3.16□□□□□ -1.9
CDCA3-205ENST00000535871 MT1HP80294 61 aa3.13□□□□□ -1.91
CDCA3-205ENST00000535871 Q1T7F1 81 aa3.13□□□□□ -1.91
CDCA3-205ENST00000535871 LINC01558Q9Y6Z2 57 aa3.12□□□□□ -1.91
CDCA3-205ENST00000535871 FAT4Q6V0I7 4981 aa3.1□□□□□ -1.91
CDCA3-205ENST00000535871 PRR15LQ9BU68 103 aa3.1□□□□□ -1.91
CDCA3-205ENST00000535871 KRTAP4-8A0A0G2JLE6 195 aa3.08□□□□□ -1.92
CDCA3-205ENST00000535871 M0R2T5 61 aa3.07□□□□□ -1.92
CDCA3-205ENST00000535871 MT3P25713 68 aa3.07□□□□□ -1.92
CDCA3-205ENST00000535871 LCE1AQ5T7P2 110 aa3.07□□□□□ -1.92
CDCA3-205ENST00000535871 CRIPTQ9P021 101 aa3.07□□□□□ -1.92
CDCA3-205ENST00000535871 A0A1B0GU69 56 aa3.06□□□□□ -1.92
CDCA3-205ENST00000535871 PSPHP1O15172 72 aa3.06□□□□□ -1.92
CDCA3-205ENST00000535871 KRTAP10-6P60371 365 aaPredicted RBP3.04□□□□□ -1.92
CDCA3-205ENST00000535871 PRO0628Q9UI54 55 aa3.04□□□□□ -1.92
CDCA3-205ENST00000535871 M0QZ58 72 aa3.03□□□□□ -1.92
CDCA3-205ENST00000535871 ADM2Q7Z4H4 148 aa3.02□□□□□ -1.93
CDCA3-205ENST00000535871 KRTAP9-8Q9BYQ0 159 aa3.02□□□□□ -1.93
CDCA3-205ENST00000535871 A0A1B0GU33 70 aa3□□□□□ -1.93
CDCA3-205ENST00000535871 Q5VV11 94 aa3□□□□□ -1.93
CDCA3-205ENST00000535871 UQCR11O14957 56 aa2.99□□□□□ -1.93
CDCA3-205ENST00000535871 KRTAP4-9Q9BYQ8 210 aa2.99□□□□□ -1.93
CDCA3-205ENST00000535871 MT2AP02795 61 aa2.98□□□□□ -1.93
CDCA3-205ENST00000535871 P0C880 135 aa2.98□□□□□ -1.93
CDCA3-205ENST00000535871 SPRR2GQ9BYE4 73 aa2.97□□□□□ -1.93
CDCA3-205ENST00000535871 R4GN34 69 aa2.97□□□□□ -1.93
CDCA3-205ENST00000535871 A6NN06 94 aa2.96□□□□□ -1.94
CDCA3-205ENST00000535871 KRTAP4-11Q9BYQ6 195 aa2.96□□□□□ -1.94
CDCA3-205ENST00000535871 MT1FP04733 61 aa2.95□□□□□ -1.94
CDCA3-205ENST00000535871 KRTAP10-10P60014 251 aa2.95□□□□□ -1.94
CDCA3-205ENST00000535871 KRTAP4-7Q9BYR0 210 aa2.94□□□□□ -1.94
CDCA3-205ENST00000535871 SPATA8Q6RVD6 105 aa2.93□□□□□ -1.94
CDCA3-205ENST00000535871 A6NED7 52 aa2.91□□□□□ -1.94
CDCA3-205ENST00000535871 MIR22HGQ0VDD5 57 aa2.91□□□□□ -1.94
CDCA3-205ENST00000535871 CDC42SE1Q9NRR8 79 aa2.9□□□□□ -1.95
CDCA3-205ENST00000535871 KRTAP19-8Q3LI54 63 aa2.89□□□□□ -1.95
CDCA3-205ENST00000535871 LUZP6Q538Z0 58 aa2.89□□□□□ -1.95
CDCA3-205ENST00000535871 KRTAP13-4Q3LI77 160 aa2.88□□□□□ -1.95
CDCA3-205ENST00000535871 K7ERS5 55 aa2.86□□□□□ -1.95
CDCA3-205ENST00000535871 KRTAP12-1P59990 96 aa2.82□□□□□ -1.96
CDCA3-205ENST00000535871 PLAC4Q8WY50 150 aa2.82□□□□□ -1.96
CDCA3-205ENST00000535871 LINC01554Q52M75 96 aa2.81□□□□□ -1.96
CDCA3-205ENST00000535871 A8MU10 97 aa2.8□□□□□ -1.96
CDCA3-205ENST00000535871 MT1BP07438 61 aa2.8□□□□□ -1.96
CDCA3-205ENST00000535871 BRK1Q8WUW1 75 aa2.8□□□□□ -1.96
CDCA3-205ENST00000535871 KRTAP2-2Q9BYT5 123 aa2.8□□□□□ -1.96
CDCA3-205ENST00000535871 A0A0D9SG42 100 aa2.79□□□□□ -1.96
CDCA3-205ENST00000535871 LCE1FQ5T754 118 aa2.78□□□□□ -1.96
CDCA3-205ENST00000535871 KRTAP4-2Q9BYR5 136 aa2.78□□□□□ -1.96
CDCA3-205ENST00000535871 KRTAP12-2P59991 146 aa2.77□□□□□ -1.97
CDCA3-205ENST00000535871 PRO2289Q9P1D8 64 aa2.77□□□□□ -1.97
CDCA3-205ENST00000535871 SPINT4Q6UDR6 99 aa2.76□□□□□ -1.97
CDCA3-205ENST00000535871 KRTAP19-6Q3LI70 58 aa2.73□□□□□ -1.97
CDCA3-205ENST00000535871 KRTAP10-5P60370 271 aa2.71□□□□□ -1.98
CDCA3-205ENST00000535871 PMAIP1Q13794 54 aa2.71□□□□□ -1.98
CDCA3-205ENST00000535871 USH2AO75445 5202 aa2.7□□□□□ -1.98
CDCA3-205ENST00000535871 MT1XP80297 61 aa2.69□□□□□ -1.98
CDCA3-205ENST00000535871 ROMO1P60602 79 aa2.68□□□□□ -1.98
CDCA3-205ENST00000535871 KRTAP25-1Q3LHN0 102 aa2.67□□□□□ -1.98
CDCA3-205ENST00000535871 TNP1P09430 55 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms