RNA–Protein interactions for RNA: ENST00000527154.5

CHMP4A-203, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-203ENST00000527154 UBL5Q9BZL1 73 aa7.03□□□□□ -1.28
CHMP4A-203ENST00000527154 C7orf65Q6ZTY9 151 aa7.02□□□□□ -1.29
CHMP4A-203ENST00000527154 K7EQZ3 153 aa7.01□□□□□ -1.29
CHMP4A-203ENST00000527154 C5orf47Q569G3 176 aa7.01□□□□□ -1.29
CHMP4A-203ENST00000527154 SPRR2DP22532 72 aa6.99□□□□□ -1.29
CHMP4A-203ENST00000527154 KLKP1Q107X0 134 aa6.99□□□□□ -1.29
CHMP4A-203ENST00000527154 Q5W150 140 aa6.98□□□□□ -1.29
CHMP4A-203ENST00000527154 C4orf26Q17RF5 130 aa6.96□□□□□ -1.3
CHMP4A-203ENST00000527154 ETDBQ3ZM63 59 aa6.96□□□□□ -1.3
CHMP4A-203ENST00000527154 IMUPQ9GZP8 106 aa6.95□□□□□ -1.3
CHMP4A-203ENST00000527154 KRTAP8-1Q8IUC2 63 aa6.93□□□□□ -1.3
CHMP4A-203ENST00000527154 ACYP1P07311 99 aa6.91□□□□□ -1.3
CHMP4A-203ENST00000527154 CXCL6P80162 114 aa6.91□□□□□ -1.3
CHMP4A-203ENST00000527154 CSAG1Q6PB30 78 aa6.91□□□□□ -1.3
CHMP4A-203ENST00000527154 CASC2Q6XLA1 102 aa6.91□□□□□ -1.3
CHMP4A-203ENST00000527154 KRTAP3-1Q9BYR8 98 aa6.91□□□□□ -1.3
CHMP4A-203ENST00000527154 Q8N9L7 120 aa6.89□□□□□ -1.31
CHMP4A-203ENST00000527154 FAM240AA0A1B0GVK7 77 aa6.88□□□□□ -1.31
CHMP4A-203ENST00000527154 HCG22E2RYF7 251 aa6.88□□□□□ -1.31
CHMP4A-203ENST00000527154 LCE3BQ5TA77 95 aa6.88□□□□□ -1.31
CHMP4A-203ENST00000527154 CRIPTQ9P021 101 aa6.86□□□□□ -1.31
CHMP4A-203ENST00000527154 S4R3F8 94 aa6.86□□□□□ -1.31
CHMP4A-203ENST00000527154 LCA10Q71F78 164 aa6.85□□□□□ -1.31
CHMP4A-203ENST00000527154 KRTAP12-2P59991 146 aa6.84□□□□□ -1.31
CHMP4A-203ENST00000527154 MT1XP80297 61 aa6.84□□□□□ -1.31
CHMP4A-203ENST00000527154 ATP5EP2Q5VTU8 51 aa6.83□□□□□ -1.32
CHMP4A-203ENST00000527154 DSTQ03001 7570 aaKnown RBP6.79□□□□□ -1.32
CHMP4A-203ENST00000527154 TP53AIP1Q9HCN2 124 aa6.79□□□□□ -1.32
CHMP4A-203ENST00000527154 PRO2289Q9P1D8 64 aa6.79□□□□□ -1.32
CHMP4A-203ENST00000527154 C1orf64Q8NEQ6 169 aa6.78□□□□□ -1.32
CHMP4A-203ENST00000527154 KRTAP4-8A0A0G2JLE6 195 aa6.73□□□□□ -1.33
CHMP4A-203ENST00000527154 KRTAP4-8Q9BYQ9 185 aa6.73□□□□□ -1.33
CHMP4A-203ENST00000527154 ANAPC13Q9BS18 74 aa6.72□□□□□ -1.33
CHMP4A-203ENST00000527154 MT-ATP8P03928 68 aa6.71□□□□□ -1.34
CHMP4A-203ENST00000527154 LINC00643Q86TS7 51 aa6.71□□□□□ -1.34
CHMP4A-203ENST00000527154 HIST1H4AP62805 103 aaKnown RBP6.66□□□□□ -1.34
CHMP4A-203ENST00000527154 TRAV22A0A0B4J277 110 aa6.63□□□□□ -1.35
CHMP4A-203ENST00000527154 UQCRQO14949 82 aa6.61□□□□□ -1.35
CHMP4A-203ENST00000527154 LOC101927531A0A1B0GV80 90 aa6.59□□□□□ -1.35
CHMP4A-203ENST00000527154 H0YAA0 97 aa6.59□□□□□ -1.35
CHMP4A-203ENST00000527154 ATOX1O00244 68 aa6.59□□□□□ -1.35
CHMP4A-203ENST00000527154 A0A087WVE0 104 aa6.56□□□□□ -1.36
CHMP4A-203ENST00000527154 KRTAP4-9Q9BYQ8 210 aa6.55□□□□□ -1.36
CHMP4A-203ENST00000527154 CYP4F30PQ9H0H9 118 aa6.55□□□□□ -1.36
CHMP4A-203ENST00000527154 CCDC179H3BU77 68 aa6.53□□□□□ -1.36
CHMP4A-203ENST00000527154 A8MUN3 132 aa6.52□□□□□ -1.37
CHMP4A-203ENST00000527154 H0Y9P7 68 aa6.52□□□□□ -1.37
CHMP4A-203ENST00000527154 KRTAP10-12P60413 245 aa6.51□□□□□ -1.37
CHMP4A-203ENST00000527154 SMIM20Q8N5G0 67 aa6.5□□□□□ -1.37
CHMP4A-203ENST00000527154 PLAC4Q8WY50 150 aa6.5□□□□□ -1.37
CHMP4A-203ENST00000527154 RPS28P62857 69 aaKnown RBP6.49□□□□□ -1.37
CHMP4A-203ENST00000527154 KRTAP10-7P60409 375 aaPredicted RBP6.48□□□□□ -1.37
CHMP4A-203ENST00000527154 MP68P56378 58 aa6.47□□□□□ -1.37
CHMP4A-203ENST00000527154 OCR1Q9BZK8 76 aa6.47□□□□□ -1.37
CHMP4A-203ENST00000527154 NDUFC1O43677 76 aa6.46□□□□□ -1.38
CHMP4A-203ENST00000527154 H3BPC8 53 aa6.44□□□□□ -1.38
CHMP4A-203ENST00000527154 HMCN1Q96RW7 5635 aa6.43□□□□□ -1.38
CHMP4A-203ENST00000527154 COX7CP15954 63 aa6.43□□□□□ -1.38
CHMP4A-203ENST00000527154 ADM2Q7Z4H4 148 aa6.41□□□□□ -1.38
CHMP4A-203ENST00000527154 LINC00208Q96KT6 92 aa6.41□□□□□ -1.38
CHMP4A-203ENST00000527154 AHNAK2Q8IVF2 5795 aa6.38□□□□□ -1.39
CHMP4A-203ENST00000527154 LCE1DQ5T752 114 aa6.38□□□□□ -1.39
CHMP4A-203ENST00000527154 TMEM258P61165 79 aa6.36□□□□□ -1.39
CHMP4A-203ENST00000527154 LCE5AQ5TCM9 118 aa6.34□□□□□ -1.39
CHMP4A-203ENST00000527154 SERP2Q8N6R1 65 aa6.34□□□□□ -1.39
CHMP4A-203ENST00000527154 KRTAP5-10Q6L8G5 202 aa6.33□□□□□ -1.4
CHMP4A-203ENST00000527154 TRAV7A0A075B6U4 112 aa6.28□□□□□ -1.4
CHMP4A-203ENST00000527154 R4GN34 69 aa6.28□□□□□ -1.4
CHMP4A-203ENST00000527154 DMAC1Q96GE9 116 aa6.23□□□□□ -1.41
CHMP4A-203ENST00000527154 P0C880 135 aa6.22□□□□□ -1.41
CHMP4A-203ENST00000527154 M0QZ58 72 aa6.21□□□□□ -1.42
CHMP4A-203ENST00000527154 LCE4AQ5TA78 99 aa6.2□□□□□ -1.42
CHMP4A-203ENST00000527154 C20orf197Q8N268 126 aa6.2□□□□□ -1.42
CHMP4A-203ENST00000527154 KRTAP19-3Q7Z4W3 81 aa6.18□□□□□ -1.42
CHMP4A-203ENST00000527154 KRTAP5-7Q6L8G8 165 aa6.17□□□□□ -1.42
CHMP4A-203ENST00000527154 SERP1Q9Y6X1 66 aa6.17□□□□□ -1.42
CHMP4A-203ENST00000527154 LINC01554Q52M75 96 aa6.16□□□□□ -1.42
CHMP4A-203ENST00000527154 ATP5EP56381 51 aaPredicted RBP6.15□□□□□ -1.42
CHMP4A-203ENST00000527154 KRTAP19-7Q3SYF9 63 aa6.15□□□□□ -1.42
CHMP4A-203ENST00000527154 MT4P47944 62 aa6.14□□□□□ -1.43
CHMP4A-203ENST00000527154 H3BS24 57 aa6.13□□□□□ -1.43
CHMP4A-203ENST00000527154 CYSTM1Q9H1C7 97 aa6.13□□□□□ -1.43
CHMP4A-203ENST00000527154 ACYP2P14621 99 aa6.12□□□□□ -1.43
CHMP4A-203ENST00000527154 SMIM26A0A096LP01 95 aa6.11□□□□□ -1.43
CHMP4A-203ENST00000527154 MT1EP04732 61 aa6.1□□□□□ -1.43
CHMP4A-203ENST00000527154 H7BZZ5 65 aa6.09□□□□□ -1.43
CHMP4A-203ENST00000527154 PRO0628Q9UI54 55 aa6.09□□□□□ -1.43
CHMP4A-203ENST00000527154 SPTSSBQ8NFR3 76 aa6.08□□□□□ -1.44
CHMP4A-203ENST00000527154 SPANXA2-OT1Q8N9U9 137 aa6.07□□□□□ -1.44
CHMP4A-203ENST00000527154 SNURFQ9Y675 71 aa6.06□□□□□ -1.44
CHMP4A-203ENST00000527154 KRTAP5-4Q6L8H1 288 aa6.05□□□□□ -1.44
CHMP4A-203ENST00000527154 CHKB-CPT1BH3BT56 60 aa6□□□□□ -1.45
CHMP4A-203ENST00000527154 KRTAP5-3Q6L8H2 238 aa5.99□□□□□ -1.45
CHMP4A-203ENST00000527154 KRTAP4-6Q9BYQ5 205 aa5.98□□□□□ -1.45
CHMP4A-203ENST00000527154 MT1GP13640 62 aa5.95□□□□□ -1.46
CHMP4A-203ENST00000527154 LOC100996750A0A140TA64 210 aa5.89□□□□□ -1.47
CHMP4A-203ENST00000527154 Q1T7F1 81 aa5.85□□□□□ -1.47
CHMP4A-203ENST00000527154 PP632Q6XCG6 107 aa5.85□□□□□ -1.47
CHMP4A-203ENST00000527154 MT1MQ8N339 61 aa5.85□□□□□ -1.47
CHMP4A-203ENST00000527154 V9GYY9 64 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms