RNA–Protein interactions for RNA: ENST00000521683.5

CTNNA1-229, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-229ENST00000521683 LCE5AQ5TCM9 118 aa4.06□□□□□ -1.76
CTNNA1-229ENST00000521683 ACYP1P07311 99 aa4.05□□□□□ -1.76
CTNNA1-229ENST00000521683 C4orf26Q17RF5 130 aa4.05□□□□□ -1.76
CTNNA1-229ENST00000521683 FAM240AA0A1B0GVK7 77 aa4.04□□□□□ -1.76
CTNNA1-229ENST00000521683 A6NN06 94 aa4.04□□□□□ -1.76
CTNNA1-229ENST00000521683 HCG22E2RYF7 251 aa4.04□□□□□ -1.76
CTNNA1-229ENST00000521683 CASC2Q6XLA1 102 aa4.04□□□□□ -1.76
CTNNA1-229ENST00000521683 MDN1Q9NU22 5596 aa4.03□□□□□ -1.76
CTNNA1-229ENST00000521683 FAM236AA0A1B0GUQ0 79 aa4.03□□□□□ -1.76
CTNNA1-229ENST00000521683 FAM236BA0A1B0GV22 79 aa4.03□□□□□ -1.76
CTNNA1-229ENST00000521683 MT1BP07438 61 aa4.03□□□□□ -1.76
CTNNA1-229ENST00000521683 CXCL6P80162 114 aa4.03□□□□□ -1.76
CTNNA1-229ENST00000521683 C5orf47Q569G3 176 aa4.03□□□□□ -1.76
CTNNA1-229ENST00000521683 PCP4P48539 62 aa4.02□□□□□ -1.77
CTNNA1-229ENST00000521683 KRTAP19-8Q3LI54 63 aa4.02□□□□□ -1.77
CTNNA1-229ENST00000521683 Q5VV11 94 aa4.02□□□□□ -1.77
CTNNA1-229ENST00000521683 Q8N9L7 120 aa4.02□□□□□ -1.77
CTNNA1-229ENST00000521683 SPRR2GQ9BYE4 73 aa4.01□□□□□ -1.77
CTNNA1-229ENST00000521683 S4R3F8 94 aa4□□□□□ -1.77
CTNNA1-229ENST00000521683 KMT2DO14686 5537 aa4□□□□□ -1.77
CTNNA1-229ENST00000521683 CSAG1Q6PB30 78 aa3.99□□□□□ -1.77
CTNNA1-229ENST00000521683 KRTAP10-5P60370 271 aa3.98□□□□□ -1.77
CTNNA1-229ENST00000521683 LCA10Q71F78 164 aa3.97□□□□□ -1.77
CTNNA1-229ENST00000521683 IMUPQ9GZP8 106 aa3.97□□□□□ -1.77
CTNNA1-229ENST00000521683 C1orf64Q8NEQ6 169 aa3.96□□□□□ -1.78
CTNNA1-229ENST00000521683 KRTAP5-9P26371 169 aa3.95□□□□□ -1.78
CTNNA1-229ENST00000521683 KLKP1Q107X0 134 aa3.95□□□□□ -1.78
CTNNA1-229ENST00000521683 LINC00643Q86TS7 51 aa3.94□□□□□ -1.78
CTNNA1-229ENST00000521683 UBL5Q9BZL1 73 aa3.94□□□□□ -1.78
CTNNA1-229ENST00000521683 KRTAP20-1Q3LI63 56 aa3.93□□□□□ -1.78
CTNNA1-229ENST00000521683 TP53AIP1Q9HCN2 124 aa3.92□□□□□ -1.78
CTNNA1-229ENST00000521683 MT-ATP8P03928 68 aa3.91□□□□□ -1.78
CTNNA1-229ENST00000521683 ATP5EP2Q5VTU8 51 aa3.9□□□□□ -1.79
CTNNA1-229ENST00000521683 CRIPTQ9P021 101 aa3.9□□□□□ -1.79
CTNNA1-229ENST00000521683 KRTAP15-1Q3LI76 137 aa3.86□□□□□ -1.79
CTNNA1-229ENST00000521683 ANAPC13Q9BS18 74 aa3.86□□□□□ -1.79
CTNNA1-229ENST00000521683 CYP4F30PQ9H0H9 118 aa3.85□□□□□ -1.79
CTNNA1-229ENST00000521683 H0YAA0 97 aa3.83□□□□□ -1.8
CTNNA1-229ENST00000521683 A0A087WVE0 104 aa3.82□□□□□ -1.8
CTNNA1-229ENST00000521683 TRAV22A0A0B4J277 110 aa3.82□□□□□ -1.8
CTNNA1-229ENST00000521683 LOC101927531A0A1B0GV80 90 aa3.82□□□□□ -1.8
CTNNA1-229ENST00000521683 ATOX1O00244 68 aa3.82□□□□□ -1.8
CTNNA1-229ENST00000521683 SMIM20Q8N5G0 67 aa3.81□□□□□ -1.8
CTNNA1-229ENST00000521683 KRTAP2-3P0C7H8 128 aa3.8□□□□□ -1.8
CTNNA1-229ENST00000521683 HIST1H4AP62805 103 aaKnown RBP3.8□□□□□ -1.8
CTNNA1-229ENST00000521683 KRTAP2-4Q9BYR9 128 aa3.8□□□□□ -1.8
CTNNA1-229ENST00000521683 UQCRQO14949 82 aa3.79□□□□□ -1.8
CTNNA1-229ENST00000521683 NDUFC1O43677 76 aa3.78□□□□□ -1.8
CTNNA1-229ENST00000521683 PRO2289Q9P1D8 64 aa3.78□□□□□ -1.8
CTNNA1-229ENST00000521683 A0A0A0MQY5 61 aa3.77□□□□□ -1.81
CTNNA1-229ENST00000521683 A8MUN3 132 aa3.76□□□□□ -1.81
CTNNA1-229ENST00000521683 COX7CP15954 63 aa3.76□□□□□ -1.81
CTNNA1-229ENST00000521683 SERP2Q8N6R1 65 aa3.76□□□□□ -1.81
CTNNA1-229ENST00000521683 SPRR2FQ96RM1 72 aa3.76□□□□□ -1.81
CTNNA1-229ENST00000521683 SPRR2EP22531 72 aa3.75□□□□□ -1.81
CTNNA1-229ENST00000521683 SPRR2BP35325 72 aa3.75□□□□□ -1.81
CTNNA1-229ENST00000521683 SPRR2AP35326 72 aa3.75□□□□□ -1.81
CTNNA1-229ENST00000521683 MT1XP80297 61 aa3.74□□□□□ -1.81
CTNNA1-229ENST00000521683 ADM2Q7Z4H4 148 aa3.73□□□□□ -1.81
CTNNA1-229ENST00000521683 TRAV7A0A075B6U4 112 aa3.72□□□□□ -1.81
CTNNA1-229ENST00000521683 H0Y9P7 68 aa3.72□□□□□ -1.81
CTNNA1-229ENST00000521683 CCDC179H3BU77 68 aa3.71□□□□□ -1.82
CTNNA1-229ENST00000521683 KRTAP12-2P59991 146 aa3.71□□□□□ -1.82
CTNNA1-229ENST00000521683 KRTAP8-1Q8IUC2 63 aa3.71□□□□□ -1.82
CTNNA1-229ENST00000521683 PLAC4Q8WY50 150 aa3.71□□□□□ -1.82
CTNNA1-229ENST00000521683 TMEM258P61165 79 aa3.68□□□□□ -1.82
CTNNA1-229ENST00000521683 LCE1AQ5T7P2 110 aa3.68□□□□□ -1.82
CTNNA1-229ENST00000521683 RPS28P62857 69 aaKnown RBP3.67□□□□□ -1.82
CTNNA1-229ENST00000521683 KRTAP2-2Q9BYT5 123 aa3.67□□□□□ -1.82
CTNNA1-229ENST00000521683 KRTAP2-1Q9BYU5 128 aa3.67□□□□□ -1.82
CTNNA1-229ENST00000521683 R4GN34 69 aa3.67□□□□□ -1.82
CTNNA1-229ENST00000521683 C20orf197Q8N268 126 aa3.66□□□□□ -1.82
CTNNA1-229ENST00000521683 ATP5EP56381 51 aaPredicted RBP3.64□□□□□ -1.83
CTNNA1-229ENST00000521683 LINC00208Q96KT6 92 aa3.64□□□□□ -1.83
CTNNA1-229ENST00000521683 P0C880 135 aa3.63□□□□□ -1.83
CTNNA1-229ENST00000521683 SPRR2DP22532 72 aa3.63□□□□□ -1.83
CTNNA1-229ENST00000521683 M0QZ58 72 aa3.62□□□□□ -1.83
CTNNA1-229ENST00000521683 MP68P56378 58 aa3.61□□□□□ -1.83
CTNNA1-229ENST00000521683 OCR1Q9BZK8 76 aa3.61□□□□□ -1.83
CTNNA1-229ENST00000521683 H3BPC8 53 aa3.6□□□□□ -1.83
CTNNA1-229ENST00000521683 H7BZZ5 65 aa3.57□□□□□ -1.84
CTNNA1-229ENST00000521683 DMAC1Q96GE9 116 aa3.57□□□□□ -1.84
CTNNA1-229ENST00000521683 SERP1Q9Y6X1 66 aa3.57□□□□□ -1.84
CTNNA1-229ENST00000521683 KRTAP10-7P60409 375 aaPredicted RBP3.56□□□□□ -1.84
CTNNA1-229ENST00000521683 KRTAP10-12P60413 245 aa3.56□□□□□ -1.84
CTNNA1-229ENST00000521683 LINC01554Q52M75 96 aa3.56□□□□□ -1.84
CTNNA1-229ENST00000521683 SNURFQ9Y675 71 aa3.53□□□□□ -1.84
CTNNA1-229ENST00000521683 CYSTM1Q9H1C7 97 aa3.52□□□□□ -1.85
CTNNA1-229ENST00000521683 SPANXA2-OT1Q8N9U9 137 aa3.51□□□□□ -1.85
CTNNA1-229ENST00000521683 GPR98Q8WXG9 6306 aa3.51□□□□□ -1.85
CTNNA1-229ENST00000521683 SMIM26A0A096LP01 95 aa3.5□□□□□ -1.85
CTNNA1-229ENST00000521683 DSTQ03001 7570 aaKnown RBP3.46□□□□□ -1.85
CTNNA1-229ENST00000521683 SPTSSBQ8NFR3 76 aa3.45□□□□□ -1.86
CTNNA1-229ENST00000521683 V9GYY9 64 aa3.45□□□□□ -1.86
CTNNA1-229ENST00000521683 ACYP2P14621 99 aa3.44□□□□□ -1.86
CTNNA1-229ENST00000521683 Q1T7F1 81 aa3.4□□□□□ -1.87
CTNNA1-229ENST00000521683 CHKB-CPT1BH3BT56 60 aa3.37□□□□□ -1.87
CTNNA1-229ENST00000521683 KRTAP19-7Q3SYF9 63 aa3.35□□□□□ -1.87
CTNNA1-229ENST00000521683 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.34□□□□□ -1.87
CTNNA1-229ENST00000521683 KRTAP19-3Q7Z4W3 81 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms