RNA–Protein interactions for RNA: ENST00000523685.5

CTNNA1-239, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-239ENST00000523685 SSPOA2VEC9 5147 aa2.7□□□□□ -1.98
CTNNA1-239ENST00000523685 LOC110117498A0A087WWA1 95 aa2.7□□□□□ -1.98
CTNNA1-239ENST00000523685 SEC61GP60059 68 aa2.7□□□□□ -1.98
CTNNA1-239ENST00000523685 SMIM11BQ8TCY0 68 aa2.7□□□□□ -1.98
CTNNA1-239ENST00000523685 UBL5Q9BZL1 73 aa2.7□□□□□ -1.98
CTNNA1-239ENST00000523685 IGLV5-48A0A075B6I7 105 aa2.69□□□□□ -1.98
CTNNA1-239ENST00000523685 TRBV7-6A0A0J9YX20 115 aa2.69□□□□□ -1.98
CTNNA1-239ENST00000523685 TRBV7-4A0A0J9YYF1 115 aa2.69□□□□□ -1.98
CTNNA1-239ENST00000523685 F8WEM9 126 aa2.69□□□□□ -1.98
CTNNA1-239ENST00000523685 H3BQ85 93 aa2.68□□□□□ -1.98
CTNNA1-239ENST00000523685 TMEM256-PLSCR3K7ERE1 68 aa2.68□□□□□ -1.98
CTNNA1-239ENST00000523685 PDE6GP18545 87 aa2.68□□□□□ -1.98
CTNNA1-239ENST00000523685 PRR15Q8IV56 129 aa2.68□□□□□ -1.98
CTNNA1-239ENST00000523685 Q96NJ1 140 aa2.68□□□□□ -1.98
CTNNA1-239ENST00000523685 Q6ZQT0 140 aa2.67□□□□□ -1.98
CTNNA1-239ENST00000523685 FCGBPQ9Y6R7 5405 aaPredicted RBP2.66□□□□□ -1.98
CTNNA1-239ENST00000523685 RBM3P98179 157 aaKnown RBP2.66□□□□□ -1.98
CTNNA1-239ENST00000523685 Q8N9L7 120 aa2.66□□□□□ -1.98
CTNNA1-239ENST00000523685 BRK1Q8WUW1 75 aa2.66□□□□□ -1.98
CTNNA1-239ENST00000523685 NREPQ16612 68 aa2.65□□□□□ -1.99
CTNNA1-239ENST00000523685 IGFL1Q6UW32 110 aa2.65□□□□□ -1.99
CTNNA1-239ENST00000523685 TMEM254Q8TBM7 123 aa2.65□□□□□ -1.99
CTNNA1-239ENST00000523685 SYNE2Q8WXH0 6885 aaKnown RBP2.65□□□□□ -1.99
CTNNA1-239ENST00000523685 MT2AP02795 61 aa2.64□□□□□ -1.99
CTNNA1-239ENST00000523685 Q6ZQY7 126 aa2.64□□□□□ -1.99
CTNNA1-239ENST00000523685 SNURFQ9Y675 71 aa2.64□□□□□ -1.99
CTNNA1-239ENST00000523685 KRTAP10-10P60014 251 aa2.63□□□□□ -1.99
CTNNA1-239ENST00000523685 PMAIP1Q13794 54 aa2.63□□□□□ -1.99
CTNNA1-239ENST00000523685 LINC00575Q6W349 94 aa2.63□□□□□ -1.99
CTNNA1-239ENST00000523685 MT1FP04733 61 aa2.62□□□□□ -1.99
CTNNA1-239ENST00000523685 Q1T7F1 81 aa2.62□□□□□ -1.99
CTNNA1-239ENST00000523685 CAMK2N1Q7Z7J9 78 aa2.62□□□□□ -1.99
CTNNA1-239ENST00000523685 hDV103S1A0JD37 113 aa2.61□□□□□ -1.99
CTNNA1-239ENST00000523685 A8MUU9 505 aa2.61□□□□□ -1.99
CTNNA1-239ENST00000523685 BPY2O14599 106 aa2.61□□□□□ -1.99
CTNNA1-239ENST00000523685 C20orf166-AS1Q96NR2 134 aa2.61□□□□□ -1.99
CTNNA1-239ENST00000523685 MACF1Q9UPN3 7388 aaKnown RBP2.61□□□□□ -1.99
CTNNA1-239ENST00000523685 IGKV4-1P06312 121 aa2.6□□□□□ -1.99
CTNNA1-239ENST00000523685 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.6□□□□□ -1.99
CTNNA1-239ENST00000523685 CYP4F30PQ9H0H9 118 aa2.6□□□□□ -1.99
CTNNA1-239ENST00000523685 A0A087WSZ3 146 aa2.59□□□□□ -1.99
CTNNA1-239ENST00000523685 A0A1B0GW54 56 aa2.59□□□□□ -1.99
CTNNA1-239ENST00000523685 ZCCHC13Q8WW36 166 aaKnown RBP2.59□□□□□ -1.99
CTNNA1-239ENST00000523685 RBM12B-AS1Q9P1G2 102 aa2.59□□□□□ -1.99
CTNNA1-239ENST00000523685 LINC00313P59037 77 aa2.57□□□□□ -2
CTNNA1-239ENST00000523685 KTN1-AS1Q86SY8 53 aa2.57□□□□□ -2
CTNNA1-239ENST00000523685 TRAV22A0A0B4J277 110 aa2.56□□□□□ -2
CTNNA1-239ENST00000523685 HRES1P13985 223 aa2.56□□□□□ -2
CTNNA1-239ENST00000523685 NDUFB1O75438 58 aa2.55□□□□□ -2
CTNNA1-239ENST00000523685 DEFB116Q30KQ4 102 aa2.55□□□□□ -2
CTNNA1-239ENST00000523685 C1orf64Q8NEQ6 169 aa2.55□□□□□ -2
CTNNA1-239ENST00000523685 IGHV6-1A0A0B4J1U7 121 aa2.54□□□□□ -2
CTNNA1-239ENST00000523685 NDUFS5O43920 106 aa2.54□□□□□ -2
CTNNA1-239ENST00000523685 KRTAP19-6Q3LI70 58 aa2.54□□□□□ -2
CTNNA1-239ENST00000523685 Q5VV11 94 aa2.54□□□□□ -2
CTNNA1-239ENST00000523685 SPANXA2-OT1Q8N9U9 137 aa2.54□□□□□ -2
CTNNA1-239ENST00000523685 A0A1W2PNM2 257 aa2.53□□□□□ -2
CTNNA1-239ENST00000523685 KRTAP5-2Q701N4 177 aa2.53□□□□□ -2
CTNNA1-239ENST00000523685 H3BPC8 53 aa2.52□□□□□ -2.01
CTNNA1-239ENST00000523685 LOC101927531A0A1B0GV80 90 aa2.51□□□□□ -2.01
CTNNA1-239ENST00000523685 A6NN06 94 aa2.51□□□□□ -2.01
CTNNA1-239ENST00000523685 PSPHP1O15172 72 aa2.51□□□□□ -2.01
CTNNA1-239ENST00000523685 KRTAP6-3Q3LI67 103 aa2.51□□□□□ -2.01
CTNNA1-239ENST00000523685 A8MUN3 132 aa2.5□□□□□ -2.01
CTNNA1-239ENST00000523685 A8MWP4 228 aa2.5□□□□□ -2.01
CTNNA1-239ENST00000523685 HCG22E2RYF7 251 aa2.5□□□□□ -2.01
CTNNA1-239ENST00000523685 SPINK7P58062 85 aa2.5□□□□□ -2.01
CTNNA1-239ENST00000523685 C7orf65Q6ZTY9 151 aa2.5□□□□□ -2.01
CTNNA1-239ENST00000523685 NEBP20929 6669 aa2.5□□□□□ -2.01
CTNNA1-239ENST00000523685 MP68P56378 58 aa2.49□□□□□ -2.01
CTNNA1-239ENST00000523685 LINC00208Q96KT6 92 aa2.49□□□□□ -2.01
CTNNA1-239ENST00000523685 LINC00472Q9H8W2 130 aa2.49□□□□□ -2.01
CTNNA1-239ENST00000523685 CDC42SE1Q9NRR8 79 aa2.49□□□□□ -2.01
CTNNA1-239ENST00000523685 A0A1B0GVX0 72 aa2.48□□□□□ -2.01
CTNNA1-239ENST00000523685 CHKB-CPT1BH3BT56 60 aa2.48□□□□□ -2.01
CTNNA1-239ENST00000523685 WFDC13Q8IUB5 93 aa2.48□□□□□ -2.01
CTNNA1-239ENST00000523685 C8orf87E5RJ46 101 aa2.47□□□□□ -2.01
CTNNA1-239ENST00000523685 K7EQZ3 153 aa2.47□□□□□ -2.01
CTNNA1-239ENST00000523685 LCA10Q71F78 164 aa2.47□□□□□ -2.01
CTNNA1-239ENST00000523685 PRR15LQ9BU68 103 aa2.47□□□□□ -2.01
CTNNA1-239ENST00000523685 A6NED7 52 aa2.45□□□□□ -2.02
CTNNA1-239ENST00000523685 KRTAP4-3Q9BYR4 195 aa2.45□□□□□ -2.02
CTNNA1-239ENST00000523685 LINC01558Q9Y6Z2 57 aa2.45□□□□□ -2.02
CTNNA1-239ENST00000523685 H0Y9P7 68 aa2.44□□□□□ -2.02
CTNNA1-239ENST00000523685 COA5Q86WW8 74 aa2.44□□□□□ -2.02
CTNNA1-239ENST00000523685 OBSCNQ5VST9 7968 aa2.43□□□□□ -2.02
CTNNA1-239ENST00000523685 CASC2Q6XLA1 102 aa2.43□□□□□ -2.02
CTNNA1-239ENST00000523685 SPTSSBQ8NFR3 76 aa2.43□□□□□ -2.02
CTNNA1-239ENST00000523685 MUC12Q9UKN1 5478 aa2.43□□□□□ -2.02
CTNNA1-239ENST00000523685 KRTAP20-1Q3LI63 56 aa2.42□□□□□ -2.02
CTNNA1-239ENST00000523685 H1FX-AS1Q4G0G2 97 aa2.42□□□□□ -2.02
CTNNA1-239ENST00000523685 LCE3AQ5TA76 89 aa2.42□□□□□ -2.02
CTNNA1-239ENST00000523685 C8orf17Q9NRJ1 99 aa2.42□□□□□ -2.02
CTNNA1-239ENST00000523685 MMP24-AS1A0A0U1RRL7 71 aa2.39□□□□□ -2.03
CTNNA1-239ENST00000523685 Q5W150 140 aa2.39□□□□□ -2.03
CTNNA1-239ENST00000523685 TP53AIP1Q9HCN2 124 aa2.39□□□□□ -2.03
CTNNA1-239ENST00000523685 LINC01554Q52M75 96 aa2.38□□□□□ -2.03
CTNNA1-239ENST00000523685 MRPL34Q9BQ48 92 aaKnown RBP2.37□□□□□ -2.03
CTNNA1-239ENST00000523685 MT1BP07438 61 aa2.36□□□□□ -2.03
CTNNA1-239ENST00000523685 MDN1Q9NU22 5596 aa2.34□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 1127.1 ms