RNA–Protein interactions for RNA: ENST00000535739.5

LTBR-205, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-205ENST00000535739 LOC101927531A0A1B0GV80 90 aa9.62□□□□□ -0.87
LTBR-205ENST00000535739 SERP2Q8N6R1 65 aa9.62□□□□□ -0.87
LTBR-205ENST00000535739 C1orf64Q8NEQ6 169 aa9.62□□□□□ -0.87
LTBR-205ENST00000535739 LINC00208Q96KT6 92 aa9.61□□□□□ -0.87
LTBR-205ENST00000535739 KRTAP3-3Q9BYR6 98 aa9.6□□□□□ -0.87
LTBR-205ENST00000535739 KRTAP3-2Q9BYR7 98 aa9.6□□□□□ -0.87
LTBR-205ENST00000535739 CYP4F30PQ9H0H9 118 aa9.6□□□□□ -0.87
LTBR-205ENST00000535739 H3BPC8 53 aa9.59□□□□□ -0.87
LTBR-205ENST00000535739 KRTAP6-3Q3LI67 103 aa9.59□□□□□ -0.87
LTBR-205ENST00000535739 ANAPC13Q9BS18 74 aa9.52□□□□□ -0.89
LTBR-205ENST00000535739 COX7CP15954 63 aa9.5□□□□□ -0.89
LTBR-205ENST00000535739 C20orf197Q8N268 126 aa9.47□□□□□ -0.89
LTBR-205ENST00000535739 KLKP1Q107X0 134 aa9.46□□□□□ -0.9
LTBR-205ENST00000535739 C4orf26Q17RF5 130 aa9.45□□□□□ -0.9
LTBR-205ENST00000535739 SNURFQ9Y675 71 aa9.45□□□□□ -0.9
LTBR-205ENST00000535739 KRTAP3-1Q9BYR8 98 aa9.33□□□□□ -0.92
LTBR-205ENST00000535739 A6NN06 94 aa9.32□□□□□ -0.92
LTBR-205ENST00000535739 MT1BP07438 61 aa9.32□□□□□ -0.92
LTBR-205ENST00000535739 NEBP20929 6669 aa9.32□□□□□ -0.92
LTBR-205ENST00000535739 CCDC179H3BU77 68 aa9.31□□□□□ -0.92
LTBR-205ENST00000535739 Q5VV11 94 aa9.28□□□□□ -0.92
LTBR-205ENST00000535739 S4R3F8 94 aa9.28□□□□□ -0.92
LTBR-205ENST00000535739 NDUFC1O43677 76 aa9.26□□□□□ -0.93
LTBR-205ENST00000535739 MUC12Q9UKN1 5478 aa9.25□□□□□ -0.93
LTBR-205ENST00000535739 KRTAP19-8Q3LI54 63 aa9.24□□□□□ -0.93
LTBR-205ENST00000535739 CSAG1Q6PB30 78 aa9.24□□□□□ -0.93
LTBR-205ENST00000535739 SPRR2GQ9BYE4 73 aa9.24□□□□□ -0.93
LTBR-205ENST00000535739 CYSTM1Q9H1C7 97 aa9.24□□□□□ -0.93
LTBR-205ENST00000535739 A8MUN3 132 aa9.23□□□□□ -0.93
LTBR-205ENST00000535739 LCA10Q71F78 164 aa9.23□□□□□ -0.93
LTBR-205ENST00000535739 SPANXA2-OT1Q8N9U9 137 aa9.21□□□□□ -0.94
LTBR-205ENST00000535739 H7BZZ5 65 aa9.2□□□□□ -0.94
LTBR-205ENST00000535739 DMAC1Q96GE9 116 aa9.19□□□□□ -0.94
LTBR-205ENST00000535739 KRTAP10-5P60370 271 aa9.16□□□□□ -0.94
LTBR-205ENST00000535739 ACYP2P14621 99 aa9.12□□□□□ -0.95
LTBR-205ENST00000535739 PCP4P48539 62 aa9.1□□□□□ -0.95
LTBR-205ENST00000535739 KRTAP20-1Q3LI63 56 aa9.04□□□□□ -0.96
LTBR-205ENST00000535739 KRTAP5-9P26371 169 aa9.02□□□□□ -0.97
LTBR-205ENST00000535739 TMEM258P61165 79 aa8.98□□□□□ -0.97
LTBR-205ENST00000535739 KMT2DO14686 5537 aa8.97□□□□□ -0.97
LTBR-205ENST00000535739 ATP5EP56381 51 aaPredicted RBP8.96□□□□□ -0.98
LTBR-205ENST00000535739 CHKB-CPT1BH3BT56 60 aa8.95□□□□□ -0.98
LTBR-205ENST00000535739 MDN1Q9NU22 5596 aa8.94□□□□□ -0.98
LTBR-205ENST00000535739 CRIPTQ9P021 101 aa8.94□□□□□ -0.98
LTBR-205ENST00000535739 COA5Q86WW8 74 aa8.92□□□□□ -0.98
LTBR-205ENST00000535739 SPTSSBQ8NFR3 76 aa8.87□□□□□ -0.99
LTBR-205ENST00000535739 H0YAA0 97 aa8.76□□□□□ -1.01
LTBR-205ENST00000535739 KRTAP2-3P0C7H8 128 aa8.72□□□□□ -1.01
LTBR-205ENST00000535739 KRTAP2-4Q9BYR9 128 aa8.72□□□□□ -1.01
LTBR-205ENST00000535739 SPRR2FQ96RM1 72 aa8.71□□□□□ -1.02
LTBR-205ENST00000535739 SERP1Q9Y6X1 66 aa8.71□□□□□ -1.02
LTBR-205ENST00000535739 ADM2Q7Z4H4 148 aa8.7□□□□□ -1.02
LTBR-205ENST00000535739 MT1XP80297 61 aa8.67□□□□□ -1.02
LTBR-205ENST00000535739 PRO2289Q9P1D8 64 aa8.66□□□□□ -1.02
LTBR-205ENST00000535739 SPRR2EP22531 72 aa8.65□□□□□ -1.02
LTBR-205ENST00000535739 SPRR2BP35325 72 aa8.65□□□□□ -1.02
LTBR-205ENST00000535739 SPRR2AP35326 72 aa8.65□□□□□ -1.02
LTBR-205ENST00000535739 PLAC4Q8WY50 150 aa8.58□□□□□ -1.04
LTBR-205ENST00000535739 P0C880 135 aa8.56□□□□□ -1.04
LTBR-205ENST00000535739 KRTAP8-1Q8IUC2 63 aa8.56□□□□□ -1.04
LTBR-205ENST00000535739 SEC61GP60059 68 aa8.54□□□□□ -1.04
LTBR-205ENST00000535739 RPS28P62857 69 aaKnown RBP8.53□□□□□ -1.04
LTBR-205ENST00000535739 LCE1AQ5T7P2 110 aa8.49□□□□□ -1.05
LTBR-205ENST00000535739 R4GN34 69 aa8.49□□□□□ -1.05
LTBR-205ENST00000535739 KRTAP12-2P59991 146 aa8.48□□□□□ -1.05
LTBR-205ENST00000535739 LINC01558Q9Y6Z2 57 aa8.46□□□□□ -1.06
LTBR-205ENST00000535739 A0A1B0GU69 56 aa8.45□□□□□ -1.06
LTBR-205ENST00000535739 SMIM26A0A096LP01 95 aa8.43□□□□□ -1.06
LTBR-205ENST00000535739 KRTAP4-8A0A0G2JLE6 195 aa8.42□□□□□ -1.06
LTBR-205ENST00000535739 M0QZ58 72 aa8.42□□□□□ -1.06
LTBR-205ENST00000535739 KRTAP4-8Q9BYQ9 185 aa8.42□□□□□ -1.06
LTBR-205ENST00000535739 KRTAP2-2Q9BYT5 123 aa8.42□□□□□ -1.06
LTBR-205ENST00000535739 KRTAP2-1Q9BYU5 128 aa8.42□□□□□ -1.06
LTBR-205ENST00000535739 PRR15LQ9BU68 103 aa8.39□□□□□ -1.07
LTBR-205ENST00000535739 V9GYY9 64 aa8.38□□□□□ -1.07
LTBR-205ENST00000535739 SPRR2DP22532 72 aa8.37□□□□□ -1.07
LTBR-205ENST00000535739 Q1T7F1 81 aa8.36□□□□□ -1.07
LTBR-205ENST00000535739 LINC01554Q52M75 96 aa8.34□□□□□ -1.07
LTBR-205ENST00000535739 A0A1B0GU33 70 aa8.33□□□□□ -1.08
LTBR-205ENST00000535739 KRTAP10-7P60409 375 aaPredicted RBP8.28□□□□□ -1.08
LTBR-205ENST00000535739 KRTAP13-4Q3LI77 160 aa8.25□□□□□ -1.09
LTBR-205ENST00000535739 PSPHP1O15172 72 aa8.23□□□□□ -1.09
LTBR-205ENST00000535739 KRTAP10-12P60413 245 aa8.21□□□□□ -1.1
LTBR-205ENST00000535739 SPATA8Q6RVD6 105 aa8.19□□□□□ -1.1
LTBR-205ENST00000535739 LCE3BQ5TA77 95 aa8.17□□□□□ -1.1
LTBR-205ENST00000535739 UQCR11O14957 56 aa8.13□□□□□ -1.11
LTBR-205ENST00000535739 A0A0D9SG42 100 aa8.09□□□□□ -1.11
LTBR-205ENST00000535739 A8MU10 97 aa8.02□□□□□ -1.13
LTBR-205ENST00000535739 MIR22HGQ0VDD5 57 aa8.01□□□□□ -1.13
LTBR-205ENST00000535739 A6NED7 52 aa7.98□□□□□ -1.13
LTBR-205ENST00000535739 SPINT4Q6UDR6 99 aa7.93□□□□□ -1.14
LTBR-205ENST00000535739 KRTAP12-1P59990 96 aa7.92□□□□□ -1.14
LTBR-205ENST00000535739 DSTQ03001 7570 aaKnown RBP7.82□□□□□ -1.16
LTBR-205ENST00000535739 CAMK2N1Q7Z7J9 78 aa7.82□□□□□ -1.16
LTBR-205ENST00000535739 CDC42SE1Q9NRR8 79 aa7.78□□□□□ -1.16
LTBR-205ENST00000535739 GPR98Q8WXG9 6306 aa7.75□□□□□ -1.17
LTBR-205ENST00000535739 LCE5AQ5TCM9 118 aa7.75□□□□□ -1.17
LTBR-205ENST00000535739 KRTAP19-7Q3SYF9 63 aa7.74□□□□□ -1.17
LTBR-205ENST00000535739 K7ERS5 55 aa7.73□□□□□ -1.17
LTBR-205ENST00000535739 MT1EP04732 61 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms