RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 KRTAP5-9P26371 169 aa8.15□□□□□ -1.1
SSSCA1-206ENST00000531405 KLKP1Q107X0 134 aa8.12□□□□□ -1.11
SSSCA1-206ENST00000531405 UBL5Q9BZL1 73 aa8.05□□□□□ -1.12
SSSCA1-206ENST00000531405 KRTAP3-3Q9BYR6 98 aa8.04□□□□□ -1.12
SSSCA1-206ENST00000531405 LINC00643Q86TS7 51 aa8.03□□□□□ -1.12
SSSCA1-206ENST00000531405 IMUPQ9GZP8 106 aa8.03□□□□□ -1.12
SSSCA1-206ENST00000531405 ATP5EP2Q5VTU8 51 aa7.99□□□□□ -1.13
SSSCA1-206ENST00000531405 A0A087WVE0 104 aa7.97□□□□□ -1.13
SSSCA1-206ENST00000531405 CRIPTQ9P021 101 aa7.94□□□□□ -1.14
SSSCA1-206ENST00000531405 TP53AIP1Q9HCN2 124 aa7.93□□□□□ -1.14
SSSCA1-206ENST00000531405 MT-ATP8P03928 68 aa7.9□□□□□ -1.14
SSSCA1-206ENST00000531405 KRTAP2-3P0C7H8 128 aa7.9□□□□□ -1.14
SSSCA1-206ENST00000531405 KRTAP2-4Q9BYR9 128 aa7.9□□□□□ -1.14
SSSCA1-206ENST00000531405 CYP4F30PQ9H0H9 118 aa7.89□□□□□ -1.15
SSSCA1-206ENST00000531405 SPRR2FQ96RM1 72 aa7.86□□□□□ -1.15
SSSCA1-206ENST00000531405 SPRR2EP22531 72 aa7.83□□□□□ -1.16
SSSCA1-206ENST00000531405 SPRR2BP35325 72 aa7.83□□□□□ -1.16
SSSCA1-206ENST00000531405 SPRR2AP35326 72 aa7.83□□□□□ -1.16
SSSCA1-206ENST00000531405 HIST1H4AP62805 103 aaKnown RBP7.78□□□□□ -1.16
SSSCA1-206ENST00000531405 TRAV22A0A0B4J277 110 aa7.76□□□□□ -1.17
SSSCA1-206ENST00000531405 MT1XP80297 61 aa7.76□□□□□ -1.17
SSSCA1-206ENST00000531405 LOC101927531A0A1B0GV80 90 aa7.75□□□□□ -1.17
SSSCA1-206ENST00000531405 H0YAA0 97 aa7.75□□□□□ -1.17
SSSCA1-206ENST00000531405 NDUFC1O43677 76 aa7.74□□□□□ -1.17
SSSCA1-206ENST00000531405 PRO2289Q9P1D8 64 aa7.73□□□□□ -1.17
SSSCA1-206ENST00000531405 A8MUN3 132 aa7.72□□□□□ -1.17
SSSCA1-206ENST00000531405 ADM2Q7Z4H4 148 aa7.72□□□□□ -1.17
SSSCA1-206ENST00000531405 SCGB1A1P11684 91 aa7.71□□□□□ -1.18
SSSCA1-206ENST00000531405 KRTAP8-1Q8IUC2 63 aa7.7□□□□□ -1.18
SSSCA1-206ENST00000531405 LCE1AQ5T7P2 110 aa7.67□□□□□ -1.18
SSSCA1-206ENST00000531405 PLAC4Q8WY50 150 aa7.64□□□□□ -1.19
SSSCA1-206ENST00000531405 KRTAP2-2Q9BYT5 123 aa7.63□□□□□ -1.19
SSSCA1-206ENST00000531405 KRTAP2-1Q9BYU5 128 aa7.63□□□□□ -1.19
SSSCA1-206ENST00000531405 H0Y9P7 68 aa7.61□□□□□ -1.19
SSSCA1-206ENST00000531405 ATOX1O00244 68 aa7.61□□□□□ -1.19
SSSCA1-206ENST00000531405 SMIM20Q8N5G0 67 aa7.6□□□□□ -1.19
SSSCA1-206ENST00000531405 KRTAP12-2P59991 146 aa7.59□□□□□ -1.19
SSSCA1-206ENST00000531405 OCR1Q9BZK8 76 aa7.59□□□□□ -1.19
SSSCA1-206ENST00000531405 UQCRQO14949 82 aa7.57□□□□□ -1.2
SSSCA1-206ENST00000531405 SPRR2DP22532 72 aa7.57□□□□□ -1.2
SSSCA1-206ENST00000531405 KRTAP4-8A0A0G2JLE6 195 aa7.56□□□□□ -1.2
SSSCA1-206ENST00000531405 KRTAP4-8Q9BYQ9 185 aa7.56□□□□□ -1.2
SSSCA1-206ENST00000531405 TRAV7A0A075B6U4 112 aa7.55□□□□□ -1.2
SSSCA1-206ENST00000531405 R4GN34 69 aa7.53□□□□□ -1.2
SSSCA1-206ENST00000531405 P0C880 135 aa7.51□□□□□ -1.21
SSSCA1-206ENST00000531405 SERP2Q8N6R1 65 aa7.51□□□□□ -1.21
SSSCA1-206ENST00000531405 ANAPC13Q9BS18 74 aa7.48□□□□□ -1.21
SSSCA1-206ENST00000531405 M0QZ58 72 aa7.47□□□□□ -1.21
SSSCA1-206ENST00000531405 COX7CP15954 63 aa7.46□□□□□ -1.22
SSSCA1-206ENST00000531405 LINC00208Q96KT6 92 aa7.45□□□□□ -1.22
SSSCA1-206ENST00000531405 H3BPC8 53 aa7.43□□□□□ -1.22
SSSCA1-206ENST00000531405 KRTAP10-7P60409 375 aaPredicted RBP7.41□□□□□ -1.22
SSSCA1-206ENST00000531405 LINC01554Q52M75 96 aa7.41□□□□□ -1.22
SSSCA1-206ENST00000531405 C20orf197Q8N268 126 aa7.41□□□□□ -1.22
SSSCA1-206ENST00000531405 MP68P56378 58 aa7.39□□□□□ -1.23
SSSCA1-206ENST00000531405 LCE3BQ5TA77 95 aa7.39□□□□□ -1.23
SSSCA1-206ENST00000531405 KRTAP3-2Q9BYR7 98 aa7.37□□□□□ -1.23
SSSCA1-206ENST00000531405 KRTAP10-12P60413 245 aa7.34□□□□□ -1.23
SSSCA1-206ENST00000531405 PCP4P48539 62 aa7.33□□□□□ -1.24
SSSCA1-206ENST00000531405 CCDC179H3BU77 68 aa7.32□□□□□ -1.24
SSSCA1-206ENST00000531405 SNURFQ9Y675 71 aa7.27□□□□□ -1.25
SSSCA1-206ENST00000531405 DMAC1Q96GE9 116 aa7.25□□□□□ -1.25
SSSCA1-206ENST00000531405 CYSTM1Q9H1C7 97 aa7.23□□□□□ -1.25
SSSCA1-206ENST00000531405 H7BZZ5 65 aa7.21□□□□□ -1.26
SSSCA1-206ENST00000531405 SPANXA2-OT1Q8N9U9 137 aa7.17□□□□□ -1.26
SSSCA1-206ENST00000531405 GPR98Q8WXG9 6306 aa7.16□□□□□ -1.26
SSSCA1-206ENST00000531405 DSTQ03001 7570 aaKnown RBP7.15□□□□□ -1.26
SSSCA1-206ENST00000531405 TMEM258P61165 79 aa7.11□□□□□ -1.27
SSSCA1-206ENST00000531405 ATP5EP56381 51 aaPredicted RBP7.07□□□□□ -1.28
SSSCA1-206ENST00000531405 KRTAP4-9Q9BYQ8 210 aa7□□□□□ -1.29
SSSCA1-206ENST00000531405 ACYP2P14621 99 aa6.99□□□□□ -1.29
SSSCA1-206ENST00000531405 LCE5AQ5TCM9 118 aa6.96□□□□□ -1.3
SSSCA1-206ENST00000531405 SPTSSBQ8NFR3 76 aa6.96□□□□□ -1.3
SSSCA1-206ENST00000531405 KRTAP19-7Q3SYF9 63 aa6.94□□□□□ -1.3
SSSCA1-206ENST00000531405 MT1EP04732 61 aa6.89□□□□□ -1.31
SSSCA1-206ENST00000531405 KRTAP13-4Q3LI77 160 aa6.89□□□□□ -1.31
SSSCA1-206ENST00000531405 KRTAP19-3Q7Z4W3 81 aa6.89□□□□□ -1.31
SSSCA1-206ENST00000531405 SERP1Q9Y6X1 66 aa6.89□□□□□ -1.31
SSSCA1-206ENST00000531405 COA5Q86WW8 74 aa6.88□□□□□ -1.31
SSSCA1-206ENST00000531405 CHKB-CPT1BH3BT56 60 aa6.87□□□□□ -1.31
SSSCA1-206ENST00000531405 CAMK2N1Q7Z7J9 78 aa6.87□□□□□ -1.31
SSSCA1-206ENST00000531405 RPS28P62857 69 aaKnown RBP6.86□□□□□ -1.31
SSSCA1-206ENST00000531405 LCE1DQ5T752 114 aa6.78□□□□□ -1.32
SSSCA1-206ENST00000531405 HMCN1Q96RW7 5635 aa6.72□□□□□ -1.33
SSSCA1-206ENST00000531405 SMIM26A0A096LP01 95 aa6.68□□□□□ -1.34
SSSCA1-206ENST00000531405 MT4P47944 62 aa6.68□□□□□ -1.34
SSSCA1-206ENST00000531405 KRTAP19-5Q3LI72 72 aa6.68□□□□□ -1.34
SSSCA1-206ENST00000531405 A0A0D9SG42 100 aa6.67□□□□□ -1.34
SSSCA1-206ENST00000531405 MT1GP13640 62 aa6.67□□□□□ -1.34
SSSCA1-206ENST00000531405 LCE4AQ5TA78 99 aa6.63□□□□□ -1.35
SSSCA1-206ENST00000531405 AHNAK2Q8IVF2 5795 aa6.63□□□□□ -1.35
SSSCA1-206ENST00000531405 Q1T7F1 81 aa6.61□□□□□ -1.35
SSSCA1-206ENST00000531405 LINC01558Q9Y6Z2 57 aa6.61□□□□□ -1.35
SSSCA1-206ENST00000531405 PP632Q6XCG6 107 aa6.6□□□□□ -1.35
SSSCA1-206ENST00000531405 V9GYY9 64 aa6.6□□□□□ -1.35
SSSCA1-206ENST00000531405 MT1MQ8N339 61 aa6.59□□□□□ -1.35
SSSCA1-206ENST00000531405 SPATA8Q6RVD6 105 aa6.54□□□□□ -1.36
SSSCA1-206ENST00000531405 SPINT4Q6UDR6 99 aa6.54□□□□□ -1.36
SSSCA1-206ENST00000531405 MT1LQ93083 61 aa6.53□□□□□ -1.36
SSSCA1-206ENST00000531405 A0A1B0GU69 56 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 235 ms