RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 A0A087WSZ3 146 aa4.69□□□□□ -1.66
SFSWAP-202ENST00000535202 MMP24-AS1A0A0U1RRL7 71 aa4.69□□□□□ -1.66
SFSWAP-202ENST00000535202 C9orf92A6NGG3 77 aa4.69□□□□□ -1.66
SFSWAP-202ENST00000535202 A0A0G2JQZ4 141 aa4.68□□□□□ -1.66
SFSWAP-202ENST00000535202 DEFB116Q30KQ4 102 aa4.66□□□□□ -1.66
SFSWAP-202ENST00000535202 PRAC1Q96KF2 57 aa4.66□□□□□ -1.66
SFSWAP-202ENST00000535202 ACYP2P14621 99 aa4.65□□□□□ -1.67
SFSWAP-202ENST00000535202 PCOTHQ58A44 107 aa4.65□□□□□ -1.67
SFSWAP-202ENST00000535202 UQCR11O14957 56 aa4.61□□□□□ -1.67
SFSWAP-202ENST00000535202 C8orf17Q9NRJ1 99 aa4.6□□□□□ -1.67
SFSWAP-202ENST00000535202 A0A1B0GU69 56 aa4.59□□□□□ -1.67
SFSWAP-202ENST00000535202 MIR22HGQ0VDD5 57 aa4.59□□□□□ -1.67
SFSWAP-202ENST00000535202 DMAC1Q96GE9 116 aa4.59□□□□□ -1.67
SFSWAP-202ENST00000535202 RPL37P61927 97 aaKnown RBP4.58□□□□□ -1.68
SFSWAP-202ENST00000535202 LCE2CQ5TA81 110 aa4.58□□□□□ -1.68
SFSWAP-202ENST00000535202 NOTCH2NLQ7Z3S9 236 aa4.58□□□□□ -1.68
SFSWAP-202ENST00000535202 ADM2Q7Z4H4 148 aa4.58□□□□□ -1.68
SFSWAP-202ENST00000535202 KRTAP19-2Q3LHN2 52 aa4.57□□□□□ -1.68
SFSWAP-202ENST00000535202 MRPL34Q9BQ48 92 aaKnown RBP4.57□□□□□ -1.68
SFSWAP-202ENST00000535202 KRTAP9-6A0A140TA67 174 aa4.56□□□□□ -1.68
SFSWAP-202ENST00000535202 A0A1B0GVX0 72 aa4.56□□□□□ -1.68
SFSWAP-202ENST00000535202 CSAG1Q6PB30 78 aa4.56□□□□□ -1.68
SFSWAP-202ENST00000535202 MT1HP80294 61 aa4.55□□□□□ -1.68
SFSWAP-202ENST00000535202 Q96NJ1 140 aa4.55□□□□□ -1.68
SFSWAP-202ENST00000535202 IGHV6-1A0A0B4J1U7 121 aa4.52□□□□□ -1.69
SFSWAP-202ENST00000535202 LCE2DQ5TA82 110 aaPredicted RBP4.52□□□□□ -1.69
SFSWAP-202ENST00000535202 COX6B2Q6YFQ2 88 aa4.51□□□□□ -1.69
SFSWAP-202ENST00000535202 ROMO1P60602 79 aa4.5□□□□□ -1.69
SFSWAP-202ENST00000535202 KRTAP25-1Q3LHN0 102 aa4.49□□□□□ -1.69
SFSWAP-202ENST00000535202 M0R2T5 61 aa4.48□□□□□ -1.69
SFSWAP-202ENST00000535202 KRTAP10-6P60371 365 aaPredicted RBP4.46□□□□□ -1.7
SFSWAP-202ENST00000535202 FLGP20930 4061 aaPredicted RBP4.45□□□□□ -1.7
SFSWAP-202ENST00000535202 LORP23490 312 aaPredicted RBP4.45□□□□□ -1.7
SFSWAP-202ENST00000535202 C20orf166-AS1Q96NR2 134 aa4.43□□□□□ -1.7
SFSWAP-202ENST00000535202 CRCT1Q9UGL9 99 aa4.43□□□□□ -1.7
SFSWAP-202ENST00000535202 A8MUU9 505 aa4.42□□□□□ -1.7
SFSWAP-202ENST00000535202 IGKV2-30P06310 120 aa4.41□□□□□ -1.7
SFSWAP-202ENST00000535202 Q5W150 140 aa4.41□□□□□ -1.7
SFSWAP-202ENST00000535202 FSIP2Q5CZC0 6907 aa4.38□□□□□ -1.71
SFSWAP-202ENST00000535202 IGKV2D-30A0A075B6S6 120 aa4.36□□□□□ -1.71
SFSWAP-202ENST00000535202 KRTAP16-1A8MUX0 517 aa4.36□□□□□ -1.71
SFSWAP-202ENST00000535202 K7ERS5 55 aa4.31□□□□□ -1.72
SFSWAP-202ENST00000535202 P0C880 135 aa4.3□□□□□ -1.72
SFSWAP-202ENST00000535202 H0YAA0 97 aa4.28□□□□□ -1.72
SFSWAP-202ENST00000535202 KRTAP9-8Q9BYQ0 159 aa4.28□□□□□ -1.72
SFSWAP-202ENST00000535202 A0A1B0GU33 70 aa4.25□□□□□ -1.73
SFSWAP-202ENST00000535202 H1FX-AS1Q4G0G2 97 aa4.24□□□□□ -1.73
SFSWAP-202ENST00000535202 MT2AP02795 61 aa4.23□□□□□ -1.73
SFSWAP-202ENST00000535202 USH2AO75445 5202 aa4.21□□□□□ -1.74
SFSWAP-202ENST00000535202 MT1FP04733 61 aa4.2□□□□□ -1.74
SFSWAP-202ENST00000535202 A0A0A0MQY5 61 aa4.18□□□□□ -1.74
SFSWAP-202ENST00000535202 KRTAP10-10P60014 251 aa4.18□□□□□ -1.74
SFSWAP-202ENST00000535202 KRTAP15-1Q3LI76 137 aa4.18□□□□□ -1.74
SFSWAP-202ENST00000535202 SSPOA2VEC9 5147 aa4.17□□□□□ -1.74
SFSWAP-202ENST00000535202 LCE2BO14633 110 aa4.15□□□□□ -1.75
SFSWAP-202ENST00000535202 SPINT4Q6UDR6 99 aa4.15□□□□□ -1.75
SFSWAP-202ENST00000535202 KRTAP9-3Q9BYQ3 159 aa4.15□□□□□ -1.75
SFSWAP-202ENST00000535202 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.13□□□□□ -1.75
SFSWAP-202ENST00000535202 NDUFAF8A1L188 74 aa4.11□□□□□ -1.75
SFSWAP-202ENST00000535202 KRTAP19-1Q8IUB9 90 aa4.11□□□□□ -1.75
SFSWAP-202ENST00000535202 KRTAP9-7A8MTY7 169 aa4.09□□□□□ -1.75
SFSWAP-202ENST00000535202 FCGBPQ9Y6R7 5405 aaPredicted RBP4.07□□□□□ -1.76
SFSWAP-202ENST00000535202 CRIPTQ9P021 101 aa4.04□□□□□ -1.76
SFSWAP-202ENST00000535202 KRTAP19-6Q3LI70 58 aa4.01□□□□□ -1.77
SFSWAP-202ENST00000535202 LUZP6Q538Z0 58 aa4□□□□□ -1.77
SFSWAP-202ENST00000535202 KRTAP3-1Q9BYR8 98 aa3.99□□□□□ -1.77
SFSWAP-202ENST00000535202 S4R3F8 94 aa3.94□□□□□ -1.78
SFSWAP-202ENST00000535202 MACF1Q9UPN3 7388 aaKnown RBP3.94□□□□□ -1.78
SFSWAP-202ENST00000535202 SYNE2Q8WXH0 6885 aaKnown RBP3.89□□□□□ -1.79
SFSWAP-202ENST00000535202 KRTAP3-2Q9BYR7 98 aa3.88□□□□□ -1.79
SFSWAP-202ENST00000535202 C10orf95Q9H7T3 257 aa3.87□□□□□ -1.79
SFSWAP-202ENST00000535202 KRTAP13-4Q3LI77 160 aa3.85□□□□□ -1.79
SFSWAP-202ENST00000535202 MT1BP07438 61 aa3.84□□□□□ -1.79
SFSWAP-202ENST00000535202 KRTAP6-3Q3LI67 103 aa3.84□□□□□ -1.79
SFSWAP-202ENST00000535202 SPRR2GQ9BYE4 73 aa3.83□□□□□ -1.8
SFSWAP-202ENST00000535202 A0A0D9SG42 100 aa3.82□□□□□ -1.8
SFSWAP-202ENST00000535202 KRTAP3-3Q9BYR6 98 aa3.82□□□□□ -1.8
SFSWAP-202ENST00000535202 M0QZ58 72 aa3.81□□□□□ -1.8
SFSWAP-202ENST00000535202 KRTAP12-1P59990 96 aa3.81□□□□□ -1.8
SFSWAP-202ENST00000535202 KRTAP19-8Q3LI54 63 aa3.81□□□□□ -1.8
SFSWAP-202ENST00000535202 PLAC4Q8WY50 150 aa3.8□□□□□ -1.8
SFSWAP-202ENST00000535202 KRTAP12-2P59991 146 aa3.79□□□□□ -1.8
SFSWAP-202ENST00000535202 KRTAP10-5P60370 271 aa3.76□□□□□ -1.81
SFSWAP-202ENST00000535202 CAMK2N1Q7Z7J9 78 aa3.76□□□□□ -1.81
SFSWAP-202ENST00000535202 PP632Q6XCG6 107 aa3.74□□□□□ -1.81
SFSWAP-202ENST00000535202 MUC12Q9UKN1 5478 aa3.7□□□□□ -1.82
SFSWAP-202ENST00000535202 NEBP20929 6669 aa3.68□□□□□ -1.82
SFSWAP-202ENST00000535202 KRTAP5-9P26371 169 aa3.63□□□□□ -1.83
SFSWAP-202ENST00000535202 PRO2289Q9P1D8 64 aa3.61□□□□□ -1.83
SFSWAP-202ENST00000535202 KRTAP23-1A1A580 65 aa3.6□□□□□ -1.83
SFSWAP-202ENST00000535202 KRTAP20-1Q3LI63 56 aa3.6□□□□□ -1.83
SFSWAP-202ENST00000535202 R4GN34 69 aa3.6□□□□□ -1.83
SFSWAP-202ENST00000535202 SPRR5A0A1B0GTR4 108 aa3.59□□□□□ -1.83
SFSWAP-202ENST00000535202 MT1XP80297 61 aa3.58□□□□□ -1.84
SFSWAP-202ENST00000535202 KMT2DO14686 5537 aa3.57□□□□□ -1.84
SFSWAP-202ENST00000535202 MDN1Q9NU22 5596 aa3.55□□□□□ -1.84
SFSWAP-202ENST00000535202 INE1O15225 51 aa3.54□□□□□ -1.84
SFSWAP-202ENST00000535202 SPRR2FQ96RM1 72 aa3.54□□□□□ -1.84
SFSWAP-202ENST00000535202 SPRR2EP22531 72 aa3.51□□□□□ -1.85
SFSWAP-202ENST00000535202 SPRR2BP35325 72 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms