RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 MRPL34Q9BQ48 92 aaKnown RBP0.48□□□□□ -2.33
CD44-212ENST00000524922 C10orf95Q9H7T3 257 aa0.48□□□□□ -2.33
CD44-212ENST00000524922 C8orf17Q9NRJ1 99 aa0.48□□□□□ -2.33
CD44-212ENST00000524922 HSPB8Q9UJY1 196 aa0.48□□□□□ -2.33
CD44-212ENST00000524922 R4GN34 69 aa0.48□□□□□ -2.33
CD44-212ENST00000524922 A6NDN8 102 aa0.47□□□□□ -2.33
CD44-212ENST00000524922 HCG22E2RYF7 251 aa0.47□□□□□ -2.33
CD44-212ENST00000524922 H3BMG7 143 aa0.47□□□□□ -2.33
CD44-212ENST00000524922 TMEM256-PLSCR3K7ERE1 68 aa0.47□□□□□ -2.33
CD44-212ENST00000524922 TRACP01848 142 aa0.47□□□□□ -2.33
CD44-212ENST00000524922 Q6ZQT0 140 aa0.47□□□□□ -2.33
CD44-212ENST00000524922 ANKRD29Q8N6D5 301 aa0.47□□□□□ -2.33
CD44-212ENST00000524922 MT1LQ93083 61 aa0.47□□□□□ -2.33
CD44-212ENST00000524922 TRAPPC1Q9Y5R8 145 aa0.47□□□□□ -2.33
CD44-212ENST00000524922 SYNE1Q8NF91 8797 aaKnown RBP0.47□□□□□ -2.33
CD44-212ENST00000524922 MMP24-AS1A0A0U1RRL7 71 aa0.46□□□□□ -2.34
CD44-212ENST00000524922 H3BUT2 72 aa0.46□□□□□ -2.34
CD44-212ENST00000524922 NDUFC1O43677 76 aa0.46□□□□□ -2.34
CD44-212ENST00000524922 HSBP1O75506 76 aa0.46□□□□□ -2.34
CD44-212ENST00000524922 CCKP06307 115 aa0.46□□□□□ -2.34
CD44-212ENST00000524922 LYRM7Q5U5X0 104 aa0.46□□□□□ -2.34
CD44-212ENST00000524922 TP53AIP1Q9HCN2 124 aa0.46□□□□□ -2.34
CD44-212ENST00000524922 LOC110117498A0A087WWA1 95 aa0.45□□□□□ -2.34
CD44-212ENST00000524922 A0A0B4J2C4 111 aa0.45□□□□□ -2.34
CD44-212ENST00000524922 TSTD3H0UI37 97 aa0.45□□□□□ -2.34
CD44-212ENST00000524922 JMJD7-PLA2G4BH0Y9G9 81 aa0.45□□□□□ -2.34
CD44-212ENST00000524922 M0QZ58 72 aa0.45□□□□□ -2.34
CD44-212ENST00000524922 SCGB1D4Q6XE38 83 aa0.45□□□□□ -2.34
CD44-212ENST00000524922 C1orf64Q8NEQ6 169 aa0.45□□□□□ -2.34
CD44-212ENST00000524922 ORMDL1Q9P0S3 153 aa0.45□□□□□ -2.34
CD44-212ENST00000524922 LOC101927531A0A1B0GV80 90 aa0.44□□□□□ -2.34
CD44-212ENST00000524922 SYS1-DBNDD2H3BUS1 97 aa0.44□□□□□ -2.34
CD44-212ENST00000524922 DNAL4O96015 105 aa0.44□□□□□ -2.34
CD44-212ENST00000524922 MUSTN1Q8IVN3 82 aa0.44□□□□□ -2.34
CD44-212ENST00000524922 HIGD1BQ9P298 99 aa0.44□□□□□ -2.34
CD44-212ENST00000524922 MUC16Q8WXI7 14507 aa0.44□□□□□ -2.34
CD44-212ENST00000524922 TMEM218A2RU14 115 aa0.43□□□□□ -2.34
CD44-212ENST00000524922 DLEU1O43261 78 aa0.43□□□□□ -2.34
CD44-212ENST00000524922 FABP4P15090 132 aa0.43□□□□□ -2.34
CD44-212ENST00000524922 KRTAP12-1P59990 96 aa0.43□□□□□ -2.34
CD44-212ENST00000524922 SPINT4Q6UDR6 99 aa0.43□□□□□ -2.34
CD44-212ENST00000524922 HIST3H2BBQ8N257 126 aa0.43□□□□□ -2.34
CD44-212ENST00000524922 HIST1H2BLQ99880 126 aa0.43□□□□□ -2.34
CD44-212ENST00000524922 C9JAW5 83 aa0.42□□□□□ -2.34
CD44-212ENST00000524922 ATOX1O00244 68 aa0.42□□□□□ -2.34
CD44-212ENST00000524922 MT1AP04731 61 aa0.42□□□□□ -2.34
CD44-212ENST00000524922 COX6CP09669 75 aa0.42□□□□□ -2.34
CD44-212ENST00000524922 FABP2P12104 132 aa0.42□□□□□ -2.34
CD44-212ENST00000524922 PMCHL1Q16048 86 aa0.42□□□□□ -2.34
CD44-212ENST00000524922 KRTAP19-5Q3LI72 72 aa0.42□□□□□ -2.34
CD44-212ENST00000524922 ADM2Q7Z4H4 148 aa0.42□□□□□ -2.34
CD44-212ENST00000524922 A0A087WVE0 104 aa0.41□□□□□ -2.34
CD44-212ENST00000524922 TRAV22A0A0B4J277 110 aa0.41□□□□□ -2.34
CD44-212ENST00000524922 ACYP1P07311 99 aa0.41□□□□□ -2.34
CD44-212ENST00000524922 CLLU1Q5K131 121 aa0.41□□□□□ -2.34
CD44-212ENST00000524922 SVBPQ8N300 66 aa0.41□□□□□ -2.34
CD44-212ENST00000524922 A0A0D9SG42 100 aa0.4□□□□□ -2.35
CD44-212ENST00000524922 NDUFS5O43920 106 aa0.4□□□□□ -2.35
CD44-212ENST00000524922 NREPQ16612 68 aa0.4□□□□□ -2.35
CD44-212ENST00000524922 CASC2Q6XLA1 102 aa0.4□□□□□ -2.35
CD44-212ENST00000524922 VAMP8Q9BV40 100 aa0.4□□□□□ -2.35
CD44-212ENST00000524922 CYP4F30PQ9H0H9 118 aa0.4□□□□□ -2.35
CD44-212ENST00000524922 TRAV7A0A075B6U4 112 aa0.39□□□□□ -2.35
CD44-212ENST00000524922 BPY2O14599 106 aa0.39□□□□□ -2.35
CD44-212ENST00000524922 MT-ATP8P03928 68 aa0.39□□□□□ -2.35
CD44-212ENST00000524922 KRTDAPP60985 99 aa0.39□□□□□ -2.35
CD44-212ENST00000524922 NDUFA5Q16718 116 aa0.39□□□□□ -2.35
CD44-212ENST00000524922 PRO1854Q9UHT4 67 aa0.39□□□□□ -2.35
CD44-212ENST00000524922 HSBP1L1C9JCN9 74 aa0.38□□□□□ -2.35
CD44-212ENST00000524922 H0Y8G0 127 aa0.38□□□□□ -2.35
CD44-212ENST00000524922 KRTAP6-2Q3LI66 62 aa0.38□□□□□ -2.35
CD44-212ENST00000524922 SPTSSBQ8NFR3 76 aa0.38□□□□□ -2.35
CD44-212ENST00000524922 DMAC1Q96GE9 116 aa0.38□□□□□ -2.35
CD44-212ENST00000524922 PMCHL2Q9BQD1 86 aa0.38□□□□□ -2.35
CD44-212ENST00000524922 TTTY13Q9BZ97 58 aa0.38□□□□□ -2.35
CD44-212ENST00000524922 A0A1W2PPM0 123 aa0.37□□□□□ -2.35
CD44-212ENST00000524922 H3BPC8 53 aa0.37□□□□□ -2.35
CD44-212ENST00000524922 K7EP34 96 aa0.37□□□□□ -2.35
CD44-212ENST00000524922 TNP1P09430 55 aa0.37□□□□□ -2.35
CD44-212ENST00000524922 COX8AP10176 69 aa0.37□□□□□ -2.35
CD44-212ENST00000524922 KRTAP6-1Q3LI64 71 aa0.37□□□□□ -2.35
CD44-212ENST00000524922 VPS25Q9BRG1 176 aa0.37□□□□□ -2.35
CD44-212ENST00000524922 PHGR1C9JFL3 82 aa0.36□□□□□ -2.35
CD44-212ENST00000524922 H3BT86 120 aa0.36□□□□□ -2.35
CD44-212ENST00000524922 UQCRQO14949 82 aa0.36□□□□□ -2.35
CD44-212ENST00000524922 HIST1H2BKO60814 126 aa0.36□□□□□ -2.35
CD44-212ENST00000524922 HIST1H2BJP06899 126 aa0.36□□□□□ -2.35
CD44-212ENST00000524922 HIST1H2BOP23527 126 aa0.36□□□□□ -2.35
CD44-212ENST00000524922 HIST1H2BBP33778 126 aa0.36□□□□□ -2.35
CD44-212ENST00000524922 HIST1H2BDP58876 126 aa0.36□□□□□ -2.35
CD44-212ENST00000524922 HIST1H2BCP62807 126 aa0.36□□□□□ -2.35
CD44-212ENST00000524922 ATXN8Q156A1 80 aa0.36□□□□□ -2.35
CD44-212ENST00000524922 BATFQ16520 125 aa0.36□□□□□ -2.35
CD44-212ENST00000524922 HIST2H2BEQ16778 126 aa0.36□□□□□ -2.35
CD44-212ENST00000524922 LINC01554Q52M75 96 aa0.36□□□□□ -2.35
CD44-212ENST00000524922 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.36□□□□□ -2.35
CD44-212ENST00000524922 SPANXA2-OT1Q8N9U9 137 aa0.36□□□□□ -2.35
CD44-212ENST00000524922 HIST1H2BHQ93079 126 aa0.36□□□□□ -2.35
CD44-212ENST00000524922 HIST1H2BNQ99877 126 aa0.36□□□□□ -2.35
CD44-212ENST00000524922 HIST1H2BMQ99879 126 aa0.36□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 231.8 ms