RNA–Protein interactions for RNA: ENST00000518043.5

CPS1-210, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 2

Gene CPS1, Length 585 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-210ENST00000518043 KRTAP10-5P60370 271 aa3.6□□□□□ -1.83
CPS1-210ENST00000518043 SERP2Q8N6R1 65 aa3.6□□□□□ -1.83
CPS1-210ENST00000518043 TP53AIP1Q9HCN2 124 aa3.6□□□□□ -1.83
CPS1-210ENST00000518043 KRTAP4-1Q9BYQ7 146 aa3.59□□□□□ -1.83
CPS1-210ENST00000518043 TRAV22A0A0B4J277 110 aa3.58□□□□□ -1.84
CPS1-210ENST00000518043 PCOTHQ58A44 107 aa3.58□□□□□ -1.84
CPS1-210ENST00000518043 KRTAP5-11Q6L8G4 156 aa3.58□□□□□ -1.84
CPS1-210ENST00000518043 SMIM20Q8N5G0 67 aa3.58□□□□□ -1.84
CPS1-210ENST00000518043 A0A0U1RQV1 116 aa3.57□□□□□ -1.84
CPS1-210ENST00000518043 H0Y9P7 68 aa3.57□□□□□ -1.84
CPS1-210ENST00000518043 ANAPC13Q9BS18 74 aa3.57□□□□□ -1.84
CPS1-210ENST00000518043 CYSTM1Q9H1C7 97 aa3.57□□□□□ -1.84
CPS1-210ENST00000518043 COX7CP15954 63 aa3.56□□□□□ -1.84
CPS1-210ENST00000518043 LCE3CQ5T5A8 94 aa3.56□□□□□ -1.84
CPS1-210ENST00000518043 CCDC179H3BU77 68 aa3.55□□□□□ -1.84
CPS1-210ENST00000518043 C5orf47Q569G3 176 aa3.55□□□□□ -1.84
CPS1-210ENST00000518043 ATP11AUNQ6ZP68 121 aa3.54□□□□□ -1.84
CPS1-210ENST00000518043 KLKP1Q107X0 134 aa3.53□□□□□ -1.84
CPS1-210ENST00000518043 C20orf197Q8N268 126 aa3.53□□□□□ -1.84
CPS1-210ENST00000518043 LINC00208Q96KT6 92 aa3.53□□□□□ -1.84
CPS1-210ENST00000518043 CYP4F30PQ9H0H9 118 aa3.53□□□□□ -1.84
CPS1-210ENST00000518043 LOC101927531A0A1B0GV80 90 aa3.52□□□□□ -1.85
CPS1-210ENST00000518043 H3BPC8 53 aa3.52□□□□□ -1.85
CPS1-210ENST00000518043 HRES1P13985 223 aa3.52□□□□□ -1.85
CPS1-210ENST00000518043 MP68P56378 58 aa3.52□□□□□ -1.85
CPS1-210ENST00000518043 SPINK7P58062 85 aa3.52□□□□□ -1.85
CPS1-210ENST00000518043 C1orf64Q8NEQ6 169 aa3.52□□□□□ -1.85
CPS1-210ENST00000518043 SNURFQ9Y675 71 aa3.52□□□□□ -1.85
CPS1-210ENST00000518043 KRTAP19-2Q3LHN2 52 aa3.51□□□□□ -1.85
CPS1-210ENST00000518043 C7orf65Q6ZTY9 151 aa3.5□□□□□ -1.85
CPS1-210ENST00000518043 MUC2Q02817 5179 aa3.5□□□□□ -1.85
CPS1-210ENST00000518043 FAT4Q6V0I7 4981 aa3.49□□□□□ -1.85
CPS1-210ENST00000518043 H7BZZ5 65 aa3.48□□□□□ -1.85
CPS1-210ENST00000518043 C4orf26Q17RF5 130 aa3.44□□□□□ -1.86
CPS1-210ENST00000518043 NDUFC1O43677 76 aa3.42□□□□□ -1.86
CPS1-210ENST00000518043 COX6B2Q6YFQ2 88 aa3.42□□□□□ -1.86
CPS1-210ENST00000518043 SPANXA2-OT1Q8N9U9 137 aa3.42□□□□□ -1.86
CPS1-210ENST00000518043 DMAC1Q96GE9 116 aa3.41□□□□□ -1.86
CPS1-210ENST00000518043 FLGP20930 4061 aaPredicted RBP3.4□□□□□ -1.86
CPS1-210ENST00000518043 TMEM258P61165 79 aa3.38□□□□□ -1.87
CPS1-210ENST00000518043 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.38□□□□□ -1.87
CPS1-210ENST00000518043 FAM236DA0A1B0GTK5 79 aa3.37□□□□□ -1.87
CPS1-210ENST00000518043 FAM236CP0DP71 79 aa3.37□□□□□ -1.87
CPS1-210ENST00000518043 RBM12B-AS1Q9P1G2 102 aa3.36□□□□□ -1.87
CPS1-210ENST00000518043 A8MU10 97 aa3.35□□□□□ -1.87
CPS1-210ENST00000518043 A8MUN3 132 aa3.35□□□□□ -1.87
CPS1-210ENST00000518043 H1FX-AS1Q4G0G2 97 aa3.35□□□□□ -1.87
CPS1-210ENST00000518043 KRTAP9-6A8MVA2 160 aa3.34□□□□□ -1.87
CPS1-210ENST00000518043 MT1HP80294 61 aa3.34□□□□□ -1.87
CPS1-210ENST00000518043 ATP5EP56381 51 aaPredicted RBP3.33□□□□□ -1.88
CPS1-210ENST00000518043 LCA10Q71F78 164 aa3.32□□□□□ -1.88
CPS1-210ENST00000518043 COA5Q86WW8 74 aa3.32□□□□□ -1.88
CPS1-210ENST00000518043 ACYP2P14621 99 aa3.3□□□□□ -1.88
CPS1-210ENST00000518043 S4R3F8 94 aa3.3□□□□□ -1.88
CPS1-210ENST00000518043 SERP1Q9Y6X1 66 aa3.27□□□□□ -1.89
CPS1-210ENST00000518043 LCE3EQ5T5B0 92 aa3.25□□□□□ -1.89
CPS1-210ENST00000518043 CHKB-CPT1BH3BT56 60 aa3.22□□□□□ -1.89
CPS1-210ENST00000518043 RPS28P62857 69 aaKnown RBP3.22□□□□□ -1.89
CPS1-210ENST00000518043 CSAG1Q6PB30 78 aa3.21□□□□□ -1.9
CPS1-210ENST00000518043 MT2AP02795 61 aa3.2□□□□□ -1.9
CPS1-210ENST00000518043 MT1FP04733 61 aa3.19□□□□□ -1.9
CPS1-210ENST00000518043 H0YAA0 97 aa3.18□□□□□ -1.9
CPS1-210ENST00000518043 KRTAP12-2P59991 146 aa3.18□□□□□ -1.9
CPS1-210ENST00000518043 M0R2T5 61 aa3.17□□□□□ -1.9
CPS1-210ENST00000518043 P0C880 135 aa3.17□□□□□ -1.9
CPS1-210ENST00000518043 SPTSSBQ8NFR3 76 aa3.17□□□□□ -1.9
CPS1-210ENST00000518043 LINC01558Q9Y6Z2 57 aa3.17□□□□□ -1.9
CPS1-210ENST00000518043 SMIM26A0A096LP01 95 aa3.16□□□□□ -1.9
CPS1-210ENST00000518043 Q1T7F1 81 aa3.14□□□□□ -1.91
CPS1-210ENST00000518043 ADM2Q7Z4H4 148 aa3.14□□□□□ -1.91
CPS1-210ENST00000518043 KRTAP13-4Q3LI77 160 aa3.11□□□□□ -1.91
CPS1-210ENST00000518043 A0A1B0GU69 56 aa3.09□□□□□ -1.91
CPS1-210ENST00000518043 Q5VV11 94 aa3.09□□□□□ -1.91
CPS1-210ENST00000518043 PRR15LQ9BU68 103 aa3.09□□□□□ -1.91
CPS1-210ENST00000518043 PSPHP1O15172 72 aa3.08□□□□□ -1.92
CPS1-210ENST00000518043 KRTAP10-10P60014 251 aa3.08□□□□□ -1.92
CPS1-210ENST00000518043 USH2AO75445 5202 aa3.07□□□□□ -1.92
CPS1-210ENST00000518043 V9GYY9 64 aa3.07□□□□□ -1.92
CPS1-210ENST00000518043 SPRR2GQ9BYE4 73 aa3.06□□□□□ -1.92
CPS1-210ENST00000518043 A0A1B0GU33 70 aa3.04□□□□□ -1.92
CPS1-210ENST00000518043 CRIPTQ9P021 101 aa3.04□□□□□ -1.92
CPS1-210ENST00000518043 SEC61GP60059 68 aa3.03□□□□□ -1.92
CPS1-210ENST00000518043 SPATA8Q6RVD6 105 aa3.03□□□□□ -1.92
CPS1-210ENST00000518043 M0QZ58 72 aa3.02□□□□□ -1.93
CPS1-210ENST00000518043 KRTAP19-8Q3LI54 63 aa3.02□□□□□ -1.93
CPS1-210ENST00000518043 SSPOA2VEC9 5147 aa3.02□□□□□ -1.93
CPS1-210ENST00000518043 MT1BP07438 61 aa3□□□□□ -1.93
CPS1-210ENST00000518043 R4GN34 69 aa3□□□□□ -1.93
CPS1-210ENST00000518043 KRTAP5-1Q6L8H4 278 aa2.98□□□□□ -1.93
CPS1-210ENST00000518043 UQCR11O14957 56 aa2.97□□□□□ -1.93
CPS1-210ENST00000518043 A0A0D9SG42 100 aa2.95□□□□□ -1.94
CPS1-210ENST00000518043 A6NED7 52 aa2.95□□□□□ -1.94
CPS1-210ENST00000518043 KRTAP12-1P59990 96 aa2.95□□□□□ -1.94
CPS1-210ENST00000518043 MIR22HGQ0VDD5 57 aa2.95□□□□□ -1.94
CPS1-210ENST00000518043 A6NN06 94 aa2.94□□□□□ -1.94
CPS1-210ENST00000518043 LINC01554Q52M75 96 aa2.94□□□□□ -1.94
CPS1-210ENST00000518043 CDC42SE1Q9NRR8 79 aa2.92□□□□□ -1.94
CPS1-210ENST00000518043 FSIP2Q5CZC0 6907 aa2.91□□□□□ -1.94
CPS1-210ENST00000518043 MT1XP80297 61 aa2.88□□□□□ -1.95
CPS1-210ENST00000518043 KRTAP19-6Q3LI70 58 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms