RNA–Protein interactions for RNA: ENST00000523147.5

PTP4A3-205, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5

Gene PTP4A3, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-205ENST00000523147 A0A087WVE0 104 aa9.4□□□□□ -0.9
PTP4A3-205ENST00000523147 A6NN06 94 aa9.38□□□□□ -0.91
PTP4A3-205ENST00000523147 LINC00643Q86TS7 51 aa9.38□□□□□ -0.91
PTP4A3-205ENST00000523147 MT1BP07438 61 aa9.37□□□□□ -0.91
PTP4A3-205ENST00000523147 KRTAP19-8Q3LI54 63 aa9.36□□□□□ -0.91
PTP4A3-205ENST00000523147 NDUFC1O43677 76 aa9.34□□□□□ -0.91
PTP4A3-205ENST00000523147 IMUPQ9GZP8 106 aa9.33□□□□□ -0.92
PTP4A3-205ENST00000523147 KRTAP6-3Q3LI67 103 aa9.32□□□□□ -0.92
PTP4A3-205ENST00000523147 CRIPTQ9P021 101 aa9.32□□□□□ -0.92
PTP4A3-205ENST00000523147 LINC00208Q96KT6 92 aa9.29□□□□□ -0.92
PTP4A3-205ENST00000523147 A8MUN3 132 aa9.27□□□□□ -0.93
PTP4A3-205ENST00000523147 MP68P56378 58 aa9.26□□□□□ -0.93
PTP4A3-205ENST00000523147 A0A1B0GV90 55 aa9.22□□□□□ -0.93
PTP4A3-205ENST00000523147 H0YAA0 97 aa9.2□□□□□ -0.94
PTP4A3-205ENST00000523147 KRTAP10-5P60370 271 aa9.19□□□□□ -0.94
PTP4A3-205ENST00000523147 OCR1Q9BZK8 76 aa9.19□□□□□ -0.94
PTP4A3-205ENST00000523147 ADM2Q7Z4H4 148 aa9.15□□□□□ -0.94
PTP4A3-205ENST00000523147 J3QR89 54 aa9.14□□□□□ -0.95
PTP4A3-205ENST00000523147 SCGB1A1P11684 91 aa9.09□□□□□ -0.95
PTP4A3-205ENST00000523147 H3BPC8 53 aa9.07□□□□□ -0.96
PTP4A3-205ENST00000523147 C20orf197Q8N268 126 aa8.96□□□□□ -0.98
PTP4A3-205ENST00000523147 DMAC1Q96GE9 116 aa8.96□□□□□ -0.98
PTP4A3-205ENST00000523147 R4GN34 69 aa8.95□□□□□ -0.98
PTP4A3-205ENST00000523147 PLAC4Q8WY50 150 aa8.93□□□□□ -0.98
PTP4A3-205ENST00000523147 PRO2289Q9P1D8 64 aa8.92□□□□□ -0.98
PTP4A3-205ENST00000523147 NEBP20929 6669 aa8.9□□□□□ -0.98
PTP4A3-205ENST00000523147 MUC12Q9UKN1 5478 aa8.9□□□□□ -0.99
PTP4A3-205ENST00000523147 P0C880 135 aa8.89□□□□□ -0.99
PTP4A3-205ENST00000523147 M0QZ58 72 aa8.86□□□□□ -0.99
PTP4A3-205ENST00000523147 KRTAP5-9P26371 169 aa8.85□□□□□ -0.99
PTP4A3-205ENST00000523147 TRAV7A0A075B6U4 112 aa8.8□□□□□ -1
PTP4A3-205ENST00000523147 ACYP2P14621 99 aa8.79□□□□□ -1
PTP4A3-205ENST00000523147 MT1XP80297 61 aa8.78□□□□□ -1
PTP4A3-205ENST00000523147 SMIM20Q8N5G0 67 aa8.78□□□□□ -1
PTP4A3-205ENST00000523147 LINC01554Q52M75 96 aa8.77□□□□□ -1.01
PTP4A3-205ENST00000523147 MT-ATP8P03928 68 aa8.76□□□□□ -1.01
PTP4A3-205ENST00000523147 KRTAP3-2Q9BYR7 98 aa8.76□□□□□ -1.01
PTP4A3-205ENST00000523147 K7ERU9 68 aa8.74□□□□□ -1.01
PTP4A3-205ENST00000523147 SPTSSBQ8NFR3 76 aa8.73□□□□□ -1.01
PTP4A3-205ENST00000523147 KMT2DO14686 5537 aa8.73□□□□□ -1.01
PTP4A3-205ENST00000523147 KRTAP20-1Q3LI63 56 aa8.69□□□□□ -1.02
PTP4A3-205ENST00000523147 CHKB-CPT1BH3BT56 60 aa8.67□□□□□ -1.02
PTP4A3-205ENST00000523147 MDN1Q9NU22 5596 aa8.66□□□□□ -1.02
PTP4A3-205ENST00000523147 SPRR2FQ96RM1 72 aa8.65□□□□□ -1.02
PTP4A3-205ENST00000523147 KRTAP8-1Q8IUC2 63 aa8.61□□□□□ -1.03
PTP4A3-205ENST00000523147 KRTAP12-2P59991 146 aa8.6□□□□□ -1.03
PTP4A3-205ENST00000523147 SNURFQ9Y675 71 aa8.59□□□□□ -1.03
PTP4A3-205ENST00000523147 SPRR2EP22531 72 aa8.53□□□□□ -1.04
PTP4A3-205ENST00000523147 SPRR2BP35325 72 aa8.53□□□□□ -1.04
PTP4A3-205ENST00000523147 SPRR2AP35326 72 aa8.53□□□□□ -1.04
PTP4A3-205ENST00000523147 SPANXA2-OT1Q8N9U9 137 aa8.47□□□□□ -1.05
PTP4A3-205ENST00000523147 KRTAP2-3P0C7H8 128 aa8.45□□□□□ -1.06
PTP4A3-205ENST00000523147 KRTAP2-4Q9BYR9 128 aa8.45□□□□□ -1.06
PTP4A3-205ENST00000523147 KRTAP4-8A0A0G2JLE6 195 aa8.44□□□□□ -1.06
PTP4A3-205ENST00000523147 KRTAP4-8Q9BYQ9 185 aa8.44□□□□□ -1.06
PTP4A3-205ENST00000523147 SERP2Q8N6R1 65 aa8.43□□□□□ -1.06
PTP4A3-205ENST00000523147 KRTAP10-7P60409 375 aaPredicted RBP8.4□□□□□ -1.06
PTP4A3-205ENST00000523147 LCE1AQ5T7P2 110 aa8.36□□□□□ -1.07
PTP4A3-205ENST00000523147 KRTAP10-12P60413 245 aa8.35□□□□□ -1.07
PTP4A3-205ENST00000523147 KRTAP13-4Q3LI77 160 aa8.26□□□□□ -1.09
PTP4A3-205ENST00000523147 SPRR2DP22532 72 aa8.25□□□□□ -1.09
PTP4A3-205ENST00000523147 CAMK2N1Q7Z7J9 78 aa8.25□□□□□ -1.09
PTP4A3-205ENST00000523147 COA5Q86WW8 74 aa8.25□□□□□ -1.09
PTP4A3-205ENST00000523147 SEC61GP60059 68 aa8.22□□□□□ -1.09
PTP4A3-205ENST00000523147 SERP1Q9Y6X1 66 aa8.19□□□□□ -1.1
PTP4A3-205ENST00000523147 KRTAP2-2Q9BYT5 123 aa8.18□□□□□ -1.1
PTP4A3-205ENST00000523147 KRTAP2-1Q9BYU5 128 aa8.18□□□□□ -1.1
PTP4A3-205ENST00000523147 COX7CP15954 63 aa8.14□□□□□ -1.11
PTP4A3-205ENST00000523147 A0A0D9SG42 100 aa8.09□□□□□ -1.11
PTP4A3-205ENST00000523147 A0A1B0GU33 70 aa8.03□□□□□ -1.12
PTP4A3-205ENST00000523147 LCE3BQ5TA77 95 aa8.03□□□□□ -1.12
PTP4A3-205ENST00000523147 SPATA8Q6RVD6 105 aa8.03□□□□□ -1.12
PTP4A3-205ENST00000523147 H7BZZ5 65 aa8.01□□□□□ -1.13
PTP4A3-205ENST00000523147 SPINT4Q6UDR6 99 aa8□□□□□ -1.13
PTP4A3-205ENST00000523147 CYSTM1Q9H1C7 97 aa7.97□□□□□ -1.13
PTP4A3-205ENST00000523147 A0A1B0GU69 56 aa7.88□□□□□ -1.15
PTP4A3-205ENST00000523147 KRTAP12-1P59990 96 aa7.86□□□□□ -1.15
PTP4A3-205ENST00000523147 ANAPC13Q9BS18 74 aa7.85□□□□□ -1.15
PTP4A3-205ENST00000523147 KRTAP19-7Q3SYF9 63 aa7.84□□□□□ -1.15
PTP4A3-205ENST00000523147 SMIM26A0A096LP01 95 aa7.82□□□□□ -1.16
PTP4A3-205ENST00000523147 MT1EP04732 61 aa7.8□□□□□ -1.16
PTP4A3-205ENST00000523147 LCE5AQ5TCM9 118 aa7.76□□□□□ -1.17
PTP4A3-205ENST00000523147 KRTAP19-3Q7Z4W3 81 aa7.76□□□□□ -1.17
PTP4A3-205ENST00000523147 A8MU10 97 aa7.71□□□□□ -1.18
PTP4A3-205ENST00000523147 KRTAP19-5Q3LI72 72 aa7.68□□□□□ -1.18
PTP4A3-205ENST00000523147 CCDC179H3BU77 68 aa7.66□□□□□ -1.18
PTP4A3-205ENST00000523147 DSTQ03001 7570 aaKnown RBP7.65□□□□□ -1.18
PTP4A3-205ENST00000523147 PRR15LQ9BU68 103 aa7.65□□□□□ -1.18
PTP4A3-205ENST00000523147 ATP5EP56381 51 aaPredicted RBP7.62□□□□□ -1.19
PTP4A3-205ENST00000523147 MT1GP13640 62 aa7.58□□□□□ -1.2
PTP4A3-205ENST00000523147 TNP1P09430 55 aa7.57□□□□□ -1.2
PTP4A3-205ENST00000523147 PP632Q6XCG6 107 aa7.57□□□□□ -1.2
PTP4A3-205ENST00000523147 C10orf95Q9H7T3 257 aa7.51□□□□□ -1.21
PTP4A3-205ENST00000523147 LCE3AQ5TA76 89 aa7.48□□□□□ -1.21
PTP4A3-205ENST00000523147 LINC01558Q9Y6Z2 57 aa7.48□□□□□ -1.21
PTP4A3-205ENST00000523147 KRTAP4-9Q9BYQ8 210 aa7.47□□□□□ -1.21
PTP4A3-205ENST00000523147 MT1LQ93083 61 aa7.44□□□□□ -1.22
PTP4A3-205ENST00000523147 MT1MQ8N339 61 aa7.43□□□□□ -1.22
PTP4A3-205ENST00000523147 TMEM258P61165 79 aa7.38□□□□□ -1.23
PTP4A3-205ENST00000523147 UQCR11O14957 56 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms