RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 KRTAP15-1Q3LI76 137 aa3.68□□□□□ -1.82
ATPAF1-209ENST00000529214 C20orf166-AS1Q96NR2 134 aa3.68□□□□□ -1.82
ATPAF1-209ENST00000529214 SPRR4Q96PI1 79 aa3.68□□□□□ -1.82
ATPAF1-209ENST00000529214 PDE6GP18545 87 aa3.67□□□□□ -1.82
ATPAF1-209ENST00000529214 SPANXA2-OT1Q8N9U9 137 aa3.67□□□□□ -1.82
ATPAF1-209ENST00000529214 KRTAP13-2Q52LG2 175 aa3.67□□□□□ -1.82
ATPAF1-209ENST00000529214 LINC00483Q53H64 154 aa3.67□□□□□ -1.82
ATPAF1-209ENST00000529214 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.67□□□□□ -1.82
ATPAF1-209ENST00000529214 TYMSOSQ8TAI1 123 aa3.67□□□□□ -1.82
ATPAF1-209ENST00000529214 SMIM11BQ8TCY0 68 aa3.67□□□□□ -1.82
ATPAF1-209ENST00000529214 LOC110117498A0A087WWA1 95 aa3.66□□□□□ -1.82
ATPAF1-209ENST00000529214 COX7BP24311 80 aa3.66□□□□□ -1.82
ATPAF1-209ENST00000529214 SPINK7P58062 85 aa3.66□□□□□ -1.82
ATPAF1-209ENST00000529214 A0A1B0GVX0 72 aa3.65□□□□□ -1.83
ATPAF1-209ENST00000529214 IGKV2-30P06310 120 aa3.65□□□□□ -1.83
ATPAF1-209ENST00000529214 H0Y9P7 68 aa3.64□□□□□ -1.83
ATPAF1-209ENST00000529214 ST20-AS1Q8NBB2 130 aa3.64□□□□□ -1.83
ATPAF1-209ENST00000529214 HMCN2Q8NDA2 5059 aa3.64□□□□□ -1.83
ATPAF1-209ENST00000529214 SPRR1BP22528 89 aa3.62□□□□□ -1.83
ATPAF1-209ENST00000529214 KRTAP25-1Q3LHN0 102 aa3.62□□□□□ -1.83
ATPAF1-209ENST00000529214 SSBP3-AS1Q7Z2R9 100 aa3.62□□□□□ -1.83
ATPAF1-209ENST00000529214 NDUFAF8A1L188 74 aa3.61□□□□□ -1.83
ATPAF1-209ENST00000529214 H3BPC8 53 aa3.61□□□□□ -1.83
ATPAF1-209ENST00000529214 LINC00575Q6W349 94 aa3.61□□□□□ -1.83
ATPAF1-209ENST00000529214 LINC00304Q8N9R0 145 aa3.61□□□□□ -1.83
ATPAF1-209ENST00000529214 A8MUU9 505 aa3.6□□□□□ -1.83
ATPAF1-209ENST00000529214 DEFB105AQ8NG35 78 aa3.6□□□□□ -1.83
ATPAF1-209ENST00000529214 IGLV5-48A0A075B6I7 105 aa3.6□□□□□ -1.83
ATPAF1-209ENST00000529214 IGKV4-1P06312 121 aa3.6□□□□□ -1.83
ATPAF1-209ENST00000529214 H3BQ85 93 aa3.59□□□□□ -1.84
ATPAF1-209ENST00000529214 COA5Q86WW8 74 aa3.59□□□□□ -1.84
ATPAF1-209ENST00000529214 DMAC1Q96GE9 116 aa3.59□□□□□ -1.84
ATPAF1-209ENST00000529214 SPINK1P00995 79 aa3.58□□□□□ -1.84
ATPAF1-209ENST00000529214 Q6ZQY7 126 aa3.57□□□□□ -1.84
ATPAF1-209ENST00000529214 RPS29P62273 56 aaKnown RBP3.56□□□□□ -1.84
ATPAF1-209ENST00000529214 SPATA8Q6RVD6 105 aa3.56□□□□□ -1.84
ATPAF1-209ENST00000529214 LPAP08519 4548 aa3.55□□□□□ -1.84
ATPAF1-209ENST00000529214 LRP2P98164 4655 aa3.55□□□□□ -1.84
ATPAF1-209ENST00000529214 UQCR11O14957 56 aa3.54□□□□□ -1.84
ATPAF1-209ENST00000529214 UBR4Q5T4S7 5183 aa3.54□□□□□ -1.84
ATPAF1-209ENST00000529214 A0A0G2JQZ4 141 aa3.52□□□□□ -1.85
ATPAF1-209ENST00000529214 IGKV2D-30A0A075B6S6 120 aa3.51□□□□□ -1.85
ATPAF1-209ENST00000529214 IGFL1Q6UW32 110 aa3.5□□□□□ -1.85
ATPAF1-209ENST00000529214 TPRXLQ17RH7 258 aa3.49□□□□□ -1.85
ATPAF1-209ENST00000529214 Q5W150 140 aa3.49□□□□□ -1.85
ATPAF1-209ENST00000529214 SPINT4Q6UDR6 99 aa3.48□□□□□ -1.85
ATPAF1-209ENST00000529214 KRTAP13-3Q3SY46 172 aa3.47□□□□□ -1.85
ATPAF1-209ENST00000529214 Q8N9L7 120 aa3.47□□□□□ -1.85
ATPAF1-209ENST00000529214 RNF213Q63HN8 5207 aa3.45□□□□□ -1.86
ATPAF1-209ENST00000529214 A0A1B0GU69 56 aa3.43□□□□□ -1.86
ATPAF1-209ENST00000529214 LINC00472Q9H8W2 130 aa3.43□□□□□ -1.86
ATPAF1-209ENST00000529214 MUC17Q685J3 4493 aa3.43□□□□□ -1.86
ATPAF1-209ENST00000529214 C9orf92A6NGG3 77 aa3.41□□□□□ -1.86
ATPAF1-209ENST00000529214 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.41□□□□□ -1.86
ATPAF1-209ENST00000529214 MUC2Q02817 5179 aa3.4□□□□□ -1.86
ATPAF1-209ENST00000529214 A0A1B0GU33 70 aa3.4□□□□□ -1.87
ATPAF1-209ENST00000529214 Q96NJ1 140 aa3.4□□□□□ -1.87
ATPAF1-209ENST00000529214 DEFB116Q30KQ4 102 aa3.38□□□□□ -1.87
ATPAF1-209ENST00000529214 HRES1P13985 223 aa3.35□□□□□ -1.87
ATPAF1-209ENST00000529214 RPL37P61927 97 aaKnown RBP3.35□□□□□ -1.87
ATPAF1-209ENST00000529214 KRTAP4-1Q9BYQ7 146 aa3.35□□□□□ -1.87
ATPAF1-209ENST00000529214 PCOTHQ58A44 107 aa3.34□□□□□ -1.88
ATPAF1-209ENST00000529214 DSCR10P59022 87 aa3.32□□□□□ -1.88
ATPAF1-209ENST00000529214 K7EQZ3 153 aa3.3□□□□□ -1.88
ATPAF1-209ENST00000529214 ACYP2P14621 99 aa3.29□□□□□ -1.88
ATPAF1-209ENST00000529214 FAT4Q6V0I7 4981 aa3.29□□□□□ -1.88
ATPAF1-209ENST00000529214 WFDC13Q8IUB5 93 aa3.26□□□□□ -1.89
ATPAF1-209ENST00000529214 PRO2289Q9P1D8 64 aa3.26□□□□□ -1.89
ATPAF1-209ENST00000529214 KRTAP19-2Q3LHN2 52 aa3.25□□□□□ -1.89
ATPAF1-209ENST00000529214 MMP24-AS1A0A0U1RRL7 71 aa3.22□□□□□ -1.89
ATPAF1-209ENST00000529214 KRTAP5-11Q6L8G4 156 aa3.22□□□□□ -1.89
ATPAF1-209ENST00000529214 MRPL34Q9BQ48 92 aaKnown RBP3.22□□□□□ -1.89
ATPAF1-209ENST00000529214 TP53AIP1Q9HCN2 124 aa3.22□□□□□ -1.89
ATPAF1-209ENST00000529214 KRTAP10-7P60409 375 aaPredicted RBP3.21□□□□□ -1.9
ATPAF1-209ENST00000529214 R4GN34 69 aa3.2□□□□□ -1.9
ATPAF1-209ENST00000529214 MT1HP80294 61 aa3.18□□□□□ -1.9
ATPAF1-209ENST00000529214 COX6B2Q6YFQ2 88 aa3.17□□□□□ -1.9
ATPAF1-209ENST00000529214 CRIPTQ9P021 101 aa3.17□□□□□ -1.9
ATPAF1-209ENST00000529214 FLGP20930 4061 aaPredicted RBP3.15□□□□□ -1.91
ATPAF1-209ENST00000529214 M0R2T5 61 aa3.12□□□□□ -1.91
ATPAF1-209ENST00000529214 KRTAP10-6P60371 365 aaPredicted RBP3.1□□□□□ -1.91
ATPAF1-209ENST00000529214 H0YAA0 97 aa3.09□□□□□ -1.92
ATPAF1-209ENST00000529214 PLAC4Q8WY50 150 aa3.07□□□□□ -1.92
ATPAF1-209ENST00000529214 INE1O15225 51 aa3.04□□□□□ -1.92
ATPAF1-209ENST00000529214 H1FX-AS1Q4G0G2 97 aa3.04□□□□□ -1.92
ATPAF1-209ENST00000529214 MT3P25713 68 aa3.03□□□□□ -1.92
ATPAF1-209ENST00000529214 MT2AP02795 61 aa2.99□□□□□ -1.93
ATPAF1-209ENST00000529214 C10orf95Q9H7T3 257 aa2.98□□□□□ -1.93
ATPAF1-209ENST00000529214 MT1FP04733 61 aa2.96□□□□□ -1.93
ATPAF1-209ENST00000529214 FSIP2Q5CZC0 6907 aa2.96□□□□□ -1.94
ATPAF1-209ENST00000529214 KRTAP10-10P60014 251 aa2.96□□□□□ -1.94
ATPAF1-209ENST00000529214 LCE1EQ5T753 118 aa2.95□□□□□ -1.94
ATPAF1-209ENST00000529214 S4R3F8 94 aa2.95□□□□□ -1.94
ATPAF1-209ENST00000529214 LCE1AQ5T7P2 110 aa2.94□□□□□ -1.94
ATPAF1-209ENST00000529214 KRTAP5-1Q6L8H4 278 aa2.92□□□□□ -1.94
ATPAF1-209ENST00000529214 CRCT1Q9UGL9 99 aa2.91□□□□□ -1.94
ATPAF1-209ENST00000529214 KRTAP5-9P26371 169 aa2.9□□□□□ -1.95
ATPAF1-209ENST00000529214 USH2AO75445 5202 aa2.89□□□□□ -1.95
ATPAF1-209ENST00000529214 KRTAP5-4Q6L8H1 288 aa2.87□□□□□ -1.95
ATPAF1-209ENST00000529214 KRTAP12-2P59991 146 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms